RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 Q86TA4 180 aa8.37□□□□□ -1.07
VEGFA-223ENST00000523125 NKX6-2Q9C056 277 aaPredicted RBP8.37□□□□□ -1.07
VEGFA-223ENST00000523125 MAP1LC3BQ9GZQ8 125 aa8.37□□□□□ -1.07
VEGFA-223ENST00000523125 FHITP49789 147 aa8.36□□□□□ -1.07
VEGFA-223ENST00000523125 PPT1P50897 306 aa8.36□□□□□ -1.07
VEGFA-223ENST00000523125 Q6ZSN1 163 aa8.36□□□□□ -1.07
VEGFA-223ENST00000523125 COX8CQ7Z4L0 72 aa8.36□□□□□ -1.07
VEGFA-223ENST00000523125 KCNRGQ8N5I3 272 aa8.36□□□□□ -1.07
VEGFA-223ENST00000523125 NHLRC2Q8NBF2 726 aa8.36□□□□□ -1.07
VEGFA-223ENST00000523125 OR11H4Q8NGC9 324 aa8.36□□□□□ -1.07
VEGFA-223ENST00000523125 HIST1H2BAQ96A08 127 aa8.36□□□□□ -1.07
VEGFA-223ENST00000523125 ZC2HC1AQ96GY0 325 aa8.36□□□□□ -1.07
VEGFA-223ENST00000523125 MSRB1Q9NZV6 116 aa8.36□□□□□ -1.07
VEGFA-223ENST00000523125 EVI2AP22794 236 aa8.35□□□□□ -1.07
VEGFA-223ENST00000523125 FUSP35637 526 aaKnown RBP eCLIP8.35□□□□□ -1.073e-8■□□□□ 10.5
VEGFA-223ENST00000523125 ZNF345Q14585 488 aa8.35□□□□□ -1.07
VEGFA-223ENST00000523125 NFE4Q86UQ8 179 aa8.35□□□□□ -1.07
VEGFA-223ENST00000523125 IGHV3-38A0A0C4DH36 116 aa8.34□□□□□ -1.07
VEGFA-223ENST00000523125 KRBOX1C9JBD0 128 aa8.34□□□□□ -1.07
VEGFA-223ENST00000523125 RHOHQ15669 191 aa8.34□□□□□ -1.07
VEGFA-223ENST00000523125 PIK3CD-AS1Q5SR53 167 aa8.34□□□□□ -1.07
VEGFA-223ENST00000523125 DNLZQ5SXM8 178 aa8.34□□□□□ -1.07
VEGFA-223ENST00000523125 UFSP1Q6NVU6 142 aa8.34□□□□□ -1.07
VEGFA-223ENST00000523125 MAPKAPK5-AS1Q8N8E1 139 aa8.34□□□□□ -1.07
VEGFA-223ENST00000523125 PRADC1Q9BSG0 188 aa8.34□□□□□ -1.07
VEGFA-223ENST00000523125 PARLQ9H300 379 aa8.34□□□□□ -1.07
VEGFA-223ENST00000523125 JPT2Q9H910 190 aa8.34□□□□□ -1.07
VEGFA-223ENST00000523125 IL36BQ9NZH7 164 aa8.34□□□□□ -1.07
VEGFA-223ENST00000523125 Q9UF83 564 aa8.34□□□□□ -1.07
VEGFA-223ENST00000523125 ZFP30Q9Y2G7 519 aa8.34□□□□□ -1.07
VEGFA-223ENST00000523125 A0A087WTM6 91 aa8.33□□□□□ -1.08
VEGFA-223ENST00000523125 TRBV6-1A0A0K0K1D8 114 aa8.33□□□□□ -1.08
VEGFA-223ENST00000523125 HMSDA8MTL9 139 aa8.33□□□□□ -1.08
VEGFA-223ENST00000523125 B4DEV8 164 aa8.33□□□□□ -1.08
VEGFA-223ENST00000523125 SH2D1AO60880 128 aa8.33□□□□□ -1.08
VEGFA-223ENST00000523125 CRYGDP07320 174 aa8.33□□□□□ -1.08
VEGFA-223ENST00000523125 MGST1P10620 155 aaKnown RBP8.33□□□□□ -1.08
VEGFA-223ENST00000523125 S100A4P26447 101 aaKnown RBP8.33□□□□□ -1.08
VEGFA-223ENST00000523125 ASIPP42127 132 aa8.33□□□□□ -1.08
VEGFA-223ENST00000523125 ERVFC1-1P60608 527 aa8.33□□□□□ -1.08
VEGFA-223ENST00000523125 LINC01556Q5JQF7 62 aa8.33□□□□□ -1.08
VEGFA-223ENST00000523125 ZFP2Q6ZN57 461 aa8.33□□□□□ -1.08
VEGFA-223ENST00000523125 FMC1Q96HJ9 113 aa8.33□□□□□ -1.08
VEGFA-223ENST00000523125 SAMD10Q9BYL1 202 aa8.33□□□□□ -1.08
VEGFA-223ENST00000523125 PGPEP1Q9NXJ5 209 aa8.33□□□□□ -1.08
VEGFA-223ENST00000523125 A8MWV9 139 aa8.32□□□□□ -1.08
VEGFA-223ENST00000523125 M0R036 132 aa8.32□□□□□ -1.08
VEGFA-223ENST00000523125 LTAP01374 205 aa8.32□□□□□ -1.08
VEGFA-223ENST00000523125 ARMS2P0C7Q2 107 aa8.32□□□□□ -1.08
VEGFA-223ENST00000523125 SEC11BP0C7V7 166 aa8.32□□□□□ -1.08
VEGFA-223ENST00000523125 LINC00694P0DN24 101 aa8.32□□□□□ -1.08
VEGFA-223ENST00000523125 ZNF674Q2M3X9 581 aa8.32□□□□□ -1.08
VEGFA-223ENST00000523125 DMRTA1Q5VZB9 504 aa8.32□□□□□ -1.08
VEGFA-223ENST00000523125 CST9LP1Q5W188 147 aa8.32□□□□□ -1.08
VEGFA-223ENST00000523125 STOML3Q8TAV4 291 aa8.32□□□□□ -1.08
VEGFA-223ENST00000523125 MBD3L1Q8WWY6 194 aa8.32□□□□□ -1.08
VEGFA-223ENST00000523125 TCEAL7Q9BRU2 100 aa8.32□□□□□ -1.08
VEGFA-223ENST00000523125 GTSF1LQ9H1H1 148 aa8.32□□□□□ -1.08
VEGFA-223ENST00000523125 A0A0D9SG52 128 aa8.31□□□□□ -1.08
VEGFA-223ENST00000523125 GRIFINA4D1Z8 144 aa8.31□□□□□ -1.08
VEGFA-223ENST00000523125 IBA57-AS1B1ANH7 110 aa8.31□□□□□ -1.08
VEGFA-223ENST00000523125 H3BVH4 76 aa8.31□□□□□ -1.08
VEGFA-223ENST00000523125 PAGE4O60829 102 aa8.31□□□□□ -1.08
VEGFA-223ENST00000523125 UBE2G1P62253 170 aa8.31□□□□□ -1.08
VEGFA-223ENST00000523125 LGALSLQ3ZCW2 172 aaPredicted RBP8.31□□□□□ -1.08
VEGFA-223ENST00000523125 FAM162BQ5T6X4 162 aa8.31□□□□□ -1.08
VEGFA-223ENST00000523125 LELP1Q5T871 98 aa8.31□□□□□ -1.08
VEGFA-223ENST00000523125 Q8N1X5 172 aa8.31□□□□□ -1.08
VEGFA-223ENST00000523125 C10orf126Q8N4M7 172 aa8.31□□□□□ -1.08
VEGFA-223ENST00000523125 ATP6V0E2Q8NHE4 81 aa8.31□□□□□ -1.08
VEGFA-223ENST00000523125 SFT2D1Q8WV19 159 aa8.31□□□□□ -1.08
VEGFA-223ENST00000523125 SCRT2Q9NQ03 307 aa8.31□□□□□ -1.08
VEGFA-223ENST00000523125 TRAV8-6A0A0B4J262 113 aa8.3□□□□□ -1.08
VEGFA-223ENST00000523125 UMAD1C9J7I0 102 aa8.3□□□□□ -1.08
VEGFA-223ENST00000523125 EREGO14944 169 aa8.3□□□□□ -1.08
VEGFA-223ENST00000523125 BCL2L11O43521 198 aa8.3□□□□□ -1.08
VEGFA-223ENST00000523125 LINC01559Q495D7 138 aa8.3□□□□□ -1.08
VEGFA-223ENST00000523125 OR10J3Q5JRS4 329 aa8.3□□□□□ -1.08
VEGFA-223ENST00000523125 CDPF1Q6NVV7 123 aa8.3□□□□□ -1.08
VEGFA-223ENST00000523125 C14orf178Q8N769 122 aaPredicted RBP8.3□□□□□ -1.08
VEGFA-223ENST00000523125 FAM213BQ8TBF2 198 aa8.3□□□□□ -1.08
VEGFA-223ENST00000523125 LRCOL1A6NCL2 159 aa8.29□□□□□ -1.08
VEGFA-223ENST00000523125 GAGE12JA6NER3 117 aa8.29□□□□□ -1.08
VEGFA-223ENST00000523125 GAGE1Q13065 139 aa8.29□□□□□ -1.08
VEGFA-223ENST00000523125 GAGE4Q13068 117 aa8.29□□□□□ -1.08
VEGFA-223ENST00000523125 GAGE5Q13069 117 aa8.29□□□□□ -1.08
VEGFA-223ENST00000523125 GAGE13Q4V321 117 aa8.29□□□□□ -1.08
VEGFA-223ENST00000523125 Q8N3U1 123 aa8.29□□□□□ -1.08
VEGFA-223ENST00000523125 ZNF471Q9BX82 626 aaPredicted RBP8.29□□□□□ -1.08
VEGFA-223ENST00000523125 BOLA1Q9Y3E2 137 aa8.29□□□□□ -1.08
VEGFA-223ENST00000523125 TMSB15BA0A087X1C1 80 aa8.28□□□□□ -1.08
VEGFA-223ENST00000523125 A0A1B0GV50 99 aa8.28□□□□□ -1.08
VEGFA-223ENST00000523125 SCO2A0A1W2PP80 73 aa8.28□□□□□ -1.08
VEGFA-223ENST00000523125 KANTRA0A1W2PQU2 76 aa8.28□□□□□ -1.08
VEGFA-223ENST00000523125 IGHV3-30P01768 117 aa8.28□□□□□ -1.08
VEGFA-223ENST00000523125 IGHV3-33P01772 117 aa8.28□□□□□ -1.08
VEGFA-223ENST00000523125 IGHV3-30-3P0DP02 117 aa8.28□□□□□ -1.08
VEGFA-223ENST00000523125 IGHV3-30-5P0DP03 117 aa8.28□□□□□ -1.08
VEGFA-223ENST00000523125 AKR1C3P42330 323 aa8.28□□□□□ -1.08
VEGFA-223ENST00000523125 SFRP2Q96HF1 295 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms