RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 ZNF80P51504 273 aaPredicted RBP7.23□□□□□ -1.25
PDGFRB-203ENST00000517660 FLI1Q01543 452 aaPredicted RBP7.23□□□□□ -1.25
PDGFRB-203ENST00000517660 SAPCD1Q5SSQ6 148 aa7.23□□□□□ -1.25
PDGFRB-203ENST00000517660 CYB561D1Q8N8Q1 229 aa7.23□□□□□ -1.25
PDGFRB-203ENST00000517660 CTXND1A0A1B0GTU2 59 aa7.22□□□□□ -1.25
PDGFRB-203ENST00000517660 PFN1P07737 140 aaKnown RBP7.22□□□□□ -1.25
PDGFRB-203ENST00000517660 ZNF726P1Q15940 193 aa7.22□□□□□ -1.25
PDGFRB-203ENST00000517660 SMUG1Q53HV7 270 aa7.22□□□□□ -1.25
PDGFRB-203ENST00000517660 AKR1C8PQ5T2L2 129 aa7.22□□□□□ -1.25
PDGFRB-203ENST00000517660 PRNTQ86SH4 94 aa7.22□□□□□ -1.25
PDGFRB-203ENST00000517660 TMEM75Q8N9X5 138 aa7.22□□□□□ -1.25
PDGFRB-203ENST00000517660 TXNDC17Q9BRA2 123 aa7.22□□□□□ -1.25
PDGFRB-203ENST00000517660 C11orf21Q9P2W6 132 aa7.22□□□□□ -1.25
PDGFRB-203ENST00000517660 TRAV9-2A0A087WT02 112 aa7.21□□□□□ -1.26
PDGFRB-203ENST00000517660 EPM2AB3EWF7 344 aa7.21□□□□□ -1.26
PDGFRB-203ENST00000517660 C9JCJ5 164 aa7.21□□□□□ -1.26
PDGFRB-203ENST00000517660 TEX46H3BTG2 121 aa7.21□□□□□ -1.26
PDGFRB-203ENST00000517660 CIDEAO60543 219 aa7.21□□□□□ -1.26
PDGFRB-203ENST00000517660 LINC00315P59091 139 aa7.21□□□□□ -1.26
PDGFRB-203ENST00000517660 ZNF876PQ49A33 203 aa7.21□□□□□ -1.26
PDGFRB-203ENST00000517660 SH2D6Q7Z4S9 175 aa7.21□□□□□ -1.26
PDGFRB-203ENST00000517660 SPATA12Q7Z6I5 190 aa7.21□□□□□ -1.26
PDGFRB-203ENST00000517660 PTH2Q96A98 100 aa7.21□□□□□ -1.26
PDGFRB-203ENST00000517660 NKX6-2Q9C056 277 aaPredicted RBP7.21□□□□□ -1.26
PDGFRB-203ENST00000517660 RS1O15537 224 aa7.2□□□□□ -1.26
PDGFRB-203ENST00000517660 GATA1P15976 413 aaPredicted RBP7.2□□□□□ -1.26
PDGFRB-203ENST00000517660 PPT1P50897 306 aa7.2□□□□□ -1.26
PDGFRB-203ENST00000517660 BLOC1S1P78537 153 aa7.2□□□□□ -1.26
PDGFRB-203ENST00000517660 LINC00479Q96M42 142 aa7.2□□□□□ -1.26
PDGFRB-203ENST00000517660 C9orf85Q96MD7 179 aa7.2□□□□□ -1.26
PDGFRB-203ENST00000517660 LY96Q9Y6Y9 160 aa7.2□□□□□ -1.26
PDGFRB-203ENST00000517660 TRAV34A0A0B4J273 112 aa7.19□□□□□ -1.26
PDGFRB-203ENST00000517660 FABP5P3A8MUU1 101 aa7.19□□□□□ -1.26
PDGFRB-203ENST00000517660 KRBOX1C9JBD0 128 aa7.19□□□□□ -1.26
PDGFRB-203ENST00000517660 K7EP13 123 aa7.19□□□□□ -1.26
PDGFRB-203ENST00000517660 PEX7O00628 323 aa7.19□□□□□ -1.26
PDGFRB-203ENST00000517660 SULT1A2P50226 295 aa7.19□□□□□ -1.26
PDGFRB-203ENST00000517660 FGF8P55075 233 aaPredicted RBP7.19□□□□□ -1.26
PDGFRB-203ENST00000517660 TIRAPP58753 221 aa7.19□□□□□ -1.26
PDGFRB-203ENST00000517660 UBE2G2P60604 165 aa7.19□□□□□ -1.26
PDGFRB-203ENST00000517660 CFAP126Q5VTH2 177 aa7.19□□□□□ -1.26
PDGFRB-203ENST00000517660 Q6ZRN7 208 aaPredicted RBP7.19□□□□□ -1.26
PDGFRB-203ENST00000517660 NFE4Q86UQ8 179 aa7.19□□□□□ -1.26
PDGFRB-203ENST00000517660 HIST1H2BAQ96A08 127 aa7.19□□□□□ -1.26
PDGFRB-203ENST00000517660 PRADC1Q9BSG0 188 aa7.19□□□□□ -1.26
PDGFRB-203ENST00000517660 LOC100131303A0A0U1RQF7 123 aa7.18□□□□□ -1.26
PDGFRB-203ENST00000517660 TRBV6-4A0A1B0GX49 114 aa7.18□□□□□ -1.26
PDGFRB-203ENST00000517660 RAB19A4D1S5 217 aa7.18□□□□□ -1.26
PDGFRB-203ENST00000517660 MAP1LC3B2A6NCE7 125 aa7.18□□□□□ -1.26
PDGFRB-203ENST00000517660 PGPEP1LA6NFU8 196 aa7.18□□□□□ -1.26
PDGFRB-203ENST00000517660 FAM74A7A6NL05 159 aa7.18□□□□□ -1.26
PDGFRB-203ENST00000517660 EVI2AP22794 236 aa7.18□□□□□ -1.26
PDGFRB-203ENST00000517660 UQCC3Q6UW78 93 aa7.18□□□□□ -1.26
PDGFRB-203ENST00000517660 DPPA3Q6W0C5 159 aa7.18□□□□□ -1.26
PDGFRB-203ENST00000517660 WFDC10BQ8IUB3 73 aa7.18□□□□□ -1.26
PDGFRB-203ENST00000517660 NHLRC2Q8NBF2 726 aa7.18□□□□□ -1.26
PDGFRB-203ENST00000517660 MAP1LC3BQ9GZQ8 125 aa7.18□□□□□ -1.26
PDGFRB-203ENST00000517660 TNFRSF18Q9Y5U5 241 aa7.18□□□□□ -1.26
PDGFRB-203ENST00000517660 ARL2-SNX15V9GYD0 113 aa7.18□□□□□ -1.26
PDGFRB-203ENST00000517660 FLG2Q5D862 2391 aaPredicted RBP7.18□□□□□ -1.26
PDGFRB-203ENST00000517660 IGKV3D-20A0A0C4DH25 116 aa7.17□□□□□ -1.26
PDGFRB-203ENST00000517660 EREGO14944 169 aa7.17□□□□□ -1.26
PDGFRB-203ENST00000517660 SEC11BP0C7V7 166 aa7.17□□□□□ -1.26
PDGFRB-203ENST00000517660 DNAH10OSP0CZ25 163 aa7.17□□□□□ -1.26
PDGFRB-203ENST00000517660 RNASE3P12724 160 aaKnown RBP7.17□□□□□ -1.26
PDGFRB-203ENST00000517660 S100A4P26447 101 aaKnown RBP7.17□□□□□ -1.26
PDGFRB-203ENST00000517660 RAB5CP51148 216 aa7.17□□□□□ -1.26
PDGFRB-203ENST00000517660 KRTAP10-2P60368 255 aa7.17□□□□□ -1.26
PDGFRB-203ENST00000517660 RHOHQ15669 191 aa7.17□□□□□ -1.26
PDGFRB-203ENST00000517660 ZNF506Q5JVG8 444 aa7.17□□□□□ -1.26
PDGFRB-203ENST00000517660 PIK3CD-AS1Q5SR53 167 aa7.17□□□□□ -1.26
PDGFRB-203ENST00000517660 SLC25A29Q8N8R3 303 aa7.17□□□□□ -1.26
PDGFRB-203ENST00000517660 PGPEP1Q9NXJ5 209 aa7.17□□□□□ -1.26
PDGFRB-203ENST00000517660 ZFP30Q9Y2G7 519 aa7.17□□□□□ -1.26
PDGFRB-203ENST00000517660 IGHV3-73A0A0B4J1V6 119 aa7.16□□□□□ -1.26
PDGFRB-203ENST00000517660 ASIPP42127 132 aa7.16□□□□□ -1.26
PDGFRB-203ENST00000517660 FHITP49789 147 aa7.16□□□□□ -1.26
PDGFRB-203ENST00000517660 ERVFC1-1P60608 527 aa7.16□□□□□ -1.26
PDGFRB-203ENST00000517660 COX8CQ7Z4L0 72 aa7.16□□□□□ -1.26
PDGFRB-203ENST00000517660 Q86TA4 180 aa7.16□□□□□ -1.26
PDGFRB-203ENST00000517660 C10orf126Q8N4M7 172 aa7.16□□□□□ -1.26
PDGFRB-203ENST00000517660 TCEAL7Q9BRU2 100 aa7.16□□□□□ -1.26
PDGFRB-203ENST00000517660 MSRB1Q9NZV6 116 aa7.16□□□□□ -1.26
PDGFRB-203ENST00000517660 TRAV8-6A0A0B4J262 113 aa7.15□□□□□ -1.26
PDGFRB-203ENST00000517660 TRBV6-1A0A0K0K1D8 114 aa7.15□□□□□ -1.26
PDGFRB-203ENST00000517660 A8MWV9 139 aa7.15□□□□□ -1.26
PDGFRB-203ENST00000517660 B4DEV8 164 aa7.15□□□□□ -1.26
PDGFRB-203ENST00000517660 CRYGDP07320 174 aa7.15□□□□□ -1.26
PDGFRB-203ENST00000517660 MGST1P10620 155 aaKnown RBP7.15□□□□□ -1.26
PDGFRB-203ENST00000517660 CRIP1P50238 77 aa7.15□□□□□ -1.26
PDGFRB-203ENST00000517660 CST9LP1Q5W188 147 aa7.15□□□□□ -1.26
PDGFRB-203ENST00000517660 ZFP2Q6ZN57 461 aa7.15□□□□□ -1.26
PDGFRB-203ENST00000517660 MBD3L1Q8WWY6 194 aa7.15□□□□□ -1.26
PDGFRB-203ENST00000517660 FMC1Q96HJ9 113 aa7.15□□□□□ -1.26
PDGFRB-203ENST00000517660 IL36BQ9NZH7 164 aa7.15□□□□□ -1.26
PDGFRB-203ENST00000517660 IGHV3-38A0A0C4DH36 116 aa7.14□□□□□ -1.27
PDGFRB-203ENST00000517660 UMAD1C9J7I0 102 aa7.14□□□□□ -1.27
PDGFRB-203ENST00000517660 UBE2G1P62253 170 aa7.14□□□□□ -1.27
PDGFRB-203ENST00000517660 LINC01556Q5JQF7 62 aa7.14□□□□□ -1.27
PDGFRB-203ENST00000517660 DNLZQ5SXM8 178 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms