RNA–Protein interactions for RNA: ENST00000517522.1

MSR1-206, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 3

Gene MSR1, Length 403 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-206ENST00000517522 PCBD1P61457 104 aa0.37□□□□□ -2.35
MSR1-206ENST00000517522 SNRPD3P62318 126 aaKnown RBP0.37□□□□□ -2.35
MSR1-206ENST00000517522 RPS25P62851 125 aaKnown RBP0.37□□□□□ -2.35
MSR1-206ENST00000517522 PRB3Q04118 309 aaPredicted RBP0.37□□□□□ -2.35
MSR1-206ENST00000517522 SPRNQ5BIV9 151 aa0.37□□□□□ -2.35
MSR1-206ENST00000517522 DYNLRB2Q8TF09 96 aa0.37□□□□□ -2.35
MSR1-206ENST00000517522 DPH3Q96FX2 82 aa0.37□□□□□ -2.35
MSR1-206ENST00000517522 LPAR5Q9H1C0 372 aa0.37□□□□□ -2.35
MSR1-206ENST00000517522 ATG5Q9H1Y0 275 aa0.37□□□□□ -2.35
MSR1-206ENST00000517522 BANF2Q9H503 90 aa0.37□□□□□ -2.35
MSR1-206ENST00000517522 CCDC167Q9P0B6 97 aa0.37□□□□□ -2.35
MSR1-206ENST00000517522 MRPL36Q9P0J6 103 aaKnown RBP0.37□□□□□ -2.35
MSR1-206ENST00000517522 LSM2Q9Y333 95 aaKnown RBP0.37□□□□□ -2.35
MSR1-206ENST00000517522 DOCK11Q5JSL3 2073 aa0.37□□□□□ -2.35
MSR1-206ENST00000517522 AHCTF1Q8WYP5 2266 aa0.36□□□□□ -2.35
MSR1-206ENST00000517522 JMJD1CQ15652 2540 aa0.36□□□□□ -2.35
MSR1-206ENST00000517522 TRBV10-1A0A0K0K1A3 114 aa0.36□□□□□ -2.35
MSR1-206ENST00000517522 NBDYA0A0U1RRE5 68 aa0.36□□□□□ -2.35
MSR1-206ENST00000517522 NCR3O14931 201 aa0.36□□□□□ -2.35
MSR1-206ENST00000517522 EDF1O60869 148 aaKnown RBP0.36□□□□□ -2.35
MSR1-206ENST00000517522 CAV3P56539 151 aa0.36□□□□□ -2.35
MSR1-206ENST00000517522 COPZ1P61923 177 aa0.36□□□□□ -2.35
MSR1-206ENST00000517522 EMX2Q04743 252 aa0.36□□□□□ -2.35
MSR1-206ENST00000517522 NEDD8Q15843 81 aa0.36□□□□□ -2.35
MSR1-206ENST00000517522 CSAG1Q6PB30 78 aa0.36□□□□□ -2.35
MSR1-206ENST00000517522 Q8N6K4 173 aa0.36□□□□□ -2.35
MSR1-206ENST00000517522 VSTM2AQ8TAG5 236 aa0.36□□□□□ -2.35
MSR1-206ENST00000517522 PPP1R1CQ8WVI7 109 aa0.36□□□□□ -2.35
MSR1-206ENST00000517522 WFDC10AQ9H1F0 79 aa0.36□□□□□ -2.35
MSR1-206ENST00000517522 CTTNBP2Q8WZ74 1663 aa0.36□□□□□ -2.35
MSR1-206ENST00000517522 CCDC171Q6TFL3 1326 aa0.36□□□□□ -2.35
MSR1-206ENST00000517522 BDP1A6H8Y1 2624 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 APCP25054 2843 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 LAMB1P07942 1786 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 CASZ1Q86V15 1759 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 CACNA1EQ15878 2313 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.35□□□□□ -2.35
MSR1-206ENST00000517522 TRAV12-2A0A075B6T6 113 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 LOC107984156A0A0G2JMH3 177 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 FAM236AA0A1B0GUQ0 79 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 FAM236BA0A1B0GV22 79 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 MCRIP1C9JLW8 97 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 ZNF670-ZNF695F2Z2N8 137 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 J3QLW9 94 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 CCKP06307 115 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 FGF7P21781 194 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 RRAS2P62070 204 aaPredicted RBP0.35□□□□□ -2.35
MSR1-206ENST00000517522 KLKP1Q107X0 134 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 SPINK13Q1W4C9 94 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 OR2T2Q6IF00 324 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 Q6ZQY7 126 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 Q6ZS92 163 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 ARL17AQ8IVW1 177 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 SNRNP25Q9BV90 132 aaKnown RBP0.35□□□□□ -2.35
MSR1-206ENST00000517522 LINC00470Q9BZP3 86 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 NOP16Q9Y3C1 178 aaKnown RBP0.35□□□□□ -2.35
MSR1-206ENST00000517522 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 BLMP54132 1417 aaPredicted RBP0.35□□□□□ -2.35
MSR1-206ENST00000517522 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.35□□□□□ -2.35
MSR1-206ENST00000517522 PLXNA1Q9UIW2 1896 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 NOTCH1P46531 2555 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 GRIN2AQ12879 1464 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 KDM6BO15054 1643 aa0.35□□□□□ -2.35
MSR1-206ENST00000517522 PHRF1Q9P1Y6 1649 aaKnown RBP0.35□□□□□ -2.35
MSR1-206ENST00000517522 DLEC1Q9Y238 1755 aa0.34□□□□□ -2.35
MSR1-206ENST00000517522 PI4KAP42356 2102 aa0.34□□□□□ -2.35
MSR1-206ENST00000517522 TRBV30A0A0K0K1B3 111 aa0.34□□□□□ -2.36
MSR1-206ENST00000517522 DNAL4O96015 105 aa0.34□□□□□ -2.36
MSR1-206ENST00000517522 APODP05090 189 aa0.34□□□□□ -2.36
MSR1-206ENST00000517522 SLC25A6P12236 298 aa0.34□□□□□ -2.36
MSR1-206ENST00000517522 POLR2JP52435 117 aaKnown RBP0.34□□□□□ -2.36
MSR1-206ENST00000517522 FXYD6P3P58550 94 aa0.34□□□□□ -2.36
MSR1-206ENST00000517522 FXYD3Q14802 87 aa0.34□□□□□ -2.36
MSR1-206ENST00000517522 SPINK9Q5DT21 86 aa0.34□□□□□ -2.36
MSR1-206ENST00000517522 CLLU1Q5K131 121 aa0.34□□□□□ -2.36
MSR1-206ENST00000517522 SPANXN1Q5VSR9 72 aa0.34□□□□□ -2.36
MSR1-206ENST00000517522 C4orf33Q8N1A6 199 aa0.34□□□□□ -2.36
MSR1-206ENST00000517522 C5orf56Q8N8D9 126 aa0.34□□□□□ -2.36
MSR1-206ENST00000517522 PLAC4Q8WY50 150 aa0.34□□□□□ -2.36
MSR1-206ENST00000517522 TMEM141Q96I45 108 aa0.34□□□□□ -2.36
MSR1-206ENST00000517522 CCL19Q99731 98 aa0.34□□□□□ -2.36
MSR1-206ENST00000517522 SPANXDQ9BXN6 97 aa0.34□□□□□ -2.36
MSR1-206ENST00000517522 SMIM3Q9BZL3 60 aa0.34□□□□□ -2.36
MSR1-206ENST00000517522 F5P12259 2224 aa0.34□□□□□ -2.36
MSR1-206ENST00000517522 AFDNP55196 1824 aaKnown RBP0.34□□□□□ -2.36
MSR1-206ENST00000517522 ZNF142P52746 1687 aaPredicted RBP0.33□□□□□ -2.36
MSR1-206ENST00000517522 CACNA1HO95180 2353 aa0.33□□□□□ -2.36
MSR1-206ENST00000517522 BICRAQ9NZM4 1560 aa0.33□□□□□ -2.36
MSR1-206ENST00000517522 DAPK1P53355 1430 aa0.33□□□□□ -2.36
MSR1-206ENST00000517522 NCOA3Q9Y6Q9 1424 aa0.33□□□□□ -2.36
MSR1-206ENST00000517522 TRAV23DV6A0A075B6W5 121 aa0.33□□□□□ -2.36
MSR1-206ENST00000517522 FAM92AA1XBS5 289 aa0.33□□□□□ -2.36
MSR1-206ENST00000517522 K7ERU9 68 aa0.33□□□□□ -2.36
MSR1-206ENST00000517522 APOC1P02654 83 aa0.33□□□□□ -2.36
MSR1-206ENST00000517522 PRB4P10163 310 aaPredicted RBP0.33□□□□□ -2.36
MSR1-206ENST00000517522 RPL37AP61513 92 aaKnown RBP0.33□□□□□ -2.36
MSR1-206ENST00000517522 ZNF56Q15929 161 aa0.33□□□□□ -2.36
MSR1-206ENST00000517522 C9orf116Q5BN46 136 aaPredicted RBP0.33□□□□□ -2.36
MSR1-206ENST00000517522 Q5VV11 94 aa0.33□□□□□ -2.36
MSR1-206ENST00000517522 RPL13AP3Q6NVV1 102 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms