RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 SPG11Q96JI7 2443 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 TRBV24-1A0A075B6N3 115 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 C3orf85A0A1B0GTC6 90 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 DPRXA6NFQ7 191 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 COLCA2A8K830 154 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 A8MU10 97 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 M0R2P5 195 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 SSSCA1O60232 199 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 PMP2P02689 132 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 C1QAP02745 245 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 PYYP10082 97 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 FABP4P15090 132 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 SRP14P37108 136 aaKnown RBP1.4□□□□□ -2.19
PDE4D-218ENST00000509368 ATP5EP56381 51 aaPredicted RBP1.4□□□□□ -2.19
PDE4D-218ENST00000509368 LINC00313P59037 77 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 NDPQ00604 133 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 ZNF141Q15928 474 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 C12orf73Q69YU5 71 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 LAIR2Q6ISS4 152 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 DEFB106AQ8N104 65 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 OR10P1Q8NGE3 313 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 OR2T27Q8NH04 317 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 CCL4L1Q8NHW4 92 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 SLC25A40Q8TBP6 338 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 MAL2Q969L2 176 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 DOCK9Q9BZ29 2069 aa1.4□□□□□ -2.19
PDE4D-218ENST00000509368 ZNF469Q96JG9 3925 aaPredicted RBP1.4□□□□□ -2.19
PDE4D-218ENST00000509368 PRRC2CQ9Y520 2896 aaKnown RBP1.4□□□□□ -2.19
PDE4D-218ENST00000509368 NUP214P35658 2090 aaPredicted RBP1.39□□□□□ -2.19
PDE4D-218ENST00000509368 IGLV4-60A0A075B6I1 120 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 TRAV27A0A087WT01 109 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 A0A087X0T9 212 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 TRBV27A0A0K0K1C4 114 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 C7orf71A4D174 169 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 F8W1H4 67 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 PROSCO94903 275 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 IFI6P09912 130 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 HLA-DRB4P13762 266 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 FKBP2P26885 142 aaKnown RBP1.39□□□□□ -2.19
PDE4D-218ENST00000509368 TFF3Q07654 80 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 TMEM244Q5VVB8 128 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 C16orf47Q6ZP98 133 aaPredicted RBP1.39□□□□□ -2.19
PDE4D-218ENST00000509368 ATP5L2Q7Z4Y8 100 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 TEN1Q86WV5 123 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 Q8N9L7 120 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 C15orf53Q8NAA6 179 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 LINC00301Q8NCQ3 95 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 MYOZ3Q8TDC0 251 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 ZNF721Q8TF20 911 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 DPH3Q96FX2 82 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 LINC00052Q96N35 136 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 IMMP2LQ96T52 175 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 ADAT1Q9BUB4 502 aaKnown RBP1.39□□□□□ -2.19
PDE4D-218ENST00000509368 OTORQ9NRC9 128 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 CBLN4Q9NTU7 201 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 HLA-DRB4X5D2U9 266 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 UNC13CQ8NB66 2214 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 NSD1Q96L73 2696 aaPredicted RBP1.39□□□□□ -2.19
PDE4D-218ENST00000509368 FBN1P35555 2871 aaKnown RBP1.39□□□□□ -2.19
PDE4D-218ENST00000509368 NCOA6Q14686 2063 aaPredicted RBP1.39□□□□□ -2.19
PDE4D-218ENST00000509368 TRBV20OR9-2A0A075B6H5 130 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 IGLV3-12A0A075B6K2 115 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 TRBV20-1A0A075B6N2 111 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 TRAV40A0A0B4J280 105 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 GRIFINA4D1Z8 144 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 ZNF727A8MUV8 499 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 M0R381 172 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 PITX3O75364 302 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 SPINK8P0C7L1 97 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 GZMBP10144 247 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 ZNF14P17017 642 aaPredicted RBP1.39□□□□□ -2.19
PDE4D-218ENST00000509368 S100A10P60903 97 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 GNGT1P63211 74 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 ZNF90Q03938 601 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 AKR1C1Q04828 323 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 Q6AWC8 147 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 IZUMO2Q6UXV1 221 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 SCXQ7RTU7 201 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 AAED1Q7RTV5 226 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 LINC00305Q7Z4B0 112 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 ZFAND2AQ8N6M9 145 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 ZNF709Q8N972 641 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 OR2T10Q8NGZ9 312 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 RAB2BQ8WUD1 216 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 C10orf82Q8WW14 230 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 RBMXL1Q96E39 390 aaKnown RBP1.39□□□□□ -2.19
PDE4D-218ENST00000509368 VAMP8Q9BV40 100 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 ATG5Q9H1Y0 275 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 TMEM106BQ9NUM4 274 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 UQCR10Q9UDW1 63 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 MARCOQ9UEW3 520 aaPredicted RBP1.39□□□□□ -2.19
PDE4D-218ENST00000509368 ZNF443Q9Y2A4 671 aaPredicted RBP1.39□□□□□ -2.19
PDE4D-218ENST00000509368 SERP1Q9Y6X1 66 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 OBSCNQ5VST9 7968 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 CCDC168Q8NDH2 2452 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 ANKRD36A6QL64 1941 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 RP1L1Q8IWN7 2480 aaPredicted RBP1.39□□□□□ -2.19
PDE4D-218ENST00000509368 TRGV5A0A0B4J1U4 118 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 TRAV13-1A0A0B4J241 112 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 TRAV17A0A0B4J275 112 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms