RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 YTHDF2Q9Y5A9 579 aaKnown RBP4.53□□□□□ -1.68
SDCBP-210ENST00000522843 FAT4Q6V0I7 4981 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 TRAV5A0A0B4J249 113 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 SMIM9A6NGZ8 99 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 F8W036 122 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 H3BMM0 161 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 IL4P05112 153 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 SFTA3P0C7M3 94 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 DNAH10OSP0CZ25 163 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 IGLC2P0DOY2 106 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 NPPCP23582 126 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 MEOX2P50222 304 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 FXYD7P58549 80 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 LINC00315P59091 139 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 DEFB1P60022 68 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 USF2Q15853 346 aaPredicted RBP4.52□□□□□ -1.69
SDCBP-210ENST00000522843 GDF5OSQ5U4N7 250 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 BPIFA4PQ86YQ2 179 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 C1orf158Q8N1D5 194 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 SVBPQ8N300 66 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 RXFP4Q8TDU9 374 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 KLF12Q9Y4X4 402 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 PUS1Q9Y606 427 aaKnown RBP eCLIP4.52□□□□□ -1.69
SDCBP-210ENST00000522843 LY96Q9Y6Y9 160 aa4.52□□□□□ -1.69
SDCBP-210ENST00000522843 TRBV19A0A075B6N1 114 aa4.51□□□□□ -1.69
SDCBP-210ENST00000522843 IGHV3OR16-12A0A075B7B8 117 aa4.51□□□□□ -1.69
SDCBP-210ENST00000522843 A0A087X0K7 114 aa4.51□□□□□ -1.69
SDCBP-210ENST00000522843 TRAV34A0A0B4J273 112 aa4.51□□□□□ -1.69
SDCBP-210ENST00000522843 TRBV6-1A0A0K0K1D8 114 aa4.51□□□□□ -1.69
SDCBP-210ENST00000522843 TEX48A0A1B0GUV7 120 aa4.51□□□□□ -1.69
SDCBP-210ENST00000522843 B4DEV8 164 aa4.51□□□□□ -1.69
SDCBP-210ENST00000522843 HMGB3O15347 200 aaKnown RBP4.51□□□□□ -1.69
SDCBP-210ENST00000522843 SNAPINO95295 136 aa4.51□□□□□ -1.69
SDCBP-210ENST00000522843 PRM2P04554 102 aa4.51□□□□□ -1.69
SDCBP-210ENST00000522843 S100A9P06702 114 aaKnown RBP4.51□□□□□ -1.69
SDCBP-210ENST00000522843 RPL7P18124 248 aaKnown RBP4.51□□□□□ -1.69
SDCBP-210ENST00000522843 CCL18P55774 89 aa4.51□□□□□ -1.69
SDCBP-210ENST00000522843 LYZP61626 148 aa4.51□□□□□ -1.69
SDCBP-210ENST00000522843 DAD1P61803 113 aa4.51□□□□□ -1.69
SDCBP-210ENST00000522843 SNRPEP62304 92 aaKnown RBP4.51□□□□□ -1.69
SDCBP-210ENST00000522843 PNRC1Q12796 327 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-210ENST00000522843 PSMG4Q5JS54 123 aa4.51□□□□□ -1.69
SDCBP-210ENST00000522843 CYB561D1Q8N8Q1 229 aa4.51□□□□□ -1.69
SDCBP-210ENST00000522843 HIST1H2BAQ96A08 127 aa4.51□□□□□ -1.69
SDCBP-210ENST00000522843 UHRF2Q96PU4 802 aa4.51□□□□□ -1.69
SDCBP-210ENST00000522843 C1QTNF4Q9BXJ3 329 aa4.51□□□□□ -1.69
SDCBP-210ENST00000522843 SDF2L1Q9HCN8 221 aa4.51□□□□□ -1.69
SDCBP-210ENST00000522843 TMEM242Q9NWH2 141 aa4.51□□□□□ -1.69
SDCBP-210ENST00000522843 ZNF586Q9NXT0 402 aa4.51□□□□□ -1.69
SDCBP-210ENST00000522843 A0A087WWC5 75 aa4.5□□□□□ -1.69
SDCBP-210ENST00000522843 A0A1W2PPQ1 181 aa4.5□□□□□ -1.69
SDCBP-210ENST00000522843 A0A1W2PS18 150 aa4.5□□□□□ -1.69
SDCBP-210ENST00000522843 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
SDCBP-210ENST00000522843 C9JCJ5 164 aa4.5□□□□□ -1.69
SDCBP-210ENST00000522843 H3BQ15 152 aa4.5□□□□□ -1.69
SDCBP-210ENST00000522843 OR7C2O60412 319 aa4.5□□□□□ -1.69
SDCBP-210ENST00000522843 EIF3GO75821 320 aaKnown RBP eCLIP4.5□□□□□ -1.69
SDCBP-210ENST00000522843 IGKV3-20P01619 116 aa4.5□□□□□ -1.69
SDCBP-210ENST00000522843 APOC3P02656 99 aa4.5□□□□□ -1.69
SDCBP-210ENST00000522843 TAS2R60P59551 318 aa4.5□□□□□ -1.69
SDCBP-210ENST00000522843 KRTAP10-4P60372 401 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-210ENST00000522843 SEC61BP60468 96 aaKnown RBP4.5□□□□□ -1.69
SDCBP-210ENST00000522843 PSG9Q00887 426 aa4.5□□□□□ -1.69
SDCBP-210ENST00000522843 TMEM241Q24JQ0 296 aa4.5□□□□□ -1.69
SDCBP-210ENST00000522843 TTC32Q5I0X7 151 aa4.5□□□□□ -1.69
SDCBP-210ENST00000522843 TVP23CQ96ET8 276 aa4.5□□□□□ -1.69
SDCBP-210ENST00000522843 SMIM12Q96EX1 92 aa4.5□□□□□ -1.69
SDCBP-210ENST00000522843 METTL26Q96S19 204 aa4.5□□□□□ -1.69
SDCBP-210ENST00000522843 UPK3BQ9BT76 320 aa4.5□□□□□ -1.69
SDCBP-210ENST00000522843 TMEM231Q9H6L2 316 aa4.5□□□□□ -1.69
SDCBP-210ENST00000522843 OTORQ9NRC9 128 aa4.5□□□□□ -1.69
SDCBP-210ENST00000522843 EPDR1Q9UM22 224 aa4.5□□□□□ -1.69
SDCBP-210ENST00000522843 A0A087WTM6 91 aa4.49□□□□□ -1.69
SDCBP-210ENST00000522843 A0A1B0GV50 99 aa4.49□□□□□ -1.69
SDCBP-210ENST00000522843 SERTM2A0A1B0GWG4 89 aa4.49□□□□□ -1.69
SDCBP-210ENST00000522843 HELTA6NFD8 242 aa4.49□□□□□ -1.69
SDCBP-210ENST00000522843 FBLL1A6NHQ2 334 aaKnown RBP4.49□□□□□ -1.69
SDCBP-210ENST00000522843 GGTLC3B5MD39 225 aa4.49□□□□□ -1.69
SDCBP-210ENST00000522843 PYYP10082 97 aa4.49□□□□□ -1.69
SDCBP-210ENST00000522843 HLA-DRB4P13762 266 aa4.49□□□□□ -1.69
SDCBP-210ENST00000522843 ATP5G3P48201 142 aa4.49□□□□□ -1.69
SDCBP-210ENST00000522843 UBE2L3P68036 154 aaKnown RBP4.49□□□□□ -1.69
SDCBP-210ENST00000522843 RHEBQ15382 184 aa4.49□□□□□ -1.69
SDCBP-210ENST00000522843 TMEM183BQ1AE95 376 aa4.49□□□□□ -1.69
SDCBP-210ENST00000522843 ESRGQ1W209 222 aa4.49□□□□□ -1.69
SDCBP-210ENST00000522843 SIGLEC15Q6ZMC9 328 aa4.49□□□□□ -1.69
SDCBP-210ENST00000522843 COX8CQ7Z4L0 72 aa4.49□□□□□ -1.69
SDCBP-210ENST00000522843 C5orf17Q8NAS9 161 aa4.49□□□□□ -1.69
SDCBP-210ENST00000522843 DEFB104AQ8WTQ1 72 aa4.49□□□□□ -1.69
SDCBP-210ENST00000522843 MRPL53Q96EL3 112 aaKnown RBP4.49□□□□□ -1.69
SDCBP-210ENST00000522843 NARS2Q96I59 477 aaKnown RBP4.49□□□□□ -1.69
SDCBP-210ENST00000522843 NAT8Q9UHE5 227 aa4.49□□□□□ -1.69
SDCBP-210ENST00000522843 PRELID1Q9Y255 219 aa4.49□□□□□ -1.69
SDCBP-210ENST00000522843 HLA-DRB4X5D2U9 266 aa4.49□□□□□ -1.69
SDCBP-210ENST00000522843 PLAC8L1A1L4L8 177 aa4.48□□□□□ -1.69
SDCBP-210ENST00000522843 PGPA6NDG6 321 aa4.48□□□□□ -1.69
SDCBP-210ENST00000522843 ZNF727A8MUV8 499 aa4.48□□□□□ -1.69
SDCBP-210ENST00000522843 F5H768 121 aa4.48□□□□□ -1.69
SDCBP-210ENST00000522843 OR10J4P0C629 311 aa4.48□□□□□ -1.69
SDCBP-210ENST00000522843 GALR1P47211 349 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 201.9 ms