RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 OXLD1Q5BKU9 147 aa6.26□□□□□ -1.41
VAPB-206ENST00000520497 SPANXN1Q5VSR9 72 aa6.26□□□□□ -1.41
VAPB-206ENST00000520497 GFI1BQ5VTD9 330 aa6.26□□□□□ -1.41
VAPB-206ENST00000520497 Q6ZQT7 251 aa6.26□□□□□ -1.41
VAPB-206ENST00000520497 ZNF575Q86XF7 245 aa6.26□□□□□ -1.41
VAPB-206ENST00000520497 Q8N1Y9 231 aa6.26□□□□□ -1.41
VAPB-206ENST00000520497 GATD1Q8NB37 220 aa6.26□□□□□ -1.41
VAPB-206ENST00000520497 CNFNQ9BYD5 112 aa6.26□□□□□ -1.41
VAPB-206ENST00000520497 C11orf21Q9P2W6 132 aa6.26□□□□□ -1.41
VAPB-206ENST00000520497 PHLDA3Q9Y5J5 127 aa6.26□□□□□ -1.41
VAPB-206ENST00000520497 TRAV12-3A0A0B4J271 114 aa6.25□□□□□ -1.41
VAPB-206ENST00000520497 IGKV3D-20A0A0C4DH25 116 aa6.25□□□□□ -1.41
VAPB-206ENST00000520497 PHOX2AO14813 284 aa6.25□□□□□ -1.41
VAPB-206ENST00000520497 SNAI2O43623 268 aa6.25□□□□□ -1.41
VAPB-206ENST00000520497 ZNF324O75467 553 aaPredicted RBP6.25□□□□□ -1.41
VAPB-206ENST00000520497 HOXA5P20719 270 aa6.25□□□□□ -1.41
VAPB-206ENST00000520497 SRIP30626 198 aa6.25□□□□□ -1.41
VAPB-206ENST00000520497 ANXA2RQ3ZCQ2 193 aa6.25□□□□□ -1.41
VAPB-206ENST00000520497 COA6Q5JTJ3 125 aaKnown RBP6.25□□□□□ -1.41
VAPB-206ENST00000520497 DNLZQ5SXM8 178 aa6.25□□□□□ -1.41
VAPB-206ENST00000520497 SAMD5Q5TGI4 173 aa6.25□□□□□ -1.41
VAPB-206ENST00000520497 ZNF493Q6ZR52 646 aa6.25□□□□□ -1.41
VAPB-206ENST00000520497 SYT8Q8NBV8 401 aa6.25□□□□□ -1.41
VAPB-206ENST00000520497 TRAV12-2A0A075B6T6 113 aa6.24□□□□□ -1.41
VAPB-206ENST00000520497 IGHV1OR15-1A0A075B7D0 117 aa6.24□□□□□ -1.41
VAPB-206ENST00000520497 LOC102724200A0A096LPH7 203 aaPredicted RBP6.24□□□□□ -1.41
VAPB-206ENST00000520497 H3BVH4 76 aa6.24□□□□□ -1.41
VAPB-206ENST00000520497 PPBPP02775 128 aa6.24□□□□□ -1.41
VAPB-206ENST00000520497 RBMY1A1P0DJD3 496 aaKnown RBP6.24□□□□□ -1.41
VAPB-206ENST00000520497 RBMY1CP0DJD4 496 aa6.24□□□□□ -1.41
VAPB-206ENST00000520497 NTF3P20783 257 aa6.24□□□□□ -1.41
VAPB-206ENST00000520497 KRTAP10-11P60412 298 aa6.24□□□□□ -1.41
VAPB-206ENST00000520497 Q0VG73 95 aa6.24□□□□□ -1.41
VAPB-206ENST00000520497 RBMY1FQ15415 496 aaKnown RBP6.24□□□□□ -1.41
VAPB-206ENST00000520497 TDRG1Q3Y452 100 aa6.24□□□□□ -1.41
VAPB-206ENST00000520497 MUC21Q5SSG8 566 aa6.24□□□□□ -1.41
VAPB-206ENST00000520497 TMEM256Q8N2U0 113 aa6.24□□□□□ -1.41
VAPB-206ENST00000520497 DEFB125Q8N687 156 aa6.24□□□□□ -1.41
VAPB-206ENST00000520497 TMEM18Q96B42 140 aa6.24□□□□□ -1.41
VAPB-206ENST00000520497 SSBP4Q9BWG4 385 aaPredicted RBP6.24□□□□□ -1.41
VAPB-206ENST00000520497 C1QTNF4Q9BXJ3 329 aa6.24□□□□□ -1.41
VAPB-206ENST00000520497 TMEM191AQ9H0A3 160 aa6.24□□□□□ -1.41
VAPB-206ENST00000520497 PRKDCP78527 4128 aaKnown RBP6.23□□□□□ -1.41
VAPB-206ENST00000520497 IGHV4-4A0A075B6R2 117 aa6.23□□□□□ -1.41
VAPB-206ENST00000520497 G3V4G9 280 aa6.23□□□□□ -1.41
VAPB-206ENST00000520497 GIG44P09565 113 aaPredicted RBP6.23□□□□□ -1.41
VAPB-206ENST00000520497 SMIM17P0DL12 118 aa6.23□□□□□ -1.41
VAPB-206ENST00000520497 FXYD7P58549 80 aa6.23□□□□□ -1.41
VAPB-206ENST00000520497 SLAQ13239 276 aa6.23□□□□□ -1.41
VAPB-206ENST00000520497 MORN3Q6PF18 240 aaPredicted RBP6.23□□□□□ -1.41
VAPB-206ENST00000520497 AP1S3Q96PC3 154 aa6.23□□□□□ -1.41
VAPB-206ENST00000520497 ZMAT5Q9UDW3 170 aaKnown RBP6.23□□□□□ -1.41
VAPB-206ENST00000520497 LAMTOR2Q9Y2Q5 125 aa6.23□□□□□ -1.41
VAPB-206ENST00000520497 TIMM8BQ9Y5J9 83 aaPredicted RBP6.23□□□□□ -1.41
VAPB-206ENST00000520497 CBY3A6NI87 242 aa6.22□□□□□ -1.41
VAPB-206ENST00000520497 SSTP61278 116 aa6.22□□□□□ -1.41
VAPB-206ENST00000520497 ZNF415Q09FC8 603 aa6.22□□□□□ -1.41
VAPB-206ENST00000520497 KIAA1644Q3SXP7 199 aa6.22□□□□□ -1.41
VAPB-206ENST00000520497 FAM104BQ5XKR9 115 aa6.22□□□□□ -1.41
VAPB-206ENST00000520497 ORMDL3Q8N138 153 aa6.22□□□□□ -1.41
VAPB-206ENST00000520497 HIST3H2BBQ8N257 126 aa6.22□□□□□ -1.41
VAPB-206ENST00000520497 OR10AG1Q8NH19 301 aa6.22□□□□□ -1.41
VAPB-206ENST00000520497 ALKBH7Q9BT30 221 aaPredicted RBP6.22□□□□□ -1.41
VAPB-206ENST00000520497 TMEM208Q9BTX3 173 aa6.22□□□□□ -1.41
VAPB-206ENST00000520497 SAMD10Q9BYL1 202 aa6.22□□□□□ -1.41
VAPB-206ENST00000520497 M0R381 172 aa6.21□□□□□ -1.42
VAPB-206ENST00000520497 HSBP1O75506 76 aa6.21□□□□□ -1.42
VAPB-206ENST00000520497 PPP1R17O96001 155 aa6.21□□□□□ -1.42
VAPB-206ENST00000520497 FRMD6-AS1P0C7T7 363 aa6.21□□□□□ -1.42
VAPB-206ENST00000520497 RPL35AP18077 110 aaKnown RBP6.21□□□□□ -1.42
VAPB-206ENST00000520497 CKS2P33552 79 aa6.21□□□□□ -1.42
VAPB-206ENST00000520497 CSNK1G2-AS1Q8NCQ2 148 aa6.21□□□□□ -1.42
VAPB-206ENST00000520497 C18orf32Q8TCD1 76 aa6.21□□□□□ -1.42
VAPB-206ENST00000520497 MRAP2Q96G30 205 aa6.21□□□□□ -1.42
VAPB-206ENST00000520497 LINC00467Q9BRT7 94 aa6.21□□□□□ -1.42
VAPB-206ENST00000520497 DPH3P1Q9H4G8 78 aa6.21□□□□□ -1.42
VAPB-206ENST00000520497 GOLT1BQ9Y3E0 138 aa6.21□□□□□ -1.42
VAPB-206ENST00000520497 TGP01266 2768 aa6.21□□□□□ -1.42
VAPB-206ENST00000520497 MUC21A0A0G2JKD1 596 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 KIR2DL5BA0A0G2JN68 375 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 KIR2DL5BA0A0G2JPC4 375 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 MUC21A0A140T8X8 626 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 A8MZ25 164 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 GNRH2O43555 120 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 SERF1AO75920 110 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 NXPH4O95158 308 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 PRB2P02812 416 aaPredicted RBP6.2□□□□□ -1.42
VAPB-206ENST00000520497 IGHV4-30-4P0DP06 118 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 ESDP10768 282 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 FABP4P15090 132 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 RAB4AP20338 218 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 PMCHP20382 165 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 PDZD11Q5EBL8 140 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 KPRPQ5T749 579 aaPredicted RBP6.2□□□□□ -1.42
VAPB-206ENST00000520497 RNASEKQ6P5S7 137 aaKnown RBP6.2□□□□□ -1.42
VAPB-206ENST00000520497 AMN1Q8IY45 258 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 KIR2DL5AQ8N109 375 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 C1orf158Q8N1D5 194 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 KIR2DL5BQ8NHK3 375 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 CHCHD1Q96BP2 118 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms