RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 HIGD2BQ4VC39 106 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 MUC21Q5SSG8 566 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 C22orf42Q6IC83 251 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 LHFPL1Q86WI0 220 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 BPIFA4PQ86YQ2 179 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 SELENOHQ8IZQ5 122 aaKnown RBP2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 Q8N377 158 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 OR4C5Q8NGB2 326 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 OR10P1Q8NGE3 313 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 OR5H6Q8NGV6 325 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 GPX8Q8TED1 209 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 GLYATL2Q8WU03 294 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 C7orf33Q8WU49 177 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 SLC25A38Q96DW6 304 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 DPH3Q96FX2 82 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 ZC2HC1AQ96GY0 325 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 FAM19A4Q96LR4 140 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 CHCHD7Q9BUK0 85 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 FUNDC2Q9BWH2 189 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 VCX2Q9H322 139 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 OR51M1Q9H341 326 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 MRPL16Q9NX20 251 aaKnown RBP2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 HIGD1AQ9Y241 93 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 PXMP4Q9Y6I8 212 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 FAM231BA6NCW3 169 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 MEIS3P1A6NDR6 274 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 ANKRD65E5RJM6 399 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 WRBO00258 174 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 ZNF253O75346 499 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 IL5P05113 134 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 KRTAP1-4P0C5Y4 121 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 OR10J4P0C629 311 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 SFTA3P0C7M3 94 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 GATA1P15976 413 aaPredicted RBP2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 AKR1C4P17516 323 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 RNASE4P34096 147 aaKnown RBP2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 CCR6P51684 374 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 NDUFV3P56181 108 aaKnown RBP2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 RAB31Q13636 194 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 IL18Q14116 193 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 SP6Q3SY56 376 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 ERASQ7Z444 233 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 DAZ4Q86SG3 579 aaKnown RBP2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 ZNF664Q8N3J9 261 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 TERB2Q8NHR7 220 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 YIPF6Q96EC8 236 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 SOSTQ9BQB4 213 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 PRADC1Q9BSG0 188 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 PARD6GQ9BYG4 376 aaPredicted RBP2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 DAZ3Q9NR90 486 aaKnown RBP2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 TXNL4BQ9NX01 149 aaKnown RBP2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 PLAC8Q9NZF1 115 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 PSORS1C2Q9UIG4 136 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 KCNIP3Q9Y2W7 256 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 URGCP-MRPS24S4R325 110 aa2.26□□□□□ -2.05
PDLIM5-218ENST00000513341 A0A0B4J2A0 478 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 SMIM31A0A1B0GVY4 71 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 K7EPK0 472 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 TNFAIP8O95379 198 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 OR5G3P0C626 314 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 TBPP20226 339 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 SDC2P34741 201 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 SURF2Q15527 256 aaPredicted RBP2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 RHOHQ15669 191 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 CYP2G1PQ6ZSU1 146 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 NIT1Q86X76 327 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 SLC25A29Q8N8R3 303 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 OR51S1Q8NGJ8 323 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 LHFPL5Q8TAF8 219 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 MARCH1Q8TCQ1 289 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 CIB3Q96Q77 187 aaPredicted RBP2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 SRRQ9GZT4 340 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 AGPAT4-IT1Q9H0P7 198 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 ARV1Q9H2C2 271 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 RBKSQ9H477 322 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 NPVFQ9HCQ7 196 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 SLC39A9Q9NUM3 307 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 SHPKQ9UHJ6 478 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 KIF25-AS1Q9Y6Z4 181 aa2.25□□□□□ -2.05
PDLIM5-218ENST00000513341 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 TRAV26-2A0A0B4J265 109 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 LOC100131303A0A0U1RQF7 123 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 PGPA6NDG6 321 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 FBLL1A6NHQ2 334 aaKnown RBP2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 FNDC10F2Z333 226 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 M0R2P5 195 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 PHOX2AO14813 284 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 MED6O75586 246 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 APOA1P02647 267 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 OR4E1P0C645 316 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 LINC00869P0C866 280 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 IGLC2P0DOY2 106 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 HIST1H1EP10412 219 aaKnown RBP2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 MGST1P10620 155 aaKnown RBP2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 CNBPP62633 177 aaKnown RBP2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 BTN1A1Q13410 526 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 SMCO1Q147U7 214 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 RGS21Q2M5E4 152 aa2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 RNASE10Q5GAN6 216 aaKnown RBP2.24□□□□□ -2.05
PDLIM5-218ENST00000513341 UBE2NLQ5JXB2 153 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 172.7 ms