RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 COL6A5A8TX70 2615 aa6.95□□□□□ -1.3
SHPRH-209ENST00000521977 IGHV3-16A0A0C4DH30 117 aa6.94□□□□□ -1.3
SHPRH-209ENST00000521977 C1orf196B1AJZ1 125 aa6.94□□□□□ -1.3
SHPRH-209ENST00000521977 SNURFLB1AK76 121 aa6.94□□□□□ -1.3
SHPRH-209ENST00000521977 HLA-DQA1P01909 254 aa6.94□□□□□ -1.3
SHPRH-209ENST00000521977 ZNF493Q6ZR52 646 aa6.94□□□□□ -1.3
SHPRH-209ENST00000521977 C1orf158Q8N1D5 194 aa6.94□□□□□ -1.3
SHPRH-209ENST00000521977 TMEM256Q8N2U0 113 aa6.94□□□□□ -1.3
SHPRH-209ENST00000521977 BORCS7Q96B45 105 aa6.94□□□□□ -1.3
SHPRH-209ENST00000521977 TPPP3Q9BW30 176 aa6.94□□□□□ -1.3
SHPRH-209ENST00000521977 TP53TG3Q9ULZ0 132 aa6.94□□□□□ -1.3
SHPRH-209ENST00000521977 TRAPPC1Q9Y5R8 145 aa6.94□□□□□ -1.3
SHPRH-209ENST00000521977 TRGV11A0A075B6L2 103 aa6.93□□□□□ -1.3
SHPRH-209ENST00000521977 H3BVH4 76 aa6.93□□□□□ -1.3
SHPRH-209ENST00000521977 NXPH4O95158 308 aa6.93□□□□□ -1.3
SHPRH-209ENST00000521977 S100A8P05109 93 aa6.93□□□□□ -1.3
SHPRH-209ENST00000521977 RPL35AP18077 110 aaKnown RBP6.93□□□□□ -1.3
SHPRH-209ENST00000521977 NTF3P20783 257 aa6.93□□□□□ -1.3
SHPRH-209ENST00000521977 S100A4P26447 101 aaKnown RBP6.93□□□□□ -1.3
SHPRH-209ENST00000521977 KRTAP10-11P60412 298 aa6.93□□□□□ -1.3
SHPRH-209ENST00000521977 CACNG7P62955 275 aa6.93□□□□□ -1.3
SHPRH-209ENST00000521977 FABP9Q0Z7S8 132 aa6.93□□□□□ -1.3
SHPRH-209ENST00000521977 CSNK1G2-AS1Q8NCQ2 148 aa6.93□□□□□ -1.3
SHPRH-209ENST00000521977 C9orf85Q96MD7 179 aa6.93□□□□□ -1.3
SHPRH-209ENST00000521977 XCL2Q9UBD3 114 aa6.93□□□□□ -1.3
SHPRH-209ENST00000521977 ZMAT5Q9UDW3 170 aaKnown RBP6.93□□□□□ -1.3
SHPRH-209ENST00000521977 CAMPP49913 170 aa6.92□□□□□ -1.3
SHPRH-209ENST00000521977 RAB5BP61020 215 aa6.92□□□□□ -1.3
SHPRH-209ENST00000521977 OR10AG1Q8NH19 301 aa6.92□□□□□ -1.3
SHPRH-209ENST00000521977 FRZBQ92765 325 aa6.92□□□□□ -1.3
SHPRH-209ENST00000521977 C1QTNF4Q9BXJ3 329 aa6.92□□□□□ -1.3
SHPRH-209ENST00000521977 CSTL1Q9H114 145 aa6.92□□□□□ -1.3
SHPRH-209ENST00000521977 MSRB1Q9NZV6 116 aa6.92□□□□□ -1.3
SHPRH-209ENST00000521977 MDFICQ9P1T7 246 aa6.92□□□□□ -1.3
SHPRH-209ENST00000521977 TMA7Q9Y2S6 64 aaKnown RBP6.92□□□□□ -1.3
SHPRH-209ENST00000521977 LOC102724200A0A096LPH7 203 aaPredicted RBP6.91□□□□□ -1.3
SHPRH-209ENST00000521977 MUC21A0A0G2JKD1 596 aa6.91□□□□□ -1.3
SHPRH-209ENST00000521977 KIR2DL5BA0A0G2JN68 375 aa6.91□□□□□ -1.3
SHPRH-209ENST00000521977 KIR2DL5BA0A0G2JPC4 375 aa6.91□□□□□ -1.3
SHPRH-209ENST00000521977 MUC21A0A140T8X8 626 aa6.91□□□□□ -1.3
SHPRH-209ENST00000521977 CBY3A6NI87 242 aa6.91□□□□□ -1.3
SHPRH-209ENST00000521977 A8MZ25 164 aa6.91□□□□□ -1.3
SHPRH-209ENST00000521977 TRGC1P0CF51 173 aa6.91□□□□□ -1.3
SHPRH-209ENST00000521977 RAB4BP61018 213 aa6.91□□□□□ -1.3
SHPRH-209ENST00000521977 SLAQ13239 276 aa6.91□□□□□ -1.3
SHPRH-209ENST00000521977 TWIST1Q15672 202 aa6.91□□□□□ -1.3
SHPRH-209ENST00000521977 ZNF705AQ6ZN79 300 aaPredicted RBP6.91□□□□□ -1.3
SHPRH-209ENST00000521977 KIR2DL5AQ8N109 375 aa6.91□□□□□ -1.3
SHPRH-209ENST00000521977 C11orf72Q8NBR9 251 aa6.91□□□□□ -1.3
SHPRH-209ENST00000521977 KIR2DL5BQ8NHK3 375 aa6.91□□□□□ -1.3
SHPRH-209ENST00000521977 LINC01587Q99440 93 aa6.91□□□□□ -1.3
SHPRH-209ENST00000521977 TMEM191AQ9H0A3 160 aa6.91□□□□□ -1.3
SHPRH-209ENST00000521977 G3V4G9 280 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 HIST1H2BKO60814 126 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 APCSP02743 223 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 HIST1H2BJP06899 126 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 IGHV4-30-4P0DP06 118 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 HIST1H2BOP23527 126 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 HIST1H2BBP33778 126 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 RIPPLY3P57055 190 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 HIST1H2BDP58876 126 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 HIST1H2BCP62807 126 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 HIST2H2BEQ16778 126 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.9□□□□□ -1.3
SHPRH-209ENST00000521977 SPANXN1Q5VSR9 72 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 ZFP82Q8N141 532 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 IL17DQ8TAD2 202 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 HIST1H2BHQ93079 126 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 PTH2Q96A98 100 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 HIST1H2BNQ99877 126 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 HIST1H2BMQ99879 126 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 GOLT1BQ9Y3E0 138 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 PHLDA3Q9Y5J5 127 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 MUC4Q99102 2169 aa6.9□□□□□ -1.3
SHPRH-209ENST00000521977 SPRY2O43597 315 aa6.89□□□□□ -1.31
SHPRH-209ENST00000521977 PRM2P04554 102 aa6.89□□□□□ -1.31
SHPRH-209ENST00000521977 AZU1P20160 251 aa6.89□□□□□ -1.31
SHPRH-209ENST00000521977 ZNF415Q09FC8 603 aa6.89□□□□□ -1.31
SHPRH-209ENST00000521977 PIK3CD-AS1Q5SR53 167 aa6.89□□□□□ -1.31
SHPRH-209ENST00000521977 FAM104BQ5XKR9 115 aa6.89□□□□□ -1.31
SHPRH-209ENST00000521977 RNASE8Q8TDE3 154 aaKnown RBP6.89□□□□□ -1.31
SHPRH-209ENST00000521977 RNF185Q96GF1 192 aa6.89□□□□□ -1.31
SHPRH-209ENST00000521977 TIMM8BQ9Y5J9 83 aaPredicted RBP6.89□□□□□ -1.31
SHPRH-209ENST00000521977 M0R381 172 aa6.88□□□□□ -1.31
SHPRH-209ENST00000521977 APOC4P55056 127 aa6.88□□□□□ -1.31
SHPRH-209ENST00000521977 SSTP61278 116 aa6.88□□□□□ -1.31
SHPRH-209ENST00000521977 KIAA1644Q3SXP7 199 aa6.88□□□□□ -1.31
SHPRH-209ENST00000521977 KPRPQ5T749 579 aaPredicted RBP6.88□□□□□ -1.31
SHPRH-209ENST00000521977 AMN1Q8IY45 258 aa6.88□□□□□ -1.31
SHPRH-209ENST00000521977 TMEM263Q8WUH6 116 aaKnown RBP6.88□□□□□ -1.31
SHPRH-209ENST00000521977 SPXQ9BT56 116 aa6.88□□□□□ -1.31
SHPRH-209ENST00000521977 TMEM208Q9BTX3 173 aa6.88□□□□□ -1.31
SHPRH-209ENST00000521977 KIF25-AS1Q9Y6Z4 181 aa6.88□□□□□ -1.31
SHPRH-209ENST00000521977 U3KQK5 164 aa6.88□□□□□ -1.31
SHPRH-209ENST00000521977 PLAC8L1A1L4L8 177 aa6.87□□□□□ -1.31
SHPRH-209ENST00000521977 UBE2CO00762 179 aa6.87□□□□□ -1.31
SHPRH-209ENST00000521977 HTN1P15515 57 aa6.87□□□□□ -1.31
SHPRH-209ENST00000521977 RAB4AP20338 218 aa6.87□□□□□ -1.31
SHPRH-209ENST00000521977 EVI2AP22794 236 aa6.87□□□□□ -1.31
SHPRH-209ENST00000521977 KRTAP21-3Q3LHN1 58 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms