RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 DEFB132Q7Z7B7 95 aa0.37□□□□□ -2.35
SKP1-207ENST00000520417 FAM103A1Q9BTL3 118 aaKnown RBP0.37□□□□□ -2.35
SKP1-207ENST00000520417 BET1LQ9NYM9 111 aa0.37□□□□□ -2.35
SKP1-207ENST00000520417 LSM2Q9Y333 95 aaKnown RBP0.37□□□□□ -2.35
SKP1-207ENST00000520417 ZCCHC11Q5TAX3 1644 aaKnown RBP0.37□□□□□ -2.35
SKP1-207ENST00000520417 ARHGEF10O15013 1369 aa0.36□□□□□ -2.35
SKP1-207ENST00000520417 TRBV20-1A0A075B6N2 111 aa0.36□□□□□ -2.35
SKP1-207ENST00000520417 TRAV2A0A0B4J234 112 aa0.36□□□□□ -2.35
SKP1-207ENST00000520417 CXorf51AA0A1B0GTR3 108 aa0.36□□□□□ -2.35
SKP1-207ENST00000520417 TCRBV3S1A0A5B6 114 aa0.36□□□□□ -2.35
SKP1-207ENST00000520417 J3QLW9 94 aa0.36□□□□□ -2.35
SKP1-207ENST00000520417 LINC00694P0DN24 101 aa0.36□□□□□ -2.35
SKP1-207ENST00000520417 RPL37P61927 97 aaKnown RBP0.36□□□□□ -2.35
SKP1-207ENST00000520417 MORN2Q502X0 79 aa0.36□□□□□ -2.35
SKP1-207ENST00000520417 TSTD1Q8NFU3 115 aa0.36□□□□□ -2.35
SKP1-207ENST00000520417 TSKUQ8WUA8 353 aa0.36□□□□□ -2.35
SKP1-207ENST00000520417 ANP32BQ92688 251 aaKnown RBP0.36□□□□□ -2.35
SKP1-207ENST00000520417 IFI27L1Q96BM0 104 aa0.36□□□□□ -2.35
SKP1-207ENST00000520417 SAR1AQ9NR31 198 aa0.36□□□□□ -2.35
SKP1-207ENST00000520417 ERG28Q9UKR5 140 aa0.36□□□□□ -2.35
SKP1-207ENST00000520417 ABCA4P78363 2273 aa0.36□□□□□ -2.35
SKP1-207ENST00000520417 KIAA1549LQ6ZVL6 1849 aa0.36□□□□□ -2.35
SKP1-207ENST00000520417 XIRP1Q702N8 1843 aaKnown RBP0.36□□□□□ -2.35
SKP1-207ENST00000520417 NAV3Q8IVL0 2385 aa0.35□□□□□ -2.35
SKP1-207ENST00000520417 ABCA1O95477 2261 aa0.35□□□□□ -2.35
SKP1-207ENST00000520417 CPDO75976 1380 aa0.35□□□□□ -2.35
SKP1-207ENST00000520417 CACNA1EQ15878 2313 aa0.35□□□□□ -2.35
SKP1-207ENST00000520417 KMT2DO14686 5537 aa0.35□□□□□ -2.35
SKP1-207ENST00000520417 LOC105371267A0A1B0GV96 52 aa0.35□□□□□ -2.35
SKP1-207ENST00000520417 M0R129 80 aa0.35□□□□□ -2.35
SKP1-207ENST00000520417 M0R2P5 195 aa0.35□□□□□ -2.35
SKP1-207ENST00000520417 MPC1LP0DKB6 136 aa0.35□□□□□ -2.35
SKP1-207ENST00000520417 ELOF1P60002 83 aaKnown RBP0.35□□□□□ -2.35
SKP1-207ENST00000520417 RPL7L1Q6DKI1 246 aaKnown RBP0.35□□□□□ -2.35
SKP1-207ENST00000520417 CYP2G1PQ6ZSU1 146 aa0.35□□□□□ -2.35
SKP1-207ENST00000520417 CTAGE3PQ8IX95 158 aa0.35□□□□□ -2.35
SKP1-207ENST00000520417 DSCR8Q96T75 97 aa0.35□□□□□ -2.35
SKP1-207ENST00000520417 PSMG3Q9BT73 122 aaPredicted RBP0.35□□□□□ -2.35
SKP1-207ENST00000520417 PLAC8Q9NZF1 115 aa0.35□□□□□ -2.35
SKP1-207ENST00000520417 COPZ2Q9P299 210 aa0.35□□□□□ -2.35
SKP1-207ENST00000520417 BDP1A6H8Y1 2624 aa0.35□□□□□ -2.35
SKP1-207ENST00000520417 ZCCHC6Q5VYS8 1495 aaKnown RBP0.35□□□□□ -2.35
SKP1-207ENST00000520417 CTTNBP2Q8WZ74 1663 aa0.34□□□□□ -2.35
SKP1-207ENST00000520417 ESPL1Q14674 2120 aa0.34□□□□□ -2.35
SKP1-207ENST00000520417 FAM236AA0A1B0GUQ0 79 aa0.34□□□□□ -2.36
SKP1-207ENST00000520417 FAM236BA0A1B0GV22 79 aa0.34□□□□□ -2.36
SKP1-207ENST00000520417 RBAKDNA6NC62 111 aa0.34□□□□□ -2.36
SKP1-207ENST00000520417 F2Z2F3 143 aa0.34□□□□□ -2.36
SKP1-207ENST00000520417 CCDC179H3BU77 68 aa0.34□□□□□ -2.36
SKP1-207ENST00000520417 PRH1P02810 166 aa0.34□□□□□ -2.36
SKP1-207ENST00000520417 PYYP10082 97 aa0.34□□□□□ -2.36
SKP1-207ENST00000520417 COX4I1P13073 169 aa0.34□□□□□ -2.36
SKP1-207ENST00000520417 SMCO1Q147U7 214 aa0.34□□□□□ -2.36
SKP1-207ENST00000520417 ALX1Q15699 326 aa0.34□□□□□ -2.36
SKP1-207ENST00000520417 ARHGAP31Q2M1Z3 1444 aa0.34□□□□□ -2.36
SKP1-207ENST00000520417 MIC13Q5XKP0 118 aa0.34□□□□□ -2.36
SKP1-207ENST00000520417 NDUFA11Q86Y39 141 aa0.34□□□□□ -2.36
SKP1-207ENST00000520417 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.34□□□□□ -2.36
SKP1-207ENST00000520417 CCDC171Q6TFL3 1326 aa0.34□□□□□ -2.36
SKP1-207ENST00000520417 NEBP20929 6669 aa0.34□□□□□ -2.36
SKP1-207ENST00000520417 USP54Q70EL1 1684 aa0.33□□□□□ -2.36
SKP1-207ENST00000520417 DISP2A7MBM2 1401 aa0.33□□□□□ -2.36
SKP1-207ENST00000520417 PTPRGP23470 1445 aa0.33□□□□□ -2.36
SKP1-207ENST00000520417 KIDINS220Q9ULH0 1771 aa0.33□□□□□ -2.36
SKP1-207ENST00000520417 TRAV12-2A0A075B6T6 113 aa0.33□□□□□ -2.36
SKP1-207ENST00000520417 SNCGO76070 127 aa0.33□□□□□ -2.36
SKP1-207ENST00000520417 PIRTP0C851 137 aa0.33□□□□□ -2.36
SKP1-207ENST00000520417 SPCS2Q15005 226 aa0.33□□□□□ -2.36
SKP1-207ENST00000520417 SMIM21Q3B7S5 101 aa0.33□□□□□ -2.36
SKP1-207ENST00000520417 FAM74A4Q5TZK3 123 aa0.33□□□□□ -2.36
SKP1-207ENST00000520417 LINC01545Q5VT33 79 aa0.33□□□□□ -2.36
SKP1-207ENST00000520417 OR2T2Q6IF00 324 aa0.33□□□□□ -2.36
SKP1-207ENST00000520417 SPINK6Q6UWN8 80 aa0.33□□□□□ -2.36
SKP1-207ENST00000520417 C4orf33Q8N1A6 199 aa0.33□□□□□ -2.36
SKP1-207ENST00000520417 SMR3AQ99954 134 aa0.33□□□□□ -2.36
SKP1-207ENST00000520417 TPT1P8Q9HAU6 139 aa0.33□□□□□ -2.36
SKP1-207ENST00000520417 NDUFA12Q9UI09 145 aa0.33□□□□□ -2.36
SKP1-207ENST00000520417 FRAS1Q86XX4 4008 aa0.33□□□□□ -2.36
SKP1-207ENST00000520417 AFDNP55196 1824 aaKnown RBP0.33□□□□□ -2.36
SKP1-207ENST00000520417 MYO7AQ13402 2215 aa0.33□□□□□ -2.36
SKP1-207ENST00000520417 CDK5RAP2Q96SN8 1893 aa0.33□□□□□ -2.36
SKP1-207ENST00000520417 NAV2Q8IVL1 2488 aa0.32□□□□□ -2.36
SKP1-207ENST00000520417 SYNJ1O43426 1573 aa0.32□□□□□ -2.36
SKP1-207ENST00000520417 OTOGQ6ZRI0 2925 aa0.32□□□□□ -2.36
SKP1-207ENST00000520417 TNCP24821 2201 aa0.32□□□□□ -2.36
SKP1-207ENST00000520417 TRAV12-3A0A0B4J271 114 aa0.32□□□□□ -2.36
SKP1-207ENST00000520417 IL5P05113 134 aa0.32□□□□□ -2.36
SKP1-207ENST00000520417 COPZ1P61923 177 aa0.32□□□□□ -2.36
SKP1-207ENST00000520417 RRAS2P62070 204 aaPredicted RBP0.32□□□□□ -2.36
SKP1-207ENST00000520417 EMX2Q04743 252 aa0.32□□□□□ -2.36
SKP1-207ENST00000520417 SSBP1Q04837 148 aaKnown RBP0.32□□□□□ -2.36
SKP1-207ENST00000520417 C20orf197Q8N268 126 aa0.32□□□□□ -2.36
SKP1-207ENST00000520417 KCNRGQ8N5I3 272 aa0.32□□□□□ -2.36
SKP1-207ENST00000520417 PRR15LQ9BU68 103 aa0.32□□□□□ -2.36
SKP1-207ENST00000520417 RPRMQ9NS64 109 aa0.32□□□□□ -2.36
SKP1-207ENST00000520417 ARAP1Q96P48 1450 aa0.32□□□□□ -2.36
SKP1-207ENST00000520417 MED13LQ71F56 2210 aa0.32□□□□□ -2.36
SKP1-207ENST00000520417 LRP5O75197 1615 aa0.31□□□□□ -2.36
SKP1-207ENST00000520417 OVOS2A0A0J9YW53 1432 aa0.31□□□□□ -2.36
SKP1-207ENST00000520417 OVOS2Q6IE36 1432 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms