RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 HIST1H2BAQ96A08 127 aa4.56□□□□□ -1.68
NPHP3-211ENST00000515289 FAM103A1Q9BTL3 118 aaKnown RBP4.56□□□□□ -1.68
NPHP3-211ENST00000515289 MRPL32Q9BYC8 188 aaKnown RBP4.56□□□□□ -1.68
NPHP3-211ENST00000515289 RPS10P5Q9NQ39 176 aa4.56□□□□□ -1.68
NPHP3-211ENST00000515289 KLK9Q9UKQ9 250 aa4.56□□□□□ -1.68
NPHP3-211ENST00000515289 ARL2-SNX15V9GYD0 113 aa4.56□□□□□ -1.68
NPHP3-211ENST00000515289 LOC102724200A0A096LPH7 203 aaPredicted RBP4.55□□□□□ -1.68
NPHP3-211ENST00000515289 IGHV3-21A0A0B4J1V1 117 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 TRAV5A0A0B4J249 113 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 TRAV40A0A0B4J280 105 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 ZNF727A8MUV8 499 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 F6UZH7 168 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 LGALS9O00182 355 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 CNIH1O95406 144 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 IGKV1-17P01599 117 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 APCSP02743 223 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 MSMBP08118 114 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 SCGB1C2P0DMR2 95 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 SLC25A16P16260 332 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 KRTAP10-9P60411 292 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 CENPWQ5EE01 88 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 RNASE13Q5GAN3 156 aaKnown RBP4.55□□□□□ -1.68
NPHP3-211ENST00000515289 SCGB1D4Q6XE38 83 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 TTC9CQ8N5M4 171 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 OR4X1Q8NH49 305 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 SMIM7Q9BQ49 75 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 HSPB9Q9BQS6 159 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 TXNDC17Q9BRA2 123 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 DOK5Q9P104 306 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 NAT8Q9UHE5 227 aa4.55□□□□□ -1.68
NPHP3-211ENST00000515289 TRBV20OR9-2A0A075B6H5 130 aa4.54□□□□□ -1.68
NPHP3-211ENST00000515289 B4DEV8 164 aa4.54□□□□□ -1.68
NPHP3-211ENST00000515289 GGTLC3B5MD39 225 aa4.54□□□□□ -1.68
NPHP3-211ENST00000515289 PDE6DO43924 150 aa4.54□□□□□ -1.68
NPHP3-211ENST00000515289 BRS3P32247 399 aa4.54□□□□□ -1.68
NPHP3-211ENST00000515289 TAS2R45P59539 299 aa4.54□□□□□ -1.68
NPHP3-211ENST00000515289 DAD1P61803 113 aa4.54□□□□□ -1.68
NPHP3-211ENST00000515289 LOXL1Q08397 574 aaPredicted RBP4.54□□□□□ -1.68
NPHP3-211ENST00000515289 FAM222AQ5U5X8 452 aa4.54□□□□□ -1.68
NPHP3-211ENST00000515289 NTM-AS1Q6ZSK4 140 aa4.54□□□□□ -1.68
NPHP3-211ENST00000515289 C5orf56Q8N8D9 126 aa4.54□□□□□ -1.68
NPHP3-211ENST00000515289 DERL1Q9BUN8 251 aa4.54□□□□□ -1.68
NPHP3-211ENST00000515289 TMEM167BQ9NRX6 74 aa4.54□□□□□ -1.68
NPHP3-211ENST00000515289 ZNF355PQ9NSJ1 428 aa4.54□□□□□ -1.68
NPHP3-211ENST00000515289 SOX21Q9Y651 276 aaPredicted RBP4.54□□□□□ -1.68
NPHP3-211ENST00000515289 UBR5O95071 2799 aaPredicted RBP4.54□□□□□ -1.68
NPHP3-211ENST00000515289 FLNCQ14315 2725 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 TGIF2-C20orf24A0A0A6YYL0 155 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 SMIM9A6NGZ8 99 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 B4DSR2 109 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 OR7C2O60412 319 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 MT-ND4LP03901 98 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 CRYBA1P05813 215 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 PYYP10082 97 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 MP68P56378 58 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 TMEM241Q24JQ0 296 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 RNF212Q495C1 297 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 C10orf113Q5VZT2 155 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 BRD3OSQ6XYD6 125 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 LINC01551Q86U37 167 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 TMEM256Q8N2U0 113 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 SGMS2Q8NHU3 365 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 PFDN5Q99471 154 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 SND1-IT1Q9HBX3 110 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 LRBAP50851 2863 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 FAM208BQ5VWN6 2430 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 SPG11Q96JI7 2443 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 MYO18BQ8IUG5 2567 aa4.53□□□□□ -1.68
NPHP3-211ENST00000515289 COL12A1Q99715 3063 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 FBN2P35556 2912 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 A0A1W2PRE2 83 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 WI2-2373I1.2A0A1W2PRP0 233 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 C9JCJ5 164 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 TMEM238C9JI98 176 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 H3BRN7 92 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 HYPMO75409 117 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 ATP5G1P05496 136 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 CXCL1P09341 107 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 OR10J4P0C629 311 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 ORM2P19652 201 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 KRTAP10-11P60412 298 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 RAB5BP61020 215 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 UBE2L3P68036 154 aaKnown RBP4.52□□□□□ -1.69
NPHP3-211ENST00000515289 FLI1Q01543 452 aaPredicted RBP4.52□□□□□ -1.69
NPHP3-211ENST00000515289 ELOBQ15370 118 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 ADIRFQ15847 76 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 Q6ZR54 194 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 FA2HQ7L5A8 372 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 LINC00305Q7Z4B0 112 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 ORMDL3Q8N138 153 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 FAM24BQ8N5W8 94 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 Q8WTZ3 238 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 PYGO2Q9BRQ0 406 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 CHCHD7Q9BUK0 85 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 TMEM242Q9NWH2 141 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 MRPL27Q9P0M9 148 aaKnown RBP4.52□□□□□ -1.69
NPHP3-211ENST00000515289 LRRK2Q5S007 2527 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 WNK2Q9Y3S1 2297 aa4.52□□□□□ -1.69
NPHP3-211ENST00000515289 PTPN13Q12923 2485 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms