RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 NXPH4O95158 308 aa9.75□□□□□ -0.85
DEPDC1B-206ENST00000512452 SCGB1D1O95968 90 aa9.75□□□□□ -0.85
DEPDC1B-206ENST00000512452 S100A4P26447 101 aaKnown RBP9.75□□□□□ -0.85
DEPDC1B-206ENST00000512452 CKS2P33552 79 aa9.75□□□□□ -0.85
DEPDC1B-206ENST00000512452 DEFB1P60022 68 aa9.75□□□□□ -0.85
DEPDC1B-206ENST00000512452 DEFB114Q30KQ6 69 aa9.75□□□□□ -0.85
DEPDC1B-206ENST00000512452 SPANXN1Q5VSR9 72 aa9.75□□□□□ -0.85
DEPDC1B-206ENST00000512452 RNF185Q96GF1 192 aa9.75□□□□□ -0.85
DEPDC1B-206ENST00000512452 CLUHP3Q96NS8 147 aa9.75□□□□□ -0.85
DEPDC1B-206ENST00000512452 TSTD3H0UI37 97 aa9.74□□□□□ -0.85
DEPDC1B-206ENST00000512452 H3BVH4 76 aa9.74□□□□□ -0.85
DEPDC1B-206ENST00000512452 CDKN1BP46527 198 aa9.74□□□□□ -0.85
DEPDC1B-206ENST00000512452 FAM159AQ6UWV7 190 aa9.74□□□□□ -0.85
DEPDC1B-206ENST00000512452 FA2HQ7L5A8 372 aa9.74□□□□□ -0.85
DEPDC1B-206ENST00000512452 TMEM61Q8N0U2 210 aa9.74□□□□□ -0.85
DEPDC1B-206ENST00000512452 DEFB125Q8N687 156 aa9.74□□□□□ -0.85
DEPDC1B-206ENST00000512452 OR10AG1Q8NH19 301 aa9.74□□□□□ -0.85
DEPDC1B-206ENST00000512452 PRSS3P2Q8NHM4 247 aa9.74□□□□□ -0.85
DEPDC1B-206ENST00000512452 AP5S1Q9NUS5 200 aa9.74□□□□□ -0.85
DEPDC1B-206ENST00000512452 CMYA5Q8N3K9 4069 aa9.73□□□□□ -0.85
DEPDC1B-206ENST00000512452 HLA-DRB4P13762 266 aa9.73□□□□□ -0.85
DEPDC1B-206ENST00000512452 CMC4P56277 68 aaPredicted RBP9.73□□□□□ -0.85
DEPDC1B-206ENST00000512452 PROK1P58294 105 aa9.73□□□□□ -0.85
DEPDC1B-206ENST00000512452 CDPF1Q6NVV7 123 aa9.73□□□□□ -0.85
DEPDC1B-206ENST00000512452 AMTNQ6UX39 209 aa9.73□□□□□ -0.85
DEPDC1B-206ENST00000512452 TEX43Q6ZNM6 134 aa9.73□□□□□ -0.85
DEPDC1B-206ENST00000512452 FAM19A2Q8N3H0 131 aa9.73□□□□□ -0.85
DEPDC1B-206ENST00000512452 MRAP2Q96G30 205 aa9.73□□□□□ -0.85
DEPDC1B-206ENST00000512452 CITED2Q99967 270 aaPredicted RBP9.73□□□□□ -0.85
DEPDC1B-206ENST00000512452 MSRB1Q9NZV6 116 aa9.73□□□□□ -0.85
DEPDC1B-206ENST00000512452 RNF114Q9Y508 228 aa9.73□□□□□ -0.85
DEPDC1B-206ENST00000512452 HLA-DRB4X5D2U9 266 aa9.73□□□□□ -0.85
DEPDC1B-206ENST00000512452 IGHV1-24A0A0C4DH33 117 aa9.72□□□□□ -0.85
DEPDC1B-206ENST00000512452 MUC21A0A0G2JKD1 596 aa9.72□□□□□ -0.85
DEPDC1B-206ENST00000512452 MUC21A0A140T8X8 626 aa9.72□□□□□ -0.85
DEPDC1B-206ENST00000512452 LINC01546A6NGU7 62 aa9.72□□□□□ -0.85
DEPDC1B-206ENST00000512452 PRSS47A8MTI9 375 aa9.72□□□□□ -0.85
DEPDC1B-206ENST00000512452 J3KRW8 73 aa9.72□□□□□ -0.85
DEPDC1B-206ENST00000512452 C3orf79P0CE67 100 aa9.72□□□□□ -0.85
DEPDC1B-206ENST00000512452 CD33P20138 364 aa9.72□□□□□ -0.85
DEPDC1B-206ENST00000512452 KRTDAPP60985 99 aa9.72□□□□□ -0.85
DEPDC1B-206ENST00000512452 MUC21Q5SSG8 566 aa9.72□□□□□ -0.85
DEPDC1B-206ENST00000512452 Q6ZQT7 251 aa9.72□□□□□ -0.85
DEPDC1B-206ENST00000512452 DUX3Q96PT4 197 aa9.72□□□□□ -0.85
DEPDC1B-206ENST00000512452 MAP1LC3AQ9H492 121 aa9.72□□□□□ -0.85
DEPDC1B-206ENST00000512452 HSPB8Q9UJY1 196 aa9.72□□□□□ -0.85
DEPDC1B-206ENST00000512452 PHLDA3Q9Y5J5 127 aa9.72□□□□□ -0.85
DEPDC1B-206ENST00000512452 SELENOKQ9Y6D0 94 aa9.72□□□□□ -0.85
DEPDC1B-206ENST00000512452 H3BMM0 161 aa9.71□□□□□ -0.86
DEPDC1B-206ENST00000512452 RNASE3P12724 160 aaKnown RBP9.71□□□□□ -0.86
DEPDC1B-206ENST00000512452 DEFB131AP59861 70 aa9.71□□□□□ -0.86
DEPDC1B-206ENST00000512452 OR2K2Q8NGT1 345 aa9.71□□□□□ -0.86
DEPDC1B-206ENST00000512452 NXT2Q9NPJ8 142 aaKnown RBP9.71□□□□□ -0.86
DEPDC1B-206ENST00000512452 TENM3Q9P273 2699 aa9.7□□□□□ -0.86
DEPDC1B-206ENST00000512452 IGHV1OR15-1A0A075B7D0 117 aa9.7□□□□□ -0.86
DEPDC1B-206ENST00000512452 TRAV12-3A0A0B4J271 114 aa9.7□□□□□ -0.86
DEPDC1B-206ENST00000512452 LEPROTL1O95214 131 aa9.7□□□□□ -0.86
DEPDC1B-206ENST00000512452 NPYP01303 97 aa9.7□□□□□ -0.86
DEPDC1B-206ENST00000512452 BTF3P20290 206 aaKnown RBP9.7□□□□□ -0.86
DEPDC1B-206ENST00000512452 SSTP61278 116 aa9.7□□□□□ -0.86
DEPDC1B-206ENST00000512452 KIR3DS1Q14943 382 aa9.7□□□□□ -0.86
DEPDC1B-206ENST00000512452 PMCHL1Q16048 86 aa9.7□□□□□ -0.86
DEPDC1B-206ENST00000512452 CD300EQ496F6 205 aaPredicted RBP9.7□□□□□ -0.86
DEPDC1B-206ENST00000512452 Q8N976 141 aa9.7□□□□□ -0.86
DEPDC1B-206ENST00000512452 AP1S3Q96PC3 154 aa9.7□□□□□ -0.86
DEPDC1B-206ENST00000512452 C20orf144Q9BQM9 153 aa9.7□□□□□ -0.86
DEPDC1B-206ENST00000512452 DPH3P1Q9H4G8 78 aa9.7□□□□□ -0.86
DEPDC1B-206ENST00000512452 MAP6D1Q9H9H5 199 aa9.7□□□□□ -0.86
DEPDC1B-206ENST00000512452 HYDINQ4G0P3 5121 aa9.7□□□□□ -0.86
DEPDC1B-206ENST00000512452 TRGV11A0A075B6L2 103 aa9.69□□□□□ -0.86
DEPDC1B-206ENST00000512452 M0R381 172 aa9.69□□□□□ -0.86
DEPDC1B-206ENST00000512452 CRXO43186 299 aaPredicted RBP9.69□□□□□ -0.86
DEPDC1B-206ENST00000512452 TNFRSF6BO95407 300 aa9.69□□□□□ -0.86
DEPDC1B-206ENST00000512452 PPP1R17O96001 155 aa9.69□□□□□ -0.86
DEPDC1B-206ENST00000512452 EVI2AP22794 236 aa9.69□□□□□ -0.86
DEPDC1B-206ENST00000512452 NDUFA11Q86Y39 141 aa9.69□□□□□ -0.86
DEPDC1B-206ENST00000512452 POM121L12Q8N7R1 296 aa9.69□□□□□ -0.86
DEPDC1B-206ENST00000512452 C9orf85Q96MD7 179 aa9.69□□□□□ -0.86
DEPDC1B-206ENST00000512452 WWC2-AS2Q96NR7 200 aa9.69□□□□□ -0.86
DEPDC1B-206ENST00000512452 LINC00467Q9BRT7 94 aa9.69□□□□□ -0.86
DEPDC1B-206ENST00000512452 TMEM70Q9BUB7 260 aa9.69□□□□□ -0.86
DEPDC1B-206ENST00000512452 ZNF256Q9Y2P7 627 aaPredicted RBP9.69□□□□□ -0.86
DEPDC1B-206ENST00000512452 KIR2DL5BA0A0G2JN68 375 aa9.68□□□□□ -0.86
DEPDC1B-206ENST00000512452 KIR2DL5BA0A0G2JPC4 375 aa9.68□□□□□ -0.86
DEPDC1B-206ENST00000512452 A0A1W2PRX2 142 aa9.68□□□□□ -0.86
DEPDC1B-206ENST00000512452 C20orf202A1L168 122 aa9.68□□□□□ -0.86
DEPDC1B-206ENST00000512452 GNRH2O43555 120 aa9.68□□□□□ -0.86
DEPDC1B-206ENST00000512452 IFI27P40305 119 aaPredicted RBP9.68□□□□□ -0.86
DEPDC1B-206ENST00000512452 SPINK13Q1W4C9 94 aa9.68□□□□□ -0.86
DEPDC1B-206ENST00000512452 KIR2DL5AQ8N109 375 aa9.68□□□□□ -0.86
DEPDC1B-206ENST00000512452 ZNF664Q8N3J9 261 aa9.68□□□□□ -0.86
DEPDC1B-206ENST00000512452 FAM110AQ9BQ89 295 aa9.68□□□□□ -0.86
DEPDC1B-206ENST00000512452 IGHV3-16A0A0C4DH30 117 aa9.67□□□□□ -0.86
DEPDC1B-206ENST00000512452 ADARB2-AS1A8MUL3 147 aa9.67□□□□□ -0.86
DEPDC1B-206ENST00000512452 PRB2P02812 416 aaPredicted RBP9.67□□□□□ -0.86
DEPDC1B-206ENST00000512452 CD7P09564 240 aa9.67□□□□□ -0.86
DEPDC1B-206ENST00000512452 PET117Q6UWS5 81 aa9.67□□□□□ -0.86
DEPDC1B-206ENST00000512452 SPATA12Q7Z6I5 190 aa9.67□□□□□ -0.86
DEPDC1B-206ENST00000512452 Q8N8P6 123 aa9.67□□□□□ -0.86
DEPDC1B-206ENST00000512452 C11orf44Q8N8P7 122 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms