RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 NHP2Q9NX24 153 aaKnown RBP13.46□□□□□ -0.25
IKBKB-228ENST00000523517 NDUFS8O00217 210 aa13.46□□□□□ -0.25
IKBKB-228ENST00000523517 C2orf66Q6UXQ4 117 aa13.45□□□□□ -0.26
IKBKB-228ENST00000523517 PPP1R17O96001 155 aa13.45□□□□□ -0.26
IKBKB-228ENST00000523517 CLEC2AQ6UVW9 174 aa13.45□□□□□ -0.26
IKBKB-228ENST00000523517 NEGR1Q7Z3B1 354 aa13.45□□□□□ -0.26
IKBKB-228ENST00000523517 NXPH4O95158 308 aa13.44□□□□□ -0.26
IKBKB-228ENST00000523517 SRD5A1P18405 259 aa13.44□□□□□ -0.26
IKBKB-228ENST00000523517 POM121L12Q8N7R1 296 aa13.44□□□□□ -0.26
IKBKB-228ENST00000523517 AKAP6Q13023 2319 aa13.44□□□□□ -0.26
IKBKB-228ENST00000523517 IGHV4-30-2A0A087WSY4 118 aa13.44□□□□□ -0.26
IKBKB-228ENST00000523517 BAALCQ8WXS3 180 aa13.44□□□□□ -0.26
IKBKB-228ENST00000523517 CSTL1Q9H114 145 aa13.44□□□□□ -0.26
IKBKB-228ENST00000523517 KLLNB2CW77 178 aa13.43□□□□□ -0.26
IKBKB-228ENST00000523517 MSMBP08118 114 aa13.43□□□□□ -0.26
IKBKB-228ENST00000523517 CFHR3Q02985 330 aa13.43□□□□□ -0.26
IKBKB-228ENST00000523517 OR11H12B2RN74 326 aa13.43□□□□□ -0.26
IKBKB-228ENST00000523517 EDN2P20800 178 aa13.43□□□□□ -0.26
IKBKB-228ENST00000523517 OR11H1Q8NG94 326 aa13.43□□□□□ -0.26
IKBKB-228ENST00000523517 OR11H2Q8NH07 326 aa13.43□□□□□ -0.26
IKBKB-228ENST00000523517 HIST1H4GQ99525 98 aa13.43□□□□□ -0.26
IKBKB-228ENST00000523517 KIF25-AS1Q9Y6Z4 181 aa13.43□□□□□ -0.26
IKBKB-228ENST00000523517 ABCA2Q9BZC7 2435 aa13.42□□□□□ -0.26
IKBKB-228ENST00000523517 MYMXA0A1B0GTQ4 84 aa13.42□□□□□ -0.26
IKBKB-228ENST00000523517 K7EMT4 169 aa13.42□□□□□ -0.26
IKBKB-228ENST00000523517 ATP5J2P56134 94 aa13.42□□□□□ -0.26
IKBKB-228ENST00000523517 LINC00315P59091 139 aa13.42□□□□□ -0.26
IKBKB-228ENST00000523517 PRSS29PA6NIE9 313 aa13.41□□□□□ -0.26
IKBKB-228ENST00000523517 G3V4G9 280 aa13.41□□□□□ -0.26
IKBKB-228ENST00000523517 ID1P41134 155 aa13.41□□□□□ -0.26
IKBKB-228ENST00000523517 E9PLD3 99 aa13.4□□□□□ -0.26
IKBKB-228ENST00000523517 C12orf74Q32Q52 190 aa13.4□□□□□ -0.26
IKBKB-228ENST00000523517 FAM159AQ6UWV7 190 aa13.4□□□□□ -0.26
IKBKB-228ENST00000523517 TRBV7-3A0A075B6L6 115 aa13.4□□□□□ -0.26
IKBKB-228ENST00000523517 IGLL5B9A064 214 aa13.4□□□□□ -0.26
IKBKB-228ENST00000523517 LINC01619G3V211 115 aa13.4□□□□□ -0.26
IKBKB-228ENST00000523517 DCANP1Q8TF63 244 aa13.4□□□□□ -0.26
IKBKB-228ENST00000523517 IGHV4OR15-8A0A075B7B6 117 aa13.39□□□□□ -0.27
IKBKB-228ENST00000523517 A0A087WW49 117 aa13.39□□□□□ -0.27
IKBKB-228ENST00000523517 AVPP01185 164 aa13.39□□□□□ -0.27
IKBKB-228ENST00000523517 SAMD13Q5VXD3 122 aa13.39□□□□□ -0.27
IKBKB-228ENST00000523517 RPL32P62910 135 aaKnown RBP13.38□□□□□ -0.27
IKBKB-228ENST00000523517 COTL1Q14019 142 aa13.38□□□□□ -0.27
IKBKB-228ENST00000523517 WFDC12Q8WWY7 111 aa13.38□□□□□ -0.27
IKBKB-228ENST00000523517 ZFHX3Q15911 3703 aa13.38□□□□□ -0.27
IKBKB-228ENST00000523517 TMEM95Q3KNT9 176 aa13.38□□□□□ -0.27
IKBKB-228ENST00000523517 PRADC1Q9BSG0 188 aa13.38□□□□□ -0.27
IKBKB-228ENST00000523517 JPT2Q9H910 190 aa13.38□□□□□ -0.27
IKBKB-228ENST00000523517 DUSP14O95147 198 aaKnown RBP13.37□□□□□ -0.27
IKBKB-228ENST00000523517 CYSLTR1Q9Y271 337 aa13.37□□□□□ -0.27
IKBKB-228ENST00000523517 TRAV12-3A0A0B4J271 114 aa13.37□□□□□ -0.27
IKBKB-228ENST00000523517 LGALS1P09382 135 aaKnown RBP13.37□□□□□ -0.27
IKBKB-228ENST00000523517 SUMO4Q6EEV6 95 aa13.37□□□□□ -0.27
IKBKB-228ENST00000523517 ZNF479Q96JC4 524 aa13.37□□□□□ -0.27
IKBKB-228ENST00000523517 ZNF580Q9UK33 172 aa13.37□□□□□ -0.27
IKBKB-228ENST00000523517 CD7P09564 240 aa13.36□□□□□ -0.27
IKBKB-228ENST00000523517 POLR2KP53803 58 aaKnown RBP13.36□□□□□ -0.27
IKBKB-228ENST00000523517 B4DSR2 109 aa13.36□□□□□ -0.27
IKBKB-228ENST00000523517 CRYGDP07320 174 aa13.36□□□□□ -0.27
IKBKB-228ENST00000523517 PSMB8P28062 276 aa13.36□□□□□ -0.27
IKBKB-228ENST00000523517 FOXI2Q6ZQN5 318 aa13.36□□□□□ -0.27
IKBKB-228ENST00000523517 A0A087WWL8 130 aa13.35□□□□□ -0.27
IKBKB-228ENST00000523517 TSHBP01222 138 aa13.35□□□□□ -0.27
IKBKB-228ENST00000523517 ZFP2Q6ZN57 461 aa13.35□□□□□ -0.27
IKBKB-228ENST00000523517 A0A1B0GWB2 263 aa13.35□□□□□ -0.27
IKBKB-228ENST00000523517 RIPPLY3P57055 190 aa13.35□□□□□ -0.27
IKBKB-228ENST00000523517 TP53TG1Q9Y2A0 90 aa13.35□□□□□ -0.27
IKBKB-228ENST00000523517 IGIPA6NJ69 53 aa13.34□□□□□ -0.27
IKBKB-228ENST00000523517 VCYO14598 125 aa13.34□□□□□ -0.27
IKBKB-228ENST00000523517 LINC01549A6NIU2 74 aa13.34□□□□□ -0.27
IKBKB-228ENST00000523517 F5H697 171 aa13.34□□□□□ -0.27
IKBKB-228ENST00000523517 ZNF815PA8K554 130 aa13.33□□□□□ -0.28
IKBKB-228ENST00000523517 ZNF688P0C7X2 276 aa13.33□□□□□ -0.28
IKBKB-228ENST00000523517 RRN3P1Q2M238 152 aa13.33□□□□□ -0.28
IKBKB-228ENST00000523517 RPL24P83731 157 aaKnown RBP13.32□□□□□ -0.28
IKBKB-228ENST00000523517 SCGB2A2Q13296 93 aa13.32□□□□□ -0.28
IKBKB-228ENST00000523517 DEFB104AQ8WTQ1 72 aa13.32□□□□□ -0.28
IKBKB-228ENST00000523517 ODF3Q96PU9 254 aa13.32□□□□□ -0.28
IKBKB-228ENST00000523517 KIR2DL4Q99706 377 aa13.32□□□□□ -0.28
IKBKB-228ENST00000523517 IGLV4-69A0A075B6H9 119 aa13.32□□□□□ -0.28
IKBKB-228ENST00000523517 IGHV3-16A0A0C4DH30 117 aa13.32□□□□□ -0.28
IKBKB-228ENST00000523517 C11orf86A6NJI1 115 aa13.32□□□□□ -0.28
IKBKB-228ENST00000523517 IGHV4-59P01825 116 aa13.32□□□□□ -0.28
IKBKB-228ENST00000523517 COX6B1P14854 86 aa13.32□□□□□ -0.28
IKBKB-228ENST00000523517 C9orf85Q96MD7 179 aa13.32□□□□□ -0.28
IKBKB-228ENST00000523517 NCOR2Q9Y618 2525 aa13.32□□□□□ -0.28
IKBKB-228ENST00000523517 CHD8Q9HCK8 2581 aa13.31□□□□□ -0.28
IKBKB-228ENST00000523517 C10orf99Q6UWK7 81 aa13.31□□□□□ -0.28
IKBKB-228ENST00000523517 TMEM141Q96I45 108 aa13.31□□□□□ -0.28
IKBKB-228ENST00000523517 ITPR1Q14643 2758 aa13.31□□□□□ -0.28
IKBKB-228ENST00000523517 CELSR1Q9NYQ6 3014 aa13.31□□□□□ -0.28
IKBKB-228ENST00000523517 SDHAF1A6NFY7 115 aa13.31□□□□□ -0.28
IKBKB-228ENST00000523517 LGALS9O00182 355 aa13.31□□□□□ -0.28
IKBKB-228ENST00000523517 GATA3P23771 443 aa13.31□□□□□ -0.28
IKBKB-228ENST00000523517 RPL39P62891 51 aaKnown RBP13.31□□□□□ -0.28
IKBKB-228ENST00000523517 PMVKQ15126 192 aa13.31□□□□□ -0.28
IKBKB-228ENST00000523517 DEFB112Q30KQ8 113 aa13.31□□□□□ -0.28
IKBKB-228ENST00000523517 CD300EQ496F6 205 aaPredicted RBP13.31□□□□□ -0.28
IKBKB-228ENST00000523517 PAPPA-AS1Q5QFB9 102 aa13.31□□□□□ -0.28
IKBKB-228ENST00000523517 SPTAN1Q13813 2472 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms