RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 PAEPP09466 180 aa-0.08□□□□□ -2.42
NPM1-206ENST00000519955 AKR1D1P51857 326 aa-0.08□□□□□ -2.42
NPM1-206ENST00000519955 TMEM91Q6ZNR0 172 aa-0.08□□□□□ -2.42
NPM1-206ENST00000519955 SLC25A26Q70HW3 274 aa-0.08□□□□□ -2.42
NPM1-206ENST00000519955 MACF1Q9UPN3 7388 aaKnown RBP-0.08□□□□□ -2.42
NPM1-206ENST00000519955 IGSF10Q6WRI0 2623 aa-0.08□□□□□ -2.42
NPM1-206ENST00000519955 HRNRQ86YZ3 2850 aaPredicted RBP-0.08□□□□□ -2.42
NPM1-206ENST00000519955 CACNA1HO95180 2353 aa-0.09□□□□□ -2.42
NPM1-206ENST00000519955 OTOGQ6ZRI0 2925 aa-0.09□□□□□ -2.42
NPM1-206ENST00000519955 HSPB11Q9Y547 144 aa-0.09□□□□□ -2.42
NPM1-206ENST00000519955 JMJD1CQ15652 2540 aa-0.09□□□□□ -2.42
NPM1-206ENST00000519955 NCOR2Q9Y618 2525 aa-0.1□□□□□ -2.42
NPM1-206ENST00000519955 F2Z2F3 143 aa-0.1□□□□□ -2.43
NPM1-206ENST00000519955 SELENOSQ9BQE4 189 aa-0.1□□□□□ -2.43
NPM1-206ENST00000519955 TRAV36DV7A0A075B6V5 113 aa-0.11□□□□□ -2.43
NPM1-206ENST00000519955 SMIM24O75264 130 aa-0.11□□□□□ -2.43
NPM1-206ENST00000519955 EMX2Q04743 252 aa-0.11□□□□□ -2.43
NPM1-206ENST00000519955 GINS2Q9Y248 185 aa-0.11□□□□□ -2.43
NPM1-206ENST00000519955 CCDC171Q6TFL3 1326 aa-0.12□□□□□ -2.43
NPM1-206ENST00000519955 A0A1B0GX51 115 aa-0.12□□□□□ -2.43
NPM1-206ENST00000519955 ZNF670-ZNF695F2Z2N8 137 aa-0.12□□□□□ -2.43
NPM1-206ENST00000519955 MT-ND4LP03901 98 aa-0.12□□□□□ -2.43
NPM1-206ENST00000519955 ELOF1P60002 83 aaKnown RBP-0.12□□□□□ -2.43
NPM1-206ENST00000519955 DNAJC15Q9Y5T4 150 aa-0.12□□□□□ -2.43
NPM1-206ENST00000519955 HELZP42694 1942 aaKnown RBP-0.13□□□□□ -2.43
NPM1-206ENST00000519955 A0A1B0GW64 132 aa-0.13□□□□□ -2.43
NPM1-206ENST00000519955 HLA-DRB4P13762 266 aa-0.13□□□□□ -2.43
NPM1-206ENST00000519955 TMEM244Q5VVB8 128 aa-0.13□□□□□ -2.43
NPM1-206ENST00000519955 NDUFA11Q86Y39 141 aa-0.13□□□□□ -2.43
NPM1-206ENST00000519955 MAGOHBQ96A72 148 aaKnown RBP-0.13□□□□□ -2.43
NPM1-206ENST00000519955 HLA-DRB4X5D2U9 266 aa-0.13□□□□□ -2.43
NPM1-206ENST00000519955 ABCA1O95477 2261 aa-0.13□□□□□ -2.43
NPM1-206ENST00000519955 COL7A1Q02388 2944 aa-0.14□□□□□ -2.43
NPM1-206ENST00000519955 KDM5CP41229 1560 aa-0.14□□□□□ -2.43
NPM1-206ENST00000519955 UHRF1BP1LA0JNW5 1464 aa-0.14□□□□□ -2.43
NPM1-206ENST00000519955 SCTP09683 121 aa-0.14□□□□□ -2.43
NPM1-206ENST00000519955 OR8B8Q15620 311 aa-0.14□□□□□ -2.43
NPM1-206ENST00000519955 BPESC1Q9GZL8 116 aa-0.14□□□□□ -2.43
NPM1-206ENST00000519955 BANF2Q9H503 90 aa-0.14□□□□□ -2.43
NPM1-206ENST00000519955 SOGA1O94964 1423 aa-0.14□□□□□ -2.43
NPM1-206ENST00000519955 RBP4P02753 201 aa-0.15□□□□□ -2.43
NPM1-206ENST00000519955 TFF1P04155 84 aa-0.15□□□□□ -2.43
NPM1-206ENST00000519955 SNX29P2Q8IUI4 249 aa-0.15□□□□□ -2.43
NPM1-206ENST00000519955 ATP6V0E2Q8NHE4 81 aa-0.15□□□□□ -2.43
NPM1-206ENST00000519955 DYNLRB2Q8TF09 96 aa-0.15□□□□□ -2.43
NPM1-206ENST00000519955 SPANXCQ9NY87 97 aa-0.15□□□□□ -2.43
NPM1-206ENST00000519955 CDK13Q14004 1512 aaKnown RBP-0.15□□□□□ -2.43
NPM1-206ENST00000519955 ANK2Q01484 3957 aa-0.15□□□□□ -2.43
NPM1-206ENST00000519955 TCRBV3S1A0A5B6 114 aa-0.16□□□□□ -2.44
NPM1-206ENST00000519955 RBAKDNA6NC62 111 aa-0.16□□□□□ -2.44
NPM1-206ENST00000519955 DEGS1O15121 323 aa-0.16□□□□□ -2.44
NPM1-206ENST00000519955 YPEL1O60688 119 aa-0.16□□□□□ -2.44
NPM1-206ENST00000519955 TNFSF15O95150 251 aa-0.16□□□□□ -2.44
NPM1-206ENST00000519955 OR2T2Q6IF00 324 aa-0.16□□□□□ -2.44
NPM1-206ENST00000519955 TCTE3Q8IZS6 198 aa-0.16□□□□□ -2.44
NPM1-206ENST00000519955 NOP16Q9Y3C1 178 aaKnown RBP-0.16□□□□□ -2.44
NPM1-206ENST00000519955 XIRP1Q702N8 1843 aaKnown RBP-0.16□□□□□ -2.44
NPM1-206ENST00000519955 LAMC3Q9Y6N6 1575 aa-0.16□□□□□ -2.44
NPM1-206ENST00000519955 POLQO75417 2590 aa-0.17□□□□□ -2.44
NPM1-206ENST00000519955 UNC13BO14795 1591 aa-0.17□□□□□ -2.44
NPM1-206ENST00000519955 COX6A2Q02221 97 aa-0.17□□□□□ -2.44
NPM1-206ENST00000519955 TNS1Q9HBL0 1735 aaKnown RBP-0.18□□□□□ -2.44
NPM1-206ENST00000519955 BORCS7-ASMTA0A0B4J1R7 106 aa-0.18□□□□□ -2.44
NPM1-206ENST00000519955 GNG14A0A1W2PPG7 69 aa-0.18□□□□□ -2.44
NPM1-206ENST00000519955 NBEAP1P0C6P0 100 aa-0.18□□□□□ -2.44
NPM1-206ENST00000519955 SLC25A6P12236 298 aa-0.18□□□□□ -2.44
NPM1-206ENST00000519955 CMPK1P30085 196 aa-0.18□□□□□ -2.44
NPM1-206ENST00000519955 SPANXA1Q9NS26 97 aa-0.18□□□□□ -2.44
NPM1-206ENST00000519955 HIGD1AQ9Y241 93 aa-0.18□□□□□ -2.44
NPM1-206ENST00000519955 ATP11AUNQ6ZP68 121 aa-0.19□□□□□ -2.44
NPM1-206ENST00000519955 CYP2G1PQ6ZSU1 146 aa-0.19□□□□□ -2.44
NPM1-206ENST00000519955 ERG28Q9UKR5 140 aa-0.19□□□□□ -2.44
NPM1-206ENST00000519955 ARAP1Q96P48 1450 aa-0.19□□□□□ -2.44
NPM1-206ENST00000519955 CACNA1CQ13936 2221 aa-0.19□□□□□ -2.44
NPM1-206ENST00000519955 ABCA4P78363 2273 aa-0.2□□□□□ -2.44
NPM1-206ENST00000519955 PLXNA2O75051 1894 aa-0.2□□□□□ -2.44
NPM1-206ENST00000519955 GVQW2A0A096LPI5 108 aaPredicted RBP-0.2□□□□□ -2.44
NPM1-206ENST00000519955 H0YJX3 145 aa-0.2□□□□□ -2.44
NPM1-206ENST00000519955 FAM213BQ8TBF2 198 aa-0.2□□□□□ -2.44
NPM1-206ENST00000519955 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.21□□□□□ -2.44
NPM1-206ENST00000519955 SMIM11BQ8TCY0 68 aa-0.21□□□□□ -2.44
NPM1-206ENST00000519955 IFI27L1Q96BM0 104 aa-0.21□□□□□ -2.44
NPM1-206ENST00000519955 MYO7AQ13402 2215 aa-0.21□□□□□ -2.44
NPM1-206ENST00000519955 ZNF142P52746 1687 aaPredicted RBP-0.21□□□□□ -2.44
NPM1-206ENST00000519955 CCDC179H3BU77 68 aa-0.22□□□□□ -2.44
NPM1-206ENST00000519955 COX4I1P13073 169 aa-0.22□□□□□ -2.44
NPM1-206ENST00000519955 CCDC153Q494R4 210 aa-0.22□□□□□ -2.44
NPM1-206ENST00000519955 CLLU1Q5K131 121 aa-0.22□□□□□ -2.44
NPM1-206ENST00000519955 CASZ1Q86V15 1759 aa-0.22□□□□□ -2.45
NPM1-206ENST00000519955 ASXL3Q9C0F0 2248 aa-0.23□□□□□ -2.45
NPM1-206ENST00000519955 J3QLW9 94 aa-0.23□□□□□ -2.45
NPM1-206ENST00000519955 CCL3L1P16619 93 aa-0.23□□□□□ -2.45
NPM1-206ENST00000519955 SSBP1Q04837 148 aaKnown RBP-0.23□□□□□ -2.45
NPM1-206ENST00000519955 U3KQA8 63 aa-0.23□□□□□ -2.45
NPM1-206ENST00000519955 VIRMAQ69YN4 1812 aaKnown RBP-0.23□□□□□ -2.45
NPM1-206ENST00000519955 CELSR2Q9HCU4 2923 aa-0.23□□□□□ -2.45
NPM1-206ENST00000519955 A0A087WTM6 91 aa-0.24□□□□□ -2.45
NPM1-206ENST00000519955 DBIP07108 87 aaKnown RBP-0.24□□□□□ -2.45
NPM1-206ENST00000519955 PTPRMP28827 1452 aa-0.24□□□□□ -2.45
NPM1-206ENST00000519955 HIVEP3Q5T1R4 2406 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms