RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 GNRH2O43555 120 aa9.82□□□□□ -0.84
TRAPPC9-208ENST00000520857 TSPAN13O95857 204 aa9.82□□□□□ -0.84
TRAPPC9-208ENST00000520857 PIP4P1Q86T03 277 aa9.82□□□□□ -0.84
TRAPPC9-208ENST00000520857 UBTD1Q9HAC8 227 aa9.82□□□□□ -0.84
TRAPPC9-208ENST00000520857 IGKV3-20P01619 116 aa9.81□□□□□ -0.84
TRAPPC9-208ENST00000520857 TEX29Q8N6K0 151 aa9.81□□□□□ -0.84
TRAPPC9-208ENST00000520857 ZNF48Q96MX3 618 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC9-208ENST00000520857 TRAV12-1A0A0B4J245 112 aa9.8□□□□□ -0.84
TRAPPC9-208ENST00000520857 C11orf86A6NJI1 115 aa9.8□□□□□ -0.84
TRAPPC9-208ENST00000520857 IGHV4-39P01824 125 aa9.8□□□□□ -0.84
TRAPPC9-208ENST00000520857 SRSF2Q01130 221 aaKnown RBP9.8□□□□□ -0.84
TRAPPC9-208ENST00000520857 COX8CQ7Z4L0 72 aa9.8□□□□□ -0.84
TRAPPC9-208ENST00000520857 RASL10AQ92737 203 aa9.8□□□□□ -0.84
TRAPPC9-208ENST00000520857 RBAKDNA6NC62 111 aa9.8□□□□□ -0.84
TRAPPC9-208ENST00000520857 LINC01548A6NM66 108 aa9.8□□□□□ -0.84
TRAPPC9-208ENST00000520857 CCL21O00585 134 aa9.8□□□□□ -0.84
TRAPPC9-208ENST00000520857 FAM110DQ8TAY7 271 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC9-208ENST00000520857 TOMM6Q96B49 74 aa9.8□□□□□ -0.84
TRAPPC9-208ENST00000520857 M0R1W7 72 aa9.8□□□□□ -0.84
TRAPPC9-208ENST00000520857 RPL39P62891 51 aaKnown RBP9.8□□□□□ -0.84
TRAPPC9-208ENST00000520857 PRR9Q5T870 116 aa9.8□□□□□ -0.84
TRAPPC9-208ENST00000520857 CFAP126Q5VTH2 177 aa9.8□□□□□ -0.84
TRAPPC9-208ENST00000520857 XGP55808 180 aa9.79□□□□□ -0.84
TRAPPC9-208ENST00000520857 Q6ZUT4 128 aa9.79□□□□□ -0.84
TRAPPC9-208ENST00000520857 NFE4Q86UQ8 179 aa9.79□□□□□ -0.84
TRAPPC9-208ENST00000520857 Q8N9W7 124 aa9.79□□□□□ -0.84
TRAPPC9-208ENST00000520857 NEXN-AS1Q8NBZ9 246 aa9.79□□□□□ -0.84
TRAPPC9-208ENST00000520857 ZFAND6Q6FIF0 208 aa9.79□□□□□ -0.84
TRAPPC9-208ENST00000520857 FAM159AQ6UWV7 190 aa9.79□□□□□ -0.84
TRAPPC9-208ENST00000520857 TCL1BO95988 128 aa9.79□□□□□ -0.84
TRAPPC9-208ENST00000520857 TCTEX1D4Q5JR98 221 aa9.79□□□□□ -0.84
TRAPPC9-208ENST00000520857 C1orf122Q6ZSJ8 110 aa9.79□□□□□ -0.84
TRAPPC9-208ENST00000520857 TEN1Q86WV5 123 aa9.79□□□□□ -0.84
TRAPPC9-208ENST00000520857 PRO0461Q9UI25 63 aa9.79□□□□□ -0.84
TRAPPC9-208ENST00000520857 LRBAP50851 2863 aa9.79□□□□□ -0.84
TRAPPC9-208ENST00000520857 SNCGO76070 127 aa9.78□□□□□ -0.84
TRAPPC9-208ENST00000520857 HTN1P15515 57 aa9.78□□□□□ -0.84
TRAPPC9-208ENST00000520857 ZNF56Q15929 161 aa9.78□□□□□ -0.84
TRAPPC9-208ENST00000520857 ZFAND3Q9H8U3 227 aa9.78□□□□□ -0.84
TRAPPC9-208ENST00000520857 RNF183Q96D59 192 aa9.78□□□□□ -0.84
TRAPPC9-208ENST00000520857 MSRB2Q9Y3D2 182 aa9.78□□□□□ -0.84
TRAPPC9-208ENST00000520857 CD7P09564 240 aa9.78□□□□□ -0.84
TRAPPC9-208ENST00000520857 C9orf139Q6ZV77 190 aa9.78□□□□□ -0.84
TRAPPC9-208ENST00000520857 CCDC140Q96MF4 163 aa9.78□□□□□ -0.84
TRAPPC9-208ENST00000520857 SS18L2Q9UHA2 77 aa9.78□□□□□ -0.84
TRAPPC9-208ENST00000520857 SAA4P35542 130 aa9.77□□□□□ -0.84
TRAPPC9-208ENST00000520857 ANKRD29Q8N6D5 301 aa9.77□□□□□ -0.84
TRAPPC9-208ENST00000520857 JPT2Q9H910 190 aa9.77□□□□□ -0.84
TRAPPC9-208ENST00000520857 PRO1854Q9UHT4 67 aa9.77□□□□□ -0.84
TRAPPC9-208ENST00000520857 MUC6Q6W4X9 2439 aa9.77□□□□□ -0.85
TRAPPC9-208ENST00000520857 PF4V1P10720 104 aa9.77□□□□□ -0.85
TRAPPC9-208ENST00000520857 LY6EQ16553 131 aa9.77□□□□□ -0.85
TRAPPC9-208ENST00000520857 TTC32Q5I0X7 151 aa9.77□□□□□ -0.85
TRAPPC9-208ENST00000520857 PAPPA-AS1Q5QFB9 102 aa9.77□□□□□ -0.85
TRAPPC9-208ENST00000520857 ZNF575Q86XF7 245 aa9.77□□□□□ -0.85
TRAPPC9-208ENST00000520857 PPP1R17O96001 155 aa9.77□□□□□ -0.85
TRAPPC9-208ENST00000520857 ZNF688P0C7X2 276 aa9.77□□□□□ -0.85
TRAPPC9-208ENST00000520857 SMCPP49901 116 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC9-208ENST00000520857 NDUFA11Q86Y39 141 aa9.77□□□□□ -0.85
TRAPPC9-208ENST00000520857 NACAE9PAV3 2078 aa9.77□□□□□ -0.85
TRAPPC9-208ENST00000520857 CSMD1Q96PZ7 3565 aa9.77□□□□□ -0.85
TRAPPC9-208ENST00000520857 PMVKQ15126 192 aa9.76□□□□□ -0.85
TRAPPC9-208ENST00000520857 LY6G5BQ8NDX9 201 aa9.76□□□□□ -0.85
TRAPPC9-208ENST00000520857 LINC00477Q96M19 166 aa9.76□□□□□ -0.85
TRAPPC9-208ENST00000520857 ERG28Q9UKR5 140 aa9.76□□□□□ -0.85
TRAPPC9-208ENST00000520857 SLC25A20O43772 301 aa9.76□□□□□ -0.85
TRAPPC9-208ENST00000520857 C9orf47Q6ZRZ4 202 aa9.76□□□□□ -0.85
TRAPPC9-208ENST00000520857 TRBV20-1A0A075B6N2 111 aa9.76□□□□□ -0.85
TRAPPC9-208ENST00000520857 GAGE2BQ13066 116 aa9.76□□□□□ -0.85
TRAPPC9-208ENST00000520857 GAGE2EQ4V326 116 aa9.76□□□□□ -0.85
TRAPPC9-208ENST00000520857 MINOS1Q5TGZ0 78 aa9.76□□□□□ -0.85
TRAPPC9-208ENST00000520857 Q6ZS46 218 aa9.76□□□□□ -0.85
TRAPPC9-208ENST00000520857 GAGE2DQ9UEU5 116 aa9.76□□□□□ -0.85
TRAPPC9-208ENST00000520857 MINOS1-NBL1R4GNA1 71 aa9.76□□□□□ -0.85
TRAPPC9-208ENST00000520857 LINC01546A6NGU7 62 aa9.75□□□□□ -0.85
TRAPPC9-208ENST00000520857 B5MCH6 92 aa9.75□□□□□ -0.85
TRAPPC9-208ENST00000520857 CDIP1Q9H305 208 aa9.75□□□□□ -0.85
TRAPPC9-208ENST00000520857 SDHAF1A6NFY7 115 aa9.75□□□□□ -0.85
TRAPPC9-208ENST00000520857 TMEM262E9PQX1 116 aa9.75□□□□□ -0.85
TRAPPC9-208ENST00000520857 J3QQQ9 107 aa9.75□□□□□ -0.85
TRAPPC9-208ENST00000520857 TRPT1Q86TN4 253 aaKnown RBP9.75□□□□□ -0.85
TRAPPC9-208ENST00000520857 AKAP13Q12802 2813 aa9.75□□□□□ -0.85
TRAPPC9-208ENST00000520857 TRAV12-3A0A0B4J271 114 aa9.75□□□□□ -0.85
TRAPPC9-208ENST00000520857 CLPSL1A2RUU4 121 aa9.75□□□□□ -0.85
TRAPPC9-208ENST00000520857 ADARB2-AS1A8MUL3 147 aa9.75□□□□□ -0.85
TRAPPC9-208ENST00000520857 ODF3BA8MYP8 253 aa9.75□□□□□ -0.85
TRAPPC9-208ENST00000520857 NPC2P61916 151 aa9.75□□□□□ -0.85
TRAPPC9-208ENST00000520857 C10orf126Q8N4M7 172 aa9.75□□□□□ -0.85
TRAPPC9-208ENST00000520857 C20orf173Q96LM9 149 aa9.75□□□□□ -0.85
TRAPPC9-208ENST00000520857 TRBV7-1A0A0A6YYK4 115 aa9.74□□□□□ -0.85
TRAPPC9-208ENST00000520857 A4D1N5 150 aa9.74□□□□□ -0.85
TRAPPC9-208ENST00000520857 OOSP1A8MZH6 123 aa9.74□□□□□ -0.85
TRAPPC9-208ENST00000520857 ZFP36P26651 326 aaKnown RBP9.74□□□□□ -0.85
TRAPPC9-208ENST00000520857 MAP1AP78559 2803 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC9-208ENST00000520857 A0A0J9YY99 117 aa9.74□□□□□ -0.85
TRAPPC9-208ENST00000520857 OVOL1O14753 267 aa9.74□□□□□ -0.85
TRAPPC9-208ENST00000520857 Q8NA96 180 aa9.74□□□□□ -0.85
TRAPPC9-208ENST00000520857 ATP6V0E2Q8NHE4 81 aa9.74□□□□□ -0.85
TRAPPC9-208ENST00000520857 NTN5Q8WTR8 489 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC9-208ENST00000520857 OPRPNQ99935 248 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms