RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 RGS21Q2M5E4 152 aa13.99□□□□□ -0.17
SDCBP-209ENST00000522243 CYTL1Q9NRR1 136 aa13.99□□□□□ -0.17
SDCBP-209ENST00000522243 A0A087WTM6 91 aa13.98□□□□□ -0.17
SDCBP-209ENST00000522243 TRBV6-4A0A1B0GX49 114 aa13.98□□□□□ -0.17
SDCBP-209ENST00000522243 S100A4P26447 101 aaKnown RBP13.98□□□□□ -0.17
SDCBP-209ENST00000522243 PGPEP1Q9NXJ5 209 aa13.98□□□□□ -0.17
SDCBP-209ENST00000522243 IGHV3-38A0A0C4DH36 116 aa13.97□□□□□ -0.17
SDCBP-209ENST00000522243 MAP1LC3B2A6NCE7 125 aa13.97□□□□□ -0.17
SDCBP-209ENST00000522243 FABP5P3A8MUU1 101 aa13.97□□□□□ -0.17
SDCBP-209ENST00000522243 K7EP13 123 aa13.97□□□□□ -0.17
SDCBP-209ENST00000522243 CIDEAO60543 219 aa13.97□□□□□ -0.17
SDCBP-209ENST00000522243 TIRAPP58753 221 aa13.97□□□□□ -0.17
SDCBP-209ENST00000522243 Q86TA4 180 aa13.97□□□□□ -0.17
SDCBP-209ENST00000522243 PTH2Q96A98 100 aa13.97□□□□□ -0.17
SDCBP-209ENST00000522243 MAP1LC3BQ9GZQ8 125 aa13.97□□□□□ -0.17
SDCBP-209ENST00000522243 OR10J3Q5JRS4 329 aa13.96□□□□□ -0.17
SDCBP-209ENST00000522243 Q8N1X5 172 aa13.96□□□□□ -0.17
SDCBP-209ENST00000522243 C10orf126Q8N4M7 172 aa13.96□□□□□ -0.17
SDCBP-209ENST00000522243 SCRT2Q9NQ03 307 aa13.96□□□□□ -0.17
SDCBP-209ENST00000522243 TRAV8-6A0A0B4J262 113 aa13.95□□□□□ -0.18
SDCBP-209ENST00000522243 ASIPP42127 132 aa13.95□□□□□ -0.18
SDCBP-209ENST00000522243 LGALSLQ3ZCW2 172 aaPredicted RBP13.95□□□□□ -0.18
SDCBP-209ENST00000522243 Q6ZSN1 163 aa13.95□□□□□ -0.18
SDCBP-209ENST00000522243 HIST1H2BAQ96A08 127 aa13.95□□□□□ -0.18
SDCBP-209ENST00000522243 PARLQ9H300 379 aa13.95□□□□□ -0.18
SDCBP-209ENST00000522243 M0R036 132 aa13.94□□□□□ -0.18
SDCBP-209ENST00000522243 IGHV3-30P01768 117 aa13.94□□□□□ -0.18
SDCBP-209ENST00000522243 IGHV3-33P01772 117 aa13.94□□□□□ -0.18
SDCBP-209ENST00000522243 IGHV3-30-3P0DP02 117 aa13.94□□□□□ -0.18
SDCBP-209ENST00000522243 IGHV3-30-5P0DP03 117 aa13.94□□□□□ -0.18
SDCBP-209ENST00000522243 MGST1P10620 155 aaKnown RBP13.94□□□□□ -0.18
SDCBP-209ENST00000522243 CRIP1P50238 77 aa13.94□□□□□ -0.18
SDCBP-209ENST00000522243 ZC2HC1AQ96GY0 325 aa13.94□□□□□ -0.18
SDCBP-209ENST00000522243 NKX6-2Q9C056 277 aaPredicted RBP13.94□□□□□ -0.18
SDCBP-209ENST00000522243 JPT2Q9H910 190 aa13.94□□□□□ -0.18
SDCBP-209ENST00000522243 B4DEV8 164 aa13.93□□□□□ -0.18
SDCBP-209ENST00000522243 H3BVH4 76 aa13.93□□□□□ -0.18
SDCBP-209ENST00000522243 FHITP49789 147 aa13.93□□□□□ -0.18
SDCBP-209ENST00000522243 ATP6V0E2Q8NHE4 81 aa13.93□□□□□ -0.18
SDCBP-209ENST00000522243 GRIFINA4D1Z8 144 aa13.92□□□□□ -0.18
SDCBP-209ENST00000522243 A8MWV9 139 aa13.92□□□□□ -0.18
SDCBP-209ENST00000522243 SH2D1AO60880 128 aa13.92□□□□□ -0.18
SDCBP-209ENST00000522243 LINC01556Q5JQF7 62 aa13.92□□□□□ -0.18
SDCBP-209ENST00000522243 LELP1Q5T871 98 aa13.92□□□□□ -0.18
SDCBP-209ENST00000522243 CST9LP1Q5W188 147 aa13.92□□□□□ -0.18
SDCBP-209ENST00000522243 CDPF1Q6NVV7 123 aa13.92□□□□□ -0.18
SDCBP-209ENST00000522243 SAMD10Q9BYL1 202 aa13.92□□□□□ -0.18
SDCBP-209ENST00000522243 GAGE12JA6NER3 117 aa13.91□□□□□ -0.18
SDCBP-209ENST00000522243 UBE2G1P62253 170 aa13.91□□□□□ -0.18
SDCBP-209ENST00000522243 GAGE1Q13065 139 aa13.91□□□□□ -0.18
SDCBP-209ENST00000522243 GAGE4Q13068 117 aa13.91□□□□□ -0.18
SDCBP-209ENST00000522243 GAGE5Q13069 117 aa13.91□□□□□ -0.18
SDCBP-209ENST00000522243 GAGE13Q4V321 117 aa13.91□□□□□ -0.18
SDCBP-209ENST00000522243 GTSF1LQ9H1H1 148 aa13.91□□□□□ -0.18
SDCBP-209ENST00000522243 Q9HAA7 133 aa13.91□□□□□ -0.18
SDCBP-209ENST00000522243 IL36BQ9NZH7 164 aa13.91□□□□□ -0.18
SDCBP-209ENST00000522243 APOBP04114 4563 aaKnown RBP13.91□□□□□ -0.18
SDCBP-209ENST00000522243 IBA57-AS1B1ANH7 110 aa13.9□□□□□ -0.18
SDCBP-209ENST00000522243 KRBOX1C9JBD0 128 aa13.9□□□□□ -0.18
SDCBP-209ENST00000522243 PSCAO43653 123 aa13.9□□□□□ -0.18
SDCBP-209ENST00000522243 ARMS2P0C7Q2 107 aa13.9□□□□□ -0.18
SDCBP-209ENST00000522243 KRTAP10-1P60331 282 aa13.9□□□□□ -0.18
SDCBP-209ENST00000522243 DMRTA1Q5VZB9 504 aa13.9□□□□□ -0.18
SDCBP-209ENST00000522243 STOML3Q8TAV4 291 aa13.9□□□□□ -0.18
SDCBP-209ENST00000522243 Q9UF83 564 aa13.9□□□□□ -0.18
SDCBP-209ENST00000522243 ZFP30Q9Y2G7 519 aa13.9□□□□□ -0.18
SDCBP-209ENST00000522243 ABCA13Q86UQ4 5058 aa13.89□□□□□ -0.19
SDCBP-209ENST00000522243 DNAH5Q8TE73 4624 aa13.89□□□□□ -0.19
SDCBP-209ENST00000522243 TMSB15BA0A087X1C1 80 aa13.89□□□□□ -0.19
SDCBP-209ENST00000522243 ZFP2Q6ZN57 461 aa13.89□□□□□ -0.19
SDCBP-209ENST00000522243 KCNRGQ8N5I3 272 aa13.89□□□□□ -0.19
SDCBP-209ENST00000522243 FMC1Q96HJ9 113 aa13.89□□□□□ -0.19
SDCBP-209ENST00000522243 A0A1B0GV50 99 aa13.88□□□□□ -0.19
SDCBP-209ENST00000522243 AKR1C3P42330 323 aa13.88□□□□□ -0.19
SDCBP-209ENST00000522243 FAM162BQ5T6X4 162 aa13.88□□□□□ -0.19
SDCBP-209ENST00000522243 Q8N3U1 123 aa13.88□□□□□ -0.19
SDCBP-209ENST00000522243 C14orf178Q8N769 122 aaPredicted RBP13.88□□□□□ -0.19
SDCBP-209ENST00000522243 PAGE4O60829 102 aa13.87□□□□□ -0.19
SDCBP-209ENST00000522243 PIK3CD-AS1Q5SR53 167 aa13.87□□□□□ -0.19
SDCBP-209ENST00000522243 DNLZQ5SXM8 178 aa13.87□□□□□ -0.19
SDCBP-209ENST00000522243 UFSP1Q6NVU6 142 aa13.87□□□□□ -0.19
SDCBP-209ENST00000522243 COX8CQ7Z4L0 72 aa13.87□□□□□ -0.19
SDCBP-209ENST00000522243 SYT8Q8NBV8 401 aa13.87□□□□□ -0.19
SDCBP-209ENST00000522243 OR11H4Q8NGC9 324 aa13.87□□□□□ -0.19
SDCBP-209ENST00000522243 LINC00694P0DN24 101 aa13.86□□□□□ -0.19
SDCBP-209ENST00000522243 XGP55808 180 aa13.86□□□□□ -0.19
SDCBP-209ENST00000522243 ZNF345Q14585 488 aa13.86□□□□□ -0.19
SDCBP-209ENST00000522243 ZNF674Q2M3X9 581 aa13.86□□□□□ -0.19
SDCBP-209ENST00000522243 FAM74A4Q5TZK3 123 aa13.86□□□□□ -0.19
SDCBP-209ENST00000522243 FAM213BQ8TBF2 198 aa13.86□□□□□ -0.19
SDCBP-209ENST00000522243 SFT2D1Q8WV19 159 aa13.86□□□□□ -0.19
SDCBP-209ENST00000522243 TRBV6-1A0A0K0K1D8 114 aa13.85□□□□□ -0.19
SDCBP-209ENST00000522243 LRCOL1A6NCL2 159 aa13.85□□□□□ -0.19
SDCBP-209ENST00000522243 LTAP01374 205 aa13.85□□□□□ -0.19
SDCBP-209ENST00000522243 ZNF471Q9BX82 626 aaPredicted RBP13.85□□□□□ -0.19
SDCBP-209ENST00000522243 BOLA1Q9Y3E2 137 aa13.85□□□□□ -0.19
SDCBP-209ENST00000522243 PHLDA3Q9Y5J5 127 aa13.85□□□□□ -0.19
SDCBP-209ENST00000522243 A0A087WWL8 130 aa13.84□□□□□ -0.19
SDCBP-209ENST00000522243 M0R381 172 aa13.84□□□□□ -0.19
SDCBP-209ENST00000522243 SEC11BP0C7V7 166 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms