RNA–Protein interactions for RNA: ENST00000515011.5

PDE4D-223, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,175 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-223ENST00000515011 FLNAP21333 2647 aaKnown RBP17.02■□□□□ 0.32
PDE4D-223ENST00000515011 IGLL1P15814 213 aa17.02■□□□□ 0.32
PDE4D-223ENST00000515011 C2orf88Q9BSF0 95 aa17.02■□□□□ 0.32
PDE4D-223ENST00000515011 TRAV12-3A0A0B4J271 114 aa17.02■□□□□ 0.31
PDE4D-223ENST00000515011 DUX3Q96PT4 197 aa17.02■□□□□ 0.31
PDE4D-223ENST00000515011 SNHG12Q9BXW3 62 aa17.02■□□□□ 0.31
PDE4D-223ENST00000515011 TLN2Q9Y4G6 2542 aa17.02■□□□□ 0.31
PDE4D-223ENST00000515011 CCDC168Q8NDH2 2452 aa17.02■□□□□ 0.31
PDE4D-223ENST00000515011 TRAV2A0A0B4J234 112 aa17.01■□□□□ 0.31
PDE4D-223ENST00000515011 TRAV26-2A0A0B4J265 109 aa17.01■□□□□ 0.31
PDE4D-223ENST00000515011 SPRY2O43597 315 aa17.01■□□□□ 0.31
PDE4D-223ENST00000515011 Q8N8P6 123 aa17.01■□□□□ 0.31
PDE4D-223ENST00000515011 DPH3P1Q9H4G8 78 aa17.01■□□□□ 0.31
PDE4D-223ENST00000515011 IGLV2-18A0A075B6J9 118 aa17.01■□□□□ 0.31
PDE4D-223ENST00000515011 DLX4Q92988 240 aaPredicted RBP17.01■□□□□ 0.31
PDE4D-223ENST00000515011 H0Y8G0 127 aa17■□□□□ 0.31
PDE4D-223ENST00000515011 M0R143 59 aa17■□□□□ 0.31
PDE4D-223ENST00000515011 IGKV3-20P01619 116 aa17■□□□□ 0.31
PDE4D-223ENST00000515011 TSPOP30536 169 aa17■□□□□ 0.31
PDE4D-223ENST00000515011 FXYD7P58549 80 aa17■□□□□ 0.31
PDE4D-223ENST00000515011 CDKN1BP46527 198 aa16.99■□□□□ 0.31
PDE4D-223ENST00000515011 AP1S3Q96PC3 154 aa16.99■□□□□ 0.31
PDE4D-223ENST00000515011 MCRIP2Q9BUT9 160 aaKnown RBP16.99■□□□□ 0.31
PDE4D-223ENST00000515011 AMTNQ6UX39 209 aa16.98■□□□□ 0.31
PDE4D-223ENST00000515011 FCER1GP30273 86 aa16.98■□□□□ 0.31
PDE4D-223ENST00000515011 ST20Q9HBF5 79 aa16.98■□□□□ 0.31
PDE4D-223ENST00000515011 RNASE1P07998 156 aaKnown RBP16.97■□□□□ 0.31
PDE4D-223ENST00000515011 C14orf178Q8N769 122 aaPredicted RBP16.97■□□□□ 0.31
PDE4D-223ENST00000515011 NOTCH2Q04721 2471 aa16.97■□□□□ 0.31
PDE4D-223ENST00000515011 SONP18583 2426 aaKnown RBP16.97■□□□□ 0.31
PDE4D-223ENST00000515011 TRAV12-2A0A075B6T6 113 aa16.96■□□□□ 0.31
PDE4D-223ENST00000515011 CD7P09564 240 aa16.96■□□□□ 0.31
PDE4D-223ENST00000515011 SPINK13Q1W4C9 94 aa16.96■□□□□ 0.31
PDE4D-223ENST00000515011 TMEM61Q8N0U2 210 aa16.96■□□□□ 0.31
PDE4D-223ENST00000515011 SETXQ7Z333 2677 aaKnown RBP16.96■□□□□ 0.31
PDE4D-223ENST00000515011 SCGB2A2Q13296 93 aa16.96■□□□□ 0.31
PDE4D-223ENST00000515011 HIST2H2BDQ6DRA6 164 aa16.96■□□□□ 0.31
PDE4D-223ENST00000515011 IFI27L1Q96BM0 104 aa16.96■□□□□ 0.31
PDE4D-223ENST00000515011 hDV102S1A0JD36 115 aa16.95■□□□□ 0.3
PDE4D-223ENST00000515011 MYO9AB2RTY4 2548 aa16.95■□□□□ 0.3
PDE4D-223ENST00000515011 A8MTW9 85 aa16.95■□□□□ 0.3
PDE4D-223ENST00000515011 LGALS9BQ3B8N2 356 aa16.95■□□□□ 0.3
PDE4D-223ENST00000515011 LGALS9CQ6DKI2 356 aa16.95■□□□□ 0.3
PDE4D-223ENST00000515011 Q6ZN92 141 aa16.95■□□□□ 0.3
PDE4D-223ENST00000515011 POM121L12Q8N7R1 296 aa16.95■□□□□ 0.3
PDE4D-223ENST00000515011 DYNLRB2Q8TF09 96 aa16.95■□□□□ 0.3
PDE4D-223ENST00000515011 PMCHL2Q9BQD1 86 aa16.95■□□□□ 0.3
PDE4D-223ENST00000515011 C16orf95Q9H693 158 aa16.95■□□□□ 0.3
PDE4D-223ENST00000515011 IGHV3-16A0A0C4DH30 117 aa16.94■□□□□ 0.3
PDE4D-223ENST00000515011 HSBP1L1C9JCN9 74 aa16.94■□□□□ 0.3
PDE4D-223ENST00000515011 DEFB131AP59861 70 aa16.94■□□□□ 0.3
PDE4D-223ENST00000515011 FHL3Q13643 280 aa16.94■□□□□ 0.3
PDE4D-223ENST00000515011 RAX2Q96IS3 184 aa16.94■□□□□ 0.3
PDE4D-223ENST00000515011 RASL10AQ92737 203 aa16.94■□□□□ 0.3
PDE4D-223ENST00000515011 C9orf85Q96MD7 179 aa16.94■□□□□ 0.3
PDE4D-223ENST00000515011 HLA-DRB4P13762 266 aa16.93■□□□□ 0.3
PDE4D-223ENST00000515011 HNRNPA3P51991 378 aaKnown RBP16.93■□□□□ 0.3
PDE4D-223ENST00000515011 DEFB114Q30KQ6 69 aa16.93■□□□□ 0.3
PDE4D-223ENST00000515011 KIF25-AS1Q9Y6Z4 181 aa16.93■□□□□ 0.3
PDE4D-223ENST00000515011 HLA-DRB4X5D2U9 266 aa16.93■□□□□ 0.3
PDE4D-223ENST00000515011 IGHV1OR15-1A0A075B7D0 117 aa16.92■□□□□ 0.3
PDE4D-223ENST00000515011 KNCNA6PVL3 124 aa16.92■□□□□ 0.3
PDE4D-223ENST00000515011 MGPP08493 103 aa16.92■□□□□ 0.3
PDE4D-223ENST00000515011 CD28P10747 220 aa16.92■□□□□ 0.3
PDE4D-223ENST00000515011 TMEM158Q8WZ71 300 aa16.92■□□□□ 0.3
PDE4D-223ENST00000515011 SMIM2Q9BVW6 85 aa16.92■□□□□ 0.3
PDE4D-223ENST00000515011 TMEM160Q9NX00 188 aa16.92■□□□□ 0.3
PDE4D-223ENST00000515011 LURAP1LQ8IV03 231 aa16.92■□□□□ 0.3
PDE4D-223ENST00000515011 C20orf78Q9BR46 151 aa16.92■□□□□ 0.3
PDE4D-223ENST00000515011 MUC4Q99102 2169 aa16.92■□□□□ 0.3
PDE4D-223ENST00000515011 LAGE3Q14657 143 aa16.91■□□□□ 0.3
PDE4D-223ENST00000515011 LINC00315P59091 139 aa16.91■□□□□ 0.3
PDE4D-223ENST00000515011 LINC01006Q8NI28 216 aa16.91■□□□□ 0.3
PDE4D-223ENST00000515011 GOLT1BQ9Y3E0 138 aa16.91■□□□□ 0.3
PDE4D-223ENST00000515011 A0A1B0GV90 55 aa16.9■□□□□ 0.3
PDE4D-223ENST00000515011 Q8N1Y9 231 aa16.9■□□□□ 0.3
PDE4D-223ENST00000515011 C11orf44Q8N8P7 122 aa16.9■□□□□ 0.3
PDE4D-223ENST00000515011 H3BMM0 161 aa16.89■□□□□ 0.3
PDE4D-223ENST00000515011 SUMO2P61956 95 aaKnown RBP16.89■□□□□ 0.3
PDE4D-223ENST00000515011 AKAP9Q99996 3911 aa16.89■□□□□ 0.29
PDE4D-223ENST00000515011 AGRNO00468 2067 aa16.89■□□□□ 0.29
PDE4D-223ENST00000515011 ANK3Q12955 4377 aaKnown RBP16.89■□□□□ 0.29
PDE4D-223ENST00000515011 RPL39LQ96EH5 51 aaKnown RBP16.89■□□□□ 0.29
PDE4D-223ENST00000515011 C18orf15Q96N68 181 aa16.89■□□□□ 0.29
PDE4D-223ENST00000515011 MAP6D1Q9H9H5 199 aa16.89■□□□□ 0.29
PDE4D-223ENST00000515011 MDFICQ9P1T7 246 aa16.89■□□□□ 0.29
PDE4D-223ENST00000515011 A0A1W2PRX2 142 aa16.88■□□□□ 0.29
PDE4D-223ENST00000515011 CCL24O00175 119 aa16.88■□□□□ 0.29
PDE4D-223ENST00000515011 PPP1R17O96001 155 aa16.88■□□□□ 0.29
PDE4D-223ENST00000515011 CD300EQ496F6 205 aaPredicted RBP16.88■□□□□ 0.29
PDE4D-223ENST00000515011 ZNF418Q8TF45 676 aaPredicted RBP16.88■□□□□ 0.29
PDE4D-223ENST00000515011 MRPS16Q9Y3D3 137 aaKnown RBP16.88■□□□□ 0.29
PDE4D-223ENST00000515011 TCAPO15273 167 aa16.88■□□□□ 0.29
PDE4D-223ENST00000515011 SMIM17P0DL12 118 aa16.88■□□□□ 0.29
PDE4D-223ENST00000515011 SPAG8Q99932 426 aaPredicted RBP16.88■□□□□ 0.29
PDE4D-223ENST00000515011 TSSC4Q9Y5U2 329 aaPredicted RBP16.88■□□□□ 0.29
PDE4D-223ENST00000515011 HILS1P60008 231 aa16.87■□□□□ 0.29
PDE4D-223ENST00000515011 CITED2Q99967 270 aaPredicted RBP16.87■□□□□ 0.29
PDE4D-223ENST00000515011 RBMY1BA6NDE4 496 aaKnown RBP16.87■□□□□ 0.29
PDE4D-223ENST00000515011 RBMY1EA6NEQ0 496 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms