RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 A8MWL6 223 aa10.56□□□□□ -0.72
RNF4-213ENST00000509388 GZMBP10144 247 aa10.56□□□□□ -0.72
RNF4-213ENST00000509388 HTN3P15516 51 aa10.56□□□□□ -0.72
RNF4-213ENST00000509388 OR10G8Q8NGN5 311 aa10.56□□□□□ -0.72
RNF4-213ENST00000509388 RASL10AQ92737 203 aa10.56□□□□□ -0.72
RNF4-213ENST00000509388 SFRP2Q96HF1 295 aa10.56□□□□□ -0.72
RNF4-213ENST00000509388 A0A1W2PPQ1 181 aa10.55□□□□□ -0.72
RNF4-213ENST00000509388 ATP5G1P05496 136 aa10.55□□□□□ -0.72
RNF4-213ENST00000509388 MED14OSP0DP75 135 aa10.55□□□□□ -0.72
RNF4-213ENST00000509388 FER1L6-AS1Q8NA97 138 aa10.55□□□□□ -0.72
RNF4-213ENST00000509388 MUC7Q8TAX7 377 aa10.55□□□□□ -0.72
RNF4-213ENST00000509388 SEC11CQ9BY50 192 aa10.55□□□□□ -0.72
RNF4-213ENST00000509388 TRAV10A0A0B4J240 114 aa10.54□□□□□ -0.72
RNF4-213ENST00000509388 M0R381 172 aa10.54□□□□□ -0.72
RNF4-213ENST00000509388 SSTP61278 116 aa10.54□□□□□ -0.72
RNF4-213ENST00000509388 CT83Q5H943 113 aa10.54□□□□□ -0.72
RNF4-213ENST00000509388 SPANXN1Q5VSR9 72 aa10.54□□□□□ -0.72
RNF4-213ENST00000509388 ZFP82Q8N141 532 aa10.54□□□□□ -0.72
RNF4-213ENST00000509388 LINC00612Q8N6U2 182 aa10.54□□□□□ -0.72
RNF4-213ENST00000509388 PHLDA1Q8WV24 401 aaPredicted RBP10.54□□□□□ -0.72
RNF4-213ENST00000509388 DEFB131BA0A096LNP1 70 aa10.53□□□□□ -0.72
RNF4-213ENST00000509388 F2Z2F3 143 aa10.53□□□□□ -0.72
RNF4-213ENST00000509388 F5H768 121 aa10.53□□□□□ -0.72
RNF4-213ENST00000509388 OR5AL1P0C617 328 aa10.53□□□□□ -0.72
RNF4-213ENST00000509388 NDUFA5Q16718 116 aa10.53□□□□□ -0.72
RNF4-213ENST00000509388 ZNF575Q86XF7 245 aa10.53□□□□□ -0.72
RNF4-213ENST00000509388 OR4C5Q8NGB2 326 aa10.53□□□□□ -0.72
RNF4-213ENST00000509388 PTH2Q96A98 100 aa10.53□□□□□ -0.72
RNF4-213ENST00000509388 NDUFAF3Q9BU61 184 aa10.53□□□□□ -0.72
RNF4-213ENST00000509388 SCRT2Q9NQ03 307 aa10.53□□□□□ -0.72
RNF4-213ENST00000509388 COL7A1Q02388 2944 aa10.53□□□□□ -0.72
RNF4-213ENST00000509388 TGP01266 2768 aa10.52□□□□□ -0.73
RNF4-213ENST00000509388 NUPR2A6NF83 97 aa10.52□□□□□ -0.73
RNF4-213ENST00000509388 PPP1R2P9O14990 202 aa10.52□□□□□ -0.73
RNF4-213ENST00000509388 SNAI2O43623 268 aa10.52□□□□□ -0.73
RNF4-213ENST00000509388 IGHV3-53P01767 116 aa10.52□□□□□ -0.73
RNF4-213ENST00000509388 MT-ND4LP03901 98 aa10.52□□□□□ -0.73
RNF4-213ENST00000509388 ADCYAP1P18509 176 aa10.52□□□□□ -0.73
RNF4-213ENST00000509388 CACNG7P62955 275 aa10.52□□□□□ -0.73
RNF4-213ENST00000509388 ZFAND6Q6FIF0 208 aa10.52□□□□□ -0.73
RNF4-213ENST00000509388 TSKUQ8WUA8 353 aa10.52□□□□□ -0.73
RNF4-213ENST00000509388 BORCS7Q96B45 105 aa10.52□□□□□ -0.73
RNF4-213ENST00000509388 C18orf15Q96N68 181 aa10.52□□□□□ -0.73
RNF4-213ENST00000509388 SSBP4Q9BWG4 385 aaPredicted RBP10.52□□□□□ -0.73
RNF4-213ENST00000509388 STAB2Q8WWQ8 2551 aa10.51□□□□□ -0.73
RNF4-213ENST00000509388 MUC21A0A0G2JKD1 596 aa10.51□□□□□ -0.73
RNF4-213ENST00000509388 MUC21A0A140T8X8 626 aa10.51□□□□□ -0.73
RNF4-213ENST00000509388 A8MWV9 139 aa10.51□□□□□ -0.73
RNF4-213ENST00000509388 IGLC6P0CF74 106 aa10.51□□□□□ -0.73
RNF4-213ENST00000509388 PIK3CD-AS1Q5SR53 167 aa10.51□□□□□ -0.73
RNF4-213ENST00000509388 DMRTA1Q5VZB9 504 aa10.51□□□□□ -0.73
RNF4-213ENST00000509388 LYZL1Q6UWQ5 148 aa10.51□□□□□ -0.73
RNF4-213ENST00000509388 OR10AG1Q8NH19 301 aa10.51□□□□□ -0.73
RNF4-213ENST00000509388 KLK5Q9Y337 293 aaPredicted RBP10.51□□□□□ -0.73
RNF4-213ENST00000509388 V9GYV3 84 aa10.51□□□□□ -0.73
RNF4-213ENST00000509388 TRAV4A0A0B4J268 109 aa10.5□□□□□ -0.73
RNF4-213ENST00000509388 C3orf84H3BNL1 204 aa10.5□□□□□ -0.73
RNF4-213ENST00000509388 CEMP1Q6PRD7 247 aaPredicted RBP10.5□□□□□ -0.73
RNF4-213ENST00000509388 SLC7A5P1Q8MH63 180 aa10.5□□□□□ -0.73
RNF4-213ENST00000509388 ANAPC16Q96DE5 110 aa10.5□□□□□ -0.73
RNF4-213ENST00000509388 GFRA4Q9GZZ7 299 aa10.5□□□□□ -0.73
RNF4-213ENST00000509388 TRGV4A0A0C4DH28 118 aa10.49□□□□□ -0.73
RNF4-213ENST00000509388 FAM231BA6NCW3 169 aa10.49□□□□□ -0.73
RNF4-213ENST00000509388 CIDEAO60543 219 aa10.49□□□□□ -0.73
RNF4-213ENST00000509388 RNF212Q495C1 297 aa10.49□□□□□ -0.73
RNF4-213ENST00000509388 GTSF1Q8WW33 167 aa10.49□□□□□ -0.73
RNF4-213ENST00000509388 PGLYRP4Q96LB8 373 aa10.49□□□□□ -0.73
RNF4-213ENST00000509388 HIGD1CA8MV81 97 aa10.48□□□□□ -0.73
RNF4-213ENST00000509388 IGLL5B9A064 214 aa10.48□□□□□ -0.73
RNF4-213ENST00000509388 RS1O15537 224 aa10.48□□□□□ -0.73
RNF4-213ENST00000509388 APOC3P02656 99 aa10.48□□□□□ -0.73
RNF4-213ENST00000509388 SMIM17P0DL12 118 aa10.48□□□□□ -0.73
RNF4-213ENST00000509388 SLAQ13239 276 aa10.48□□□□□ -0.73
RNF4-213ENST00000509388 TWIST1Q15672 202 aa10.48□□□□□ -0.73
RNF4-213ENST00000509388 C10orf91Q5T1B1 145 aa10.48□□□□□ -0.73
RNF4-213ENST00000509388 CFAP126Q5VTH2 177 aa10.48□□□□□ -0.73
RNF4-213ENST00000509388 ZNF479Q96JC4 524 aa10.48□□□□□ -0.73
RNF4-213ENST00000509388 NAT8BQ9UHF3 227 aa10.48□□□□□ -0.73
RNF4-213ENST00000509388 CARHSP1Q9Y2V2 147 aaKnown RBP10.48□□□□□ -0.73
RNF4-213ENST00000509388 IGHV3-73A0A0B4J1V6 119 aa10.47□□□□□ -0.73
RNF4-213ENST00000509388 CTRLP40313 264 aa10.47□□□□□ -0.73
RNF4-213ENST00000509388 FOXA3P55318 350 aaPredicted RBP10.47□□□□□ -0.73
RNF4-213ENST00000509388 FAM74A4Q5TZK3 123 aa10.47□□□□□ -0.73
RNF4-213ENST00000509388 WDR73Q6P4I2 378 aa10.47□□□□□ -0.73
RNF4-213ENST00000509388 RHODO00212 210 aa10.46□□□□□ -0.73
RNF4-213ENST00000509388 NXPH4O95158 308 aa10.46□□□□□ -0.73
RNF4-213ENST00000509388 TRGC1P0CF51 173 aa10.46□□□□□ -0.73
RNF4-213ENST00000509388 HOXA5P20719 270 aa10.46□□□□□ -0.73
RNF4-213ENST00000509388 NTF3P20783 257 aa10.46□□□□□ -0.73
RNF4-213ENST00000509388 SMIM15Q7Z3B0 74 aa10.46□□□□□ -0.73
RNF4-213ENST00000509388 POM121L12Q8N7R1 296 aa10.46□□□□□ -0.73
RNF4-213ENST00000509388 FAM210BQ96KR6 192 aa10.46□□□□□ -0.73
RNF4-213ENST00000509388 AP1S3Q96PC3 154 aa10.46□□□□□ -0.73
RNF4-213ENST00000509388 JPT2Q9H910 190 aa10.46□□□□□ -0.73
RNF4-213ENST00000509388 HHLA3Q9XRX5 114 aa10.46□□□□□ -0.73
RNF4-213ENST00000509388 IGHV4-4A0A075B6R2 117 aa10.45□□□□□ -0.74
RNF4-213ENST00000509388 A0A087WWL8 130 aa10.45□□□□□ -0.74
RNF4-213ENST00000509388 FHL2Q14192 279 aa10.45□□□□□ -0.74
RNF4-213ENST00000509388 TMEM88Q6PEY1 159 aa10.45□□□□□ -0.74
RNF4-213ENST00000509388 ZFP2Q6ZN57 461 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms