RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 RIGQ13278 110 aa17.35■□□□□ 0.37
SLIT3-204ENST00000518140 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.35■□□□□ 0.37
SLIT3-204ENST00000518140 ZNF256Q9Y2P7 627 aaPredicted RBP17.35■□□□□ 0.37
SLIT3-204ENST00000518140 TENM1Q9UKZ4 2725 aa17.35■□□□□ 0.37
SLIT3-204ENST00000518140 TRBV7-9A0A0J9YWB2 115 aa17.35■□□□□ 0.37
SLIT3-204ENST00000518140 KLLNB2CW77 178 aa17.35■□□□□ 0.37
SLIT3-204ENST00000518140 LINC00614P0C842 121 aa17.35■□□□□ 0.37
SLIT3-204ENST00000518140 TSPOP30536 169 aa17.35■□□□□ 0.37
SLIT3-204ENST00000518140 TMEM70Q9BUB7 260 aa17.35■□□□□ 0.37
SLIT3-204ENST00000518140 TEP1Q99973 2627 aaKnown RBP17.34■□□□□ 0.37
SLIT3-204ENST00000518140 TRAV2A0A0B4J234 112 aa17.33■□□□□ 0.37
SLIT3-204ENST00000518140 TRAV21A0A0B4J279 112 aa17.33■□□□□ 0.37
SLIT3-204ENST00000518140 FOXI2Q6ZQN5 318 aa17.33■□□□□ 0.37
SLIT3-204ENST00000518140 STPG4Q8N801 248 aa17.33■□□□□ 0.37
SLIT3-204ENST00000518140 MSRB1Q9NZV6 116 aa17.33■□□□□ 0.37
SLIT3-204ENST00000518140 CRXO43186 299 aaPredicted RBP17.33■□□□□ 0.36
SLIT3-204ENST00000518140 NDUFA11Q86Y39 141 aa17.33■□□□□ 0.36
SLIT3-204ENST00000518140 SIGLEC8Q9NYZ4 499 aa17.33■□□□□ 0.36
SLIT3-204ENST00000518140 TRAV12-2A0A075B6T6 113 aa17.32■□□□□ 0.36
SLIT3-204ENST00000518140 LOC102724200A0A096LPH7 203 aaPredicted RBP17.32■□□□□ 0.36
SLIT3-204ENST00000518140 IGLL1P15814 213 aa17.32■□□□□ 0.36
SLIT3-204ENST00000518140 ANXA2RQ3ZCQ2 193 aa17.32■□□□□ 0.36
SLIT3-204ENST00000518140 SPATA12Q7Z6I5 190 aa17.32■□□□□ 0.36
SLIT3-204ENST00000518140 MAP6D1Q9H9H5 199 aa17.32■□□□□ 0.36
SLIT3-204ENST00000518140 IGHV1-24A0A0C4DH33 117 aa17.31■□□□□ 0.36
SLIT3-204ENST00000518140 AMTNQ6UX39 209 aa17.31■□□□□ 0.36
SLIT3-204ENST00000518140 TRAV12-3A0A0B4J271 114 aa17.3■□□□□ 0.36
SLIT3-204ENST00000518140 SPRY2O43597 315 aa17.3■□□□□ 0.36
SLIT3-204ENST00000518140 SAP30O75446 220 aa17.3■□□□□ 0.36
SLIT3-204ENST00000518140 TWIST1Q15672 202 aa17.3■□□□□ 0.36
SLIT3-204ENST00000518140 SPINK13Q1W4C9 94 aa17.3■□□□□ 0.36
SLIT3-204ENST00000518140 SPAG8Q99932 426 aaPredicted RBP17.3■□□□□ 0.36
SLIT3-204ENST00000518140 GNRH2O43555 120 aa17.3■□□□□ 0.36
SLIT3-204ENST00000518140 DMRTA1Q5VZB9 504 aa17.3■□□□□ 0.36
SLIT3-204ENST00000518140 FXYD7P58549 80 aa17.29■□□□□ 0.36
SLIT3-204ENST00000518140 GATD1Q8NB37 220 aa17.29■□□□□ 0.36
SLIT3-204ENST00000518140 TRAV25A0A0B4J276 109 aa17.28■□□□□ 0.36
SLIT3-204ENST00000518140 OR4C46A6NHA9 309 aa17.28■□□□□ 0.36
SLIT3-204ENST00000518140 DUSP14O95147 198 aaKnown RBP17.28■□□□□ 0.36
SLIT3-204ENST00000518140 LEPROTL1O95214 131 aa17.28■□□□□ 0.36
SLIT3-204ENST00000518140 ODF3Q96PU9 254 aa17.28■□□□□ 0.36
SLIT3-204ENST00000518140 ATRQ13535 2644 aa17.28■□□□□ 0.36
SLIT3-204ENST00000518140 A0A1B0GW15 77 aa17.28■□□□□ 0.36
SLIT3-204ENST00000518140 H3BMM0 161 aa17.28■□□□□ 0.36
SLIT3-204ENST00000518140 SYS1-DBNDD2H3BUS1 97 aa17.28■□□□□ 0.36
SLIT3-204ENST00000518140 OR5AL1P0C617 328 aa17.28■□□□□ 0.36
SLIT3-204ENST00000518140 LEPP41159 167 aa17.28■□□□□ 0.36
SLIT3-204ENST00000518140 OR10AG1Q8NH19 301 aa17.28■□□□□ 0.36
SLIT3-204ENST00000518140 CNFNQ9BYD5 112 aa17.28■□□□□ 0.36
SLIT3-204ENST00000518140 TIMM8BQ9Y5J9 83 aaPredicted RBP17.28■□□□□ 0.36
SLIT3-204ENST00000518140 RBMY1BA6NDE4 496 aaKnown RBP17.27■□□□□ 0.36
SLIT3-204ENST00000518140 RBMY1EA6NEQ0 496 aaKnown RBP17.27■□□□□ 0.36
SLIT3-204ENST00000518140 RBMY1DP0C7P1 496 aaKnown RBP17.27■□□□□ 0.36
SLIT3-204ENST00000518140 C7orf71A4D174 169 aa17.27■□□□□ 0.35
SLIT3-204ENST00000518140 H3BVH4 76 aa17.27■□□□□ 0.35
SLIT3-204ENST00000518140 HLA-DRB4P13762 266 aa17.27■□□□□ 0.35
SLIT3-204ENST00000518140 ODF3L2Q3SX64 289 aa17.27■□□□□ 0.35
SLIT3-204ENST00000518140 ZNF493Q6ZR52 646 aa17.27■□□□□ 0.35
SLIT3-204ENST00000518140 HLA-DRB4X5D2U9 266 aa17.27■□□□□ 0.35
SLIT3-204ENST00000518140 VWFP04275 2813 aa17.26■□□□□ 0.35
SLIT3-204ENST00000518140 CDKN1BP46527 198 aa17.26■□□□□ 0.35
SLIT3-204ENST00000518140 HINT1P49773 126 aaPredicted RBP17.25■□□□□ 0.35
SLIT3-204ENST00000518140 AMN1Q8IY45 258 aa17.25■□□□□ 0.35
SLIT3-204ENST00000518140 LINC00173Q6ZV60 143 aa17.25■□□□□ 0.35
SLIT3-204ENST00000518140 SPATA3Q8NHX4 192 aa17.25■□□□□ 0.35
SLIT3-204ENST00000518140 ORAOV1Q8WV07 137 aa17.25■□□□□ 0.35
SLIT3-204ENST00000518140 ST20Q9HBF5 79 aa17.25■□□□□ 0.35
SLIT3-204ENST00000518140 IGLV1-51P01701 117 aa17.24■□□□□ 0.35
SLIT3-204ENST00000518140 LINC00482Q8N8I6 264 aa17.24■□□□□ 0.35
SLIT3-204ENST00000518140 A8MTW9 85 aa17.23■□□□□ 0.35
SLIT3-204ENST00000518140 SNAI2O43623 268 aa17.23■□□□□ 0.35
SLIT3-204ENST00000518140 PF4P02776 101 aa17.23■□□□□ 0.35
SLIT3-204ENST00000518140 FAM104BQ5XKR9 115 aa17.23■□□□□ 0.35
SLIT3-204ENST00000518140 TMEM191AQ9H0A3 160 aa17.23■□□□□ 0.35
SLIT3-204ENST00000518140 RNASE3P12724 160 aaKnown RBP17.22■□□□□ 0.35
SLIT3-204ENST00000518140 PET117Q6UWS5 81 aa17.22■□□□□ 0.35
SLIT3-204ENST00000518140 MAP1LC3CQ9BXW4 147 aa17.22■□□□□ 0.35
SLIT3-204ENST00000518140 RBMY1A1P0DJD3 496 aaKnown RBP17.21■□□□□ 0.35
SLIT3-204ENST00000518140 RBMY1CP0DJD4 496 aa17.21■□□□□ 0.35
SLIT3-204ENST00000518140 ASIPP42127 132 aa17.21■□□□□ 0.35
SLIT3-204ENST00000518140 RBMY1FQ15415 496 aaKnown RBP17.21■□□□□ 0.35
SLIT3-204ENST00000518140 FAM159AQ6UWV7 190 aa17.21■□□□□ 0.35
SLIT3-204ENST00000518140 HSPB8Q9UJY1 196 aa17.21■□□□□ 0.35
SLIT3-204ENST00000518140 S100A4P26447 101 aaKnown RBP17.2■□□□□ 0.34
SLIT3-204ENST00000518140 CITED1Q99966 193 aa17.2■□□□□ 0.34
SLIT3-204ENST00000518140 EVI2AP22794 236 aa17.19■□□□□ 0.34
SLIT3-204ENST00000518140 MRPL51Q4U2R6 128 aaKnown RBP17.19■□□□□ 0.34
SLIT3-204ENST00000518140 SPANXN1Q5VSR9 72 aa17.19■□□□□ 0.34
SLIT3-204ENST00000518140 RNF185Q96GF1 192 aa17.19■□□□□ 0.34
SLIT3-204ENST00000518140 SCRT2Q9NQ03 307 aa17.19■□□□□ 0.34
SLIT3-204ENST00000518140 NOTCH3Q9UM47 2321 aa17.19■□□□□ 0.34
SLIT3-204ENST00000518140 CD7P09564 240 aa17.18■□□□□ 0.34
SLIT3-204ENST00000518140 COX11Q9Y6N1 276 aa17.18■□□□□ 0.34
SLIT3-204ENST00000518140 IGHV4-4A0A075B6R2 117 aa17.17■□□□□ 0.34
SLIT3-204ENST00000518140 hDV102S1A0JD36 115 aa17.17■□□□□ 0.34
SLIT3-204ENST00000518140 HSBP1L1C9JCN9 74 aa17.17■□□□□ 0.34
SLIT3-204ENST00000518140 D6R8Y8 96 aa17.17■□□□□ 0.34
SLIT3-204ENST00000518140 SMKR1H3BMG3 65 aa17.17■□□□□ 0.34
SLIT3-204ENST00000518140 OR11H12B2RN74 326 aa17.17■□□□□ 0.34
SLIT3-204ENST00000518140 M0R381 172 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms