RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 BAALCQ8WXS3 180 aa3.24□□□□□ -1.89
PTPN13-208ENST00000511105 C11orf1Q9H5F2 150 aa3.24□□□□□ -1.89
PTPN13-208ENST00000511105 ZNF586Q9NXT0 402 aa3.24□□□□□ -1.89
PTPN13-208ENST00000511105 YTHDF2Q9Y5A9 579 aaKnown RBP3.24□□□□□ -1.89
PTPN13-208ENST00000511105 TRAV10A0A0B4J240 114 aa3.23□□□□□ -1.89
PTPN13-208ENST00000511105 TRAV12-3A0A0B4J271 114 aa3.23□□□□□ -1.89
PTPN13-208ENST00000511105 M0R3E3 92 aa3.23□□□□□ -1.89
PTPN13-208ENST00000511105 ISLRO14498 428 aa3.23□□□□□ -1.89
PTPN13-208ENST00000511105 HMGB3O15347 200 aaKnown RBP3.23□□□□□ -1.89
PTPN13-208ENST00000511105 MPDU1O75352 247 aa3.23□□□□□ -1.89
PTPN13-208ENST00000511105 OR10J4P0C629 311 aa3.23□□□□□ -1.89
PTPN13-208ENST00000511105 CHTF8P0CG12 524 aa3.23□□□□□ -1.89
PTPN13-208ENST00000511105 PSMB3P49720 205 aa3.23□□□□□ -1.89
PTPN13-208ENST00000511105 FGF8P55075 233 aaPredicted RBP3.23□□□□□ -1.89
PTPN13-208ENST00000511105 KRTAP10-5P60370 271 aa3.23□□□□□ -1.89
PTPN13-208ENST00000511105 IL15RAQ13261 267 aa3.23□□□□□ -1.89
PTPN13-208ENST00000511105 RRN3P1Q2M238 152 aa3.23□□□□□ -1.89
PTPN13-208ENST00000511105 C14orf177Q52M58 125 aa3.23□□□□□ -1.89
PTPN13-208ENST00000511105 C1orf194Q5T5A4 169 aa3.23□□□□□ -1.89
PTPN13-208ENST00000511105 OR8A1Q8NGG7 326 aa3.23□□□□□ -1.89
PTPN13-208ENST00000511105 OR5C1Q8NGR4 320 aa3.23□□□□□ -1.89
PTPN13-208ENST00000511105 S100ZQ8WXG8 99 aa3.23□□□□□ -1.89
PTPN13-208ENST00000511105 RPUSD4Q96CM3 377 aaKnown RBP3.23□□□□□ -1.89
PTPN13-208ENST00000511105 CCDC32Q9BV29 185 aa3.23□□□□□ -1.89
PTPN13-208ENST00000511105 C11orf68Q9H3H3 251 aaKnown RBP3.23□□□□□ -1.89
PTPN13-208ENST00000511105 WFDC1Q9HC57 220 aa3.23□□□□□ -1.89
PTPN13-208ENST00000511105 CACFD1Q9UGQ2 172 aa3.23□□□□□ -1.89
PTPN13-208ENST00000511105 PXMP4Q9Y6I8 212 aa3.23□□□□□ -1.89
PTPN13-208ENST00000511105 VPS13DQ5THJ4 4388 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 A0A0J9YY99 117 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 F5H768 121 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 RLN2P04090 185 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 SPART-AS1P0CW21 52 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 RPL7P18124 248 aaKnown RBP3.22□□□□□ -1.89
PTPN13-208ENST00000511105 PVALBP20472 110 aaPredicted RBP3.22□□□□□ -1.89
PTPN13-208ENST00000511105 RNASE4P34096 147 aaKnown RBP3.22□□□□□ -1.89
PTPN13-208ENST00000511105 SULT1A1P50225 295 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 H2BFSP57053 126 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 TAS2R30P59541 319 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 B2MP61769 119 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 DAD1P61803 113 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 Q5BKY6 102 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 LGALS9CQ6DKI2 356 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 ZNF705AQ6ZN79 300 aaPredicted RBP3.22□□□□□ -1.89
PTPN13-208ENST00000511105 UBE2DNLQ8IWF7 75 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 OR10G9Q8NGN4 311 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 DEDD2Q8WXF8 326 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 HYLS1Q96M11 299 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 IGF2BP2-AS1Q96M15 143 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 GFRA4Q9GZZ7 299 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 NOP10Q9NPE3 64 aaKnown RBP3.22□□□□□ -1.89
PTPN13-208ENST00000511105 ZNF331Q9NQX6 463 aaPredicted RBP3.22□□□□□ -1.89
PTPN13-208ENST00000511105 LYRM2Q9NU23 88 aaPredicted RBP3.22□□□□□ -1.89
PTPN13-208ENST00000511105 SLC39A9Q9NUM3 307 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 UQCC1Q9NVA1 299 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 Q9UF83 564 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 TP53TG3Q9ULZ0 132 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 TIMM9Q9Y5J7 89 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 ALG5Q9Y673 324 aa3.22□□□□□ -1.89
PTPN13-208ENST00000511105 IGKV2-40A0A087WW87 121 aaPredicted RBP3.21□□□□□ -1.9
PTPN13-208ENST00000511105 A0A096LPF7 62 aa3.21□□□□□ -1.9
PTPN13-208ENST00000511105 BCL2L11O43521 198 aa3.21□□□□□ -1.9
PTPN13-208ENST00000511105 CFDP00746 253 aaPredicted RBP3.21□□□□□ -1.9
PTPN13-208ENST00000511105 INSP01308 110 aa3.21□□□□□ -1.9
PTPN13-208ENST00000511105 IGKV2D-40P01614 121 aaPredicted RBP3.21□□□□□ -1.9
PTPN13-208ENST00000511105 IGHV3-53P01767 116 aa3.21□□□□□ -1.9
PTPN13-208ENST00000511105 S100A11P31949 105 aa3.21□□□□□ -1.9
PTPN13-208ENST00000511105 RANP62826 216 aaKnown RBP3.21□□□□□ -1.9
PTPN13-208ENST00000511105 PRR3P79522 188 aaKnown RBP3.21□□□□□ -1.9
PTPN13-208ENST00000511105 BTN1A1Q13410 526 aa3.21□□□□□ -1.9
PTPN13-208ENST00000511105 BPIFA4PQ86YQ2 179 aa3.21□□□□□ -1.9
PTPN13-208ENST00000511105 OR10J6PQ8NGY7 276 aa3.21□□□□□ -1.9
PTPN13-208ENST00000511105 OR2G3Q8NGZ4 309 aa3.21□□□□□ -1.9
PTPN13-208ENST00000511105 PPP1R1CQ8WVI7 109 aa3.21□□□□□ -1.9
PTPN13-208ENST00000511105 SLC25A2Q9BXI2 301 aa3.21□□□□□ -1.9
PTPN13-208ENST00000511105 AGPAT4-IT1Q9H0P7 198 aa3.21□□□□□ -1.9
PTPN13-208ENST00000511105 FRAS1Q86XX4 4008 aa3.21□□□□□ -1.9
PTPN13-208ENST00000511105 PIGBOS1A0A0B4J2F0 54 aa3.2□□□□□ -1.9
PTPN13-208ENST00000511105 A0A0J9YXY3 114 aa3.2□□□□□ -1.9
PTPN13-208ENST00000511105 PLAC8L1A1L4L8 177 aa3.2□□□□□ -1.9
PTPN13-208ENST00000511105 C11orf94C9JXX5 98 aa3.2□□□□□ -1.9
PTPN13-208ENST00000511105 SMLR1H3BR10 107 aa3.2□□□□□ -1.9
PTPN13-208ENST00000511105 MPC2O95563 127 aa3.2□□□□□ -1.9
PTPN13-208ENST00000511105 IGLC2P0DOY2 106 aa3.2□□□□□ -1.9
PTPN13-208ENST00000511105 RPL12P30050 165 aaKnown RBP3.2□□□□□ -1.9
PTPN13-208ENST00000511105 FUSP35637 526 aaKnown RBP eCLIP3.2□□□□□ -1.9
PTPN13-208ENST00000511105 RAB31Q13636 194 aa3.2□□□□□ -1.9
PTPN13-208ENST00000511105 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
PTPN13-208ENST00000511105 PRR9Q5T870 116 aa3.2□□□□□ -1.9
PTPN13-208ENST00000511105 STX12Q86Y82 276 aa3.2□□□□□ -1.9
PTPN13-208ENST00000511105 TYMSOSQ8TAI1 123 aa3.2□□□□□ -1.9
PTPN13-208ENST00000511105 LINC00477Q96M19 166 aa3.2□□□□□ -1.9
PTPN13-208ENST00000511105 GPR82Q96P67 336 aa3.2□□□□□ -1.9
PTPN13-208ENST00000511105 NPCDR1Q9BY65 106 aa3.2□□□□□ -1.9
PTPN13-208ENST00000511105 SLC25A31Q9H0C2 315 aa3.2□□□□□ -1.9
PTPN13-208ENST00000511105 KLF12Q9Y4X4 402 aa3.2□□□□□ -1.9
PTPN13-208ENST00000511105 DNAH2Q9P225 4427 aa3.2□□□□□ -1.9
PTPN13-208ENST00000511105 HERC2O95714 4834 aa3.2□□□□□ -1.9
PTPN13-208ENST00000511105 DNAH17Q9UFH2 4485 aa3.19□□□□□ -1.9
PTPN13-208ENST00000511105 HECTD4Q9Y4D8 3996 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms