RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 PTH2Q96A98 100 aa12.71□□□□□ -0.37
SDC2-205ENST00000520233 GFRA4Q9GZZ7 299 aa12.71□□□□□ -0.37
SDC2-205ENST00000520233 CELA1Q9UNI1 258 aa12.71□□□□□ -0.37
SDC2-205ENST00000520233 FAM231BA6NCW3 169 aa12.7□□□□□ -0.38
SDC2-205ENST00000520233 CXorf65A6NEN9 183 aa12.7□□□□□ -0.38
SDC2-205ENST00000520233 FOXA3P55318 350 aaPredicted RBP12.7□□□□□ -0.38
SDC2-205ENST00000520233 F2Z2F3 143 aa12.69□□□□□ -0.38
SDC2-205ENST00000520233 SNAPINO95295 136 aa12.69□□□□□ -0.38
SDC2-205ENST00000520233 RHEBQ15382 184 aa12.69□□□□□ -0.38
SDC2-205ENST00000520233 LINC00612Q8N6U2 182 aa12.69□□□□□ -0.38
SDC2-205ENST00000520233 GTSF1Q8WW33 167 aa12.69□□□□□ -0.38
SDC2-205ENST00000520233 RASL10AQ92737 203 aa12.69□□□□□ -0.38
SDC2-205ENST00000520233 CTDSP1Q9GZU7 261 aa12.69□□□□□ -0.38
SDC2-205ENST00000520233 EDA2RQ9HAV5 297 aa12.69□□□□□ -0.38
SDC2-205ENST00000520233 MRPL16Q9NX20 251 aaKnown RBP12.69□□□□□ -0.38
SDC2-205ENST00000520233 PHLDA3Q9Y5J5 127 aa12.69□□□□□ -0.38
SDC2-205ENST00000520233 TRGV1A0A0A0MS02 117 aa12.68□□□□□ -0.38
SDC2-205ENST00000520233 PIK3CD-AS1Q5SR53 167 aa12.68□□□□□ -0.38
SDC2-205ENST00000520233 LYZL1Q6UWQ5 148 aa12.68□□□□□ -0.38
SDC2-205ENST00000520233 Q6ZTI0 123 aa12.68□□□□□ -0.38
SDC2-205ENST00000520233 C11orf45Q8TAV5 145 aa12.68□□□□□ -0.38
SDC2-205ENST00000520233 NDUFAF3Q9BU61 184 aa12.68□□□□□ -0.38
SDC2-205ENST00000520233 TPPP3Q9BW30 176 aa12.68□□□□□ -0.38
SDC2-205ENST00000520233 SMIM27A0A1W2PRY6 76 aa12.67□□□□□ -0.38
SDC2-205ENST00000520233 GAGE12BA1L429 117 aa12.67□□□□□ -0.38
SDC2-205ENST00000520233 C7orf77A4D0Y5 90 aa12.67□□□□□ -0.38
SDC2-205ENST00000520233 GAGE7O76087 117 aa12.67□□□□□ -0.38
SDC2-205ENST00000520233 GAGE12FP0CL80 117 aa12.67□□□□□ -0.38
SDC2-205ENST00000520233 GAGE12GP0CL81 117 aa12.67□□□□□ -0.38
SDC2-205ENST00000520233 GAGE12IP0CL82 117 aa12.67□□□□□ -0.38
SDC2-205ENST00000520233 CTRLP40313 264 aa12.67□□□□□ -0.38
SDC2-205ENST00000520233 ZNF876PQ49A33 203 aa12.67□□□□□ -0.38
SDC2-205ENST00000520233 ZFP82Q8N141 532 aa12.67□□□□□ -0.38
SDC2-205ENST00000520233 SYT8Q8NBV8 401 aa12.67□□□□□ -0.38
SDC2-205ENST00000520233 NBEAL2Q6ZNJ1 2754 aa12.66□□□□□ -0.38
SDC2-205ENST00000520233 A0A087WWC5 75 aa12.66□□□□□ -0.38
SDC2-205ENST00000520233 HIGD1CA8MV81 97 aa12.66□□□□□ -0.38
SDC2-205ENST00000520233 DEFB130BP0DP73 79 aa12.66□□□□□ -0.38
SDC2-205ENST00000520233 DEFB130AP0DP74 79 aa12.66□□□□□ -0.38
SDC2-205ENST00000520233 DAD1P61803 113 aa12.66□□□□□ -0.38
SDC2-205ENST00000520233 CACNG7P62955 275 aa12.66□□□□□ -0.38
SDC2-205ENST00000520233 WDR73Q6P4I2 378 aa12.66□□□□□ -0.38
SDC2-205ENST00000520233 OR10AG1Q8NH19 301 aa12.66□□□□□ -0.38
SDC2-205ENST00000520233 C18orf15Q96N68 181 aa12.66□□□□□ -0.38
SDC2-205ENST00000520233 NAT8BQ9UHF3 227 aa12.66□□□□□ -0.38
SDC2-205ENST00000520233 IGHV4-4A0A075B6R2 117 aa12.65□□□□□ -0.38
SDC2-205ENST00000520233 M0R381 172 aa12.65□□□□□ -0.38
SDC2-205ENST00000520233 NXPH4O95158 308 aa12.65□□□□□ -0.38
SDC2-205ENST00000520233 C12orf74Q32Q52 190 aa12.65□□□□□ -0.38
SDC2-205ENST00000520233 SPANXN1Q5VSR9 72 aa12.65□□□□□ -0.38
SDC2-205ENST00000520233 DMRTA1Q5VZB9 504 aa12.65□□□□□ -0.38
SDC2-205ENST00000520233 PGLYRP4Q96LB8 373 aa12.65□□□□□ -0.38
SDC2-205ENST00000520233 CNFNQ9BYD5 112 aa12.65□□□□□ -0.38
SDC2-205ENST00000520233 RPS10P5Q9NQ39 176 aa12.65□□□□□ -0.38
SDC2-205ENST00000520233 TMEM242Q9NWH2 141 aa12.65□□□□□ -0.38
SDC2-205ENST00000520233 PRKDCP78527 4128 aaKnown RBP12.64□□□□□ -0.39
SDC2-205ENST00000520233 MUC21A0A0G2JKD1 596 aa12.64□□□□□ -0.39
SDC2-205ENST00000520233 MUC21A0A140T8X8 626 aa12.64□□□□□ -0.39
SDC2-205ENST00000520233 NUP35Q8NFH5 326 aa12.64□□□□□ -0.39
SDC2-205ENST00000520233 DNAH9Q9NYC9 4486 aa12.63□□□□□ -0.39
SDC2-205ENST00000520233 TRGV2A0A075B6R0 118 aa12.63□□□□□ -0.39
SDC2-205ENST00000520233 NANOS2P60321 138 aaKnown RBP12.63□□□□□ -0.39
SDC2-205ENST00000520233 BORCS7Q96B45 105 aa12.63□□□□□ -0.39
SDC2-205ENST00000520233 IMMP2LQ96T52 175 aa12.63□□□□□ -0.39
SDC2-205ENST00000520233 NTF3P20783 257 aa12.62□□□□□ -0.39
SDC2-205ENST00000520233 SSTP61278 116 aa12.62□□□□□ -0.39
SDC2-205ENST00000520233 HUWE1Q7Z6Z7 4374 aaKnown RBP12.61□□□□□ -0.39
SDC2-205ENST00000520233 TRAV4A0A0B4J268 109 aa12.61□□□□□ -0.39
SDC2-205ENST00000520233 A0A1B0GUT8 65 aa12.61□□□□□ -0.39
SDC2-205ENST00000520233 A8MWV9 139 aa12.61□□□□□ -0.39
SDC2-205ENST00000520233 RS1O15537 224 aa12.61□□□□□ -0.39
SDC2-205ENST00000520233 MUC4Q99102 2169 aa12.61□□□□□ -0.39
SDC2-205ENST00000520233 TENM3Q9P273 2699 aa12.6□□□□□ -0.39
SDC2-205ENST00000520233 ATP5G1P05496 136 aa12.6□□□□□ -0.39
SDC2-205ENST00000520233 FAM3BP58499 235 aaPredicted RBP12.6□□□□□ -0.39
SDC2-205ENST00000520233 CFAP126Q5VTH2 177 aa12.6□□□□□ -0.39
SDC2-205ENST00000520233 Q6ZTC4 211 aa12.6□□□□□ -0.39
SDC2-205ENST00000520233 POM121L12Q8N7R1 296 aa12.6□□□□□ -0.39
SDC2-205ENST00000520233 OR4C5Q8NGB2 326 aa12.6□□□□□ -0.39
SDC2-205ENST00000520233 JPT2Q9H910 190 aa12.6□□□□□ -0.39
SDC2-205ENST00000520233 MSRB1Q9NZV6 116 aa12.6□□□□□ -0.39
SDC2-205ENST00000520233 CIDEAO60543 219 aa12.59□□□□□ -0.39
SDC2-205ENST00000520233 RIGQ13278 110 aa12.59□□□□□ -0.39
SDC2-205ENST00000520233 TWIST1Q15672 202 aa12.59□□□□□ -0.39
SDC2-205ENST00000520233 KCNIP4Q6PIL6 250 aa12.59□□□□□ -0.39
SDC2-205ENST00000520233 ATRAIDQ6UW56 229 aa12.59□□□□□ -0.39
SDC2-205ENST00000520233 TRGC1P0CF51 173 aa12.58□□□□□ -0.4
SDC2-205ENST00000520233 ZNF479Q96JC4 524 aa12.58□□□□□ -0.4
SDC2-205ENST00000520233 AP1S3Q96PC3 154 aa12.58□□□□□ -0.4
SDC2-205ENST00000520233 TRAV10A0A0B4J240 114 aa12.57□□□□□ -0.4
SDC2-205ENST00000520233 IGHV3-53P01767 116 aa12.57□□□□□ -0.4
SDC2-205ENST00000520233 CRYGDP07320 174 aa12.57□□□□□ -0.4
SDC2-205ENST00000520233 S100PP25815 95 aa12.57□□□□□ -0.4
SDC2-205ENST00000520233 ZFP2Q6ZN57 461 aa12.57□□□□□ -0.4
SDC2-205ENST00000520233 SAMD10Q9BYL1 202 aa12.57□□□□□ -0.4
SDC2-205ENST00000520233 TRAV9-1A0A075B6T8 112 aa12.56□□□□□ -0.4
SDC2-205ENST00000520233 A0A1B0GW15 77 aa12.56□□□□□ -0.4
SDC2-205ENST00000520233 RHODO00212 210 aa12.56□□□□□ -0.4
SDC2-205ENST00000520233 ATP6V1G1O75348 118 aa12.56□□□□□ -0.4
SDC2-205ENST00000520233 S100A1P23297 94 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms