RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 ZNF773Q6PK81 442 aa2.66□□□□□ -1.98
CPNE3-206ENST00000523469 Q6ZRU5 148 aa2.66□□□□□ -1.98
CPNE3-206ENST00000523469 ORMDL3Q8N138 153 aa2.66□□□□□ -1.98
CPNE3-206ENST00000523469 STX19Q8N4C7 294 aa2.66□□□□□ -1.98
CPNE3-206ENST00000523469 SLC25A29Q8N8R3 303 aa2.66□□□□□ -1.98
CPNE3-206ENST00000523469 ACOT12Q8WYK0 555 aa2.66□□□□□ -1.98
CPNE3-206ENST00000523469 CPNE2Q96FN4 548 aaPredicted RBP2.66□□□□□ -1.98
CPNE3-206ENST00000523469 SFRP2Q96HF1 295 aa2.66□□□□□ -1.98
CPNE3-206ENST00000523469 YPEL4Q96NS1 127 aa2.66□□□□□ -1.98
CPNE3-206ENST00000523469 CMSS1Q9BQ75 279 aaKnown RBP2.66□□□□□ -1.98
CPNE3-206ENST00000523469 ZNF436Q9C0F3 470 aaPredicted RBP2.66□□□□□ -1.98
CPNE3-206ENST00000523469 DAZ1Q9NQZ3 744 aaKnown RBP2.66□□□□□ -1.98
CPNE3-206ENST00000523469 TRAPPC2LQ9UL33 140 aa2.66□□□□□ -1.98
CPNE3-206ENST00000523469 TRAV3A0A0B4J244 114 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 KNCNA6PVL3 124 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 K7EPK0 472 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 IFNA1P01562 189 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 APOA2P02652 100 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 C1QBP02746 253 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 MAS1P04201 325 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 SHBGP04278 402 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 CRYGDP07320 174 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 SCGB1C2P0DMR2 95 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 HLA-DRB3P79483 266 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 JOSD1Q15040 202 aaPredicted RBP2.65□□□□□ -1.99
CPNE3-206ENST00000523469 RPL39P5Q59GN2 51 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 LINC01590Q5TEZ4 76 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 FAM78BQ5VT40 261 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 RPL13AP3Q6NVV1 102 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 SCXQ7RTU7 201 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 SCGB1C1Q8TD33 95 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 RBPMSQ93062 196 aaKnown RBP2.65□□□□□ -1.99
CPNE3-206ENST00000523469 ACY3Q96HD9 319 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 DIRAS2Q96HU8 199 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 ENY2Q9NPA8 101 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 OR52A1Q9UKL2 312 aa2.65□□□□□ -1.99
CPNE3-206ENST00000523469 ZNF706Q9Y5V0 76 aaPredicted RBP2.65□□□□□ -1.99
CPNE3-206ENST00000523469 TRBV7-1A0A0A6YYK4 115 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 PSCAO43653 123 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 IGKV1-16P04430 117 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 LGALS3P17931 250 aaKnown RBP2.64□□□□□ -1.99
CPNE3-206ENST00000523469 GTF2A1P52655 376 aaPredicted RBP2.64□□□□□ -1.99
CPNE3-206ENST00000523469 FABP5Q01469 135 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 PIGYQ3MUY2 71 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 SP6Q3SY56 376 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 MORN2Q502X0 79 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 C1orf194Q5T5A4 169 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 ADM2Q7Z4H4 148 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 ZNF555Q8NEP9 628 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 OR4K15Q8NH41 348 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 OR51H1Q8NH63 302 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 OR10J5Q8NHC4 309 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 MCFD2Q8NI22 146 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 GNPDA2Q8TDQ7 276 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 PP6455Q8WZ26 134 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 BORCS7Q96B45 105 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 UPK3BQ9BT76 320 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 TSSK6Q9BXA6 273 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 EIF5A2Q9GZV4 153 aaKnown RBP2.64□□□□□ -1.99
CPNE3-206ENST00000523469 BIN3Q9NQY0 253 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 RABAC1Q9UI14 185 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 JPT1Q9UK76 154 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 MRPS16Q9Y3D3 137 aaKnown RBP2.64□□□□□ -1.99
CPNE3-206ENST00000523469 DNAH8Q96JB1 4490 aa2.64□□□□□ -1.99
CPNE3-206ENST00000523469 A0A1B0GV50 99 aa2.63□□□□□ -1.99
CPNE3-206ENST00000523469 C9JQL5 133 aa2.63□□□□□ -1.99
CPNE3-206ENST00000523469 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.63□□□□□ -1.99
CPNE3-206ENST00000523469 GADD45GO95257 159 aa2.63□□□□□ -1.99
CPNE3-206ENST00000523469 DHFRP00374 187 aa2.63□□□□□ -1.99
CPNE3-206ENST00000523469 LPCAT3Q6P1A2 487 aa2.63□□□□□ -1.99
CPNE3-206ENST00000523469 Q6ZSA8 131 aa2.63□□□□□ -1.99
CPNE3-206ENST00000523469 FA2HQ7L5A8 372 aa2.63□□□□□ -1.99
CPNE3-206ENST00000523469 TCF24Q7RTU0 167 aa2.63□□□□□ -1.99
CPNE3-206ENST00000523469 DAZ4Q86SG3 579 aaKnown RBP2.63□□□□□ -1.99
CPNE3-206ENST00000523469 PDPNQ86YL7 162 aa2.63□□□□□ -1.99
CPNE3-206ENST00000523469 SMIM20Q8N5G0 67 aa2.63□□□□□ -1.99
CPNE3-206ENST00000523469 TMEM75Q8N9X5 138 aa2.63□□□□□ -1.99
CPNE3-206ENST00000523469 RHPN1-AS1Q9BWJ2 59 aa2.63□□□□□ -1.99
CPNE3-206ENST00000523469 SND1-IT1Q9HBX3 110 aa2.63□□□□□ -1.99
CPNE3-206ENST00000523469 BAIAP2Q9UQB8 552 aa2.63□□□□□ -1.99
CPNE3-206ENST00000523469 PKIGQ9Y2B9 76 aa2.63□□□□□ -1.99
CPNE3-206ENST00000523469 R4GMQ9 66 aa2.63□□□□□ -1.99
CPNE3-206ENST00000523469 LPAP08519 4548 aa2.63□□□□□ -1.99
CPNE3-206ENST00000523469 TRAV8-1A0A0A6YYK1 113 aa2.62□□□□□ -1.99
CPNE3-206ENST00000523469 IGKV1-9A0A0C4DH69 117 aa2.62□□□□□ -1.99
CPNE3-206ENST00000523469 LOC107986453A0A1B0GWG9 222 aa2.62□□□□□ -1.99
CPNE3-206ENST00000523469 PDE6DO43924 150 aa2.62□□□□□ -1.99
CPNE3-206ENST00000523469 CREBL2O60519 120 aaPredicted RBP2.62□□□□□ -1.99
CPNE3-206ENST00000523469 YPEL1O60688 119 aa2.62□□□□□ -1.99
CPNE3-206ENST00000523469 ATG12O94817 140 aa2.62□□□□□ -1.99
CPNE3-206ENST00000523469 DEFB130BP0DP73 79 aa2.62□□□□□ -1.99
CPNE3-206ENST00000523469 DEFB130AP0DP74 79 aa2.62□□□□□ -1.99
CPNE3-206ENST00000523469 DEFA4P12838 97 aa2.62□□□□□ -1.99
CPNE3-206ENST00000523469 CCL1P22362 96 aa2.62□□□□□ -1.99
CPNE3-206ENST00000523469 ATP5G3P48201 142 aa2.62□□□□□ -1.99
CPNE3-206ENST00000523469 INPP1P49441 399 aa2.62□□□□□ -1.99
CPNE3-206ENST00000523469 PSMB3P49720 205 aa2.62□□□□□ -1.99
CPNE3-206ENST00000523469 SMIM11AP58511 58 aa2.62□□□□□ -1.99
CPNE3-206ENST00000523469 IAH1Q2TAA2 248 aaPredicted RBP2.62□□□□□ -1.99
CPNE3-206ENST00000523469 VMA21Q3ZAQ7 101 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms