RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 TSSC4Q9Y5U2 329 aaPredicted RBP6.89□□□□□ -1.31
HTT-205ENST00000509043 HLA-DRB4X5D2U9 266 aa6.89□□□□□ -1.31
HTT-205ENST00000509043 VPS13CQ709C8 3753 aa6.89□□□□□ -1.31
HTT-205ENST00000509043 ABCA12Q86UK0 2595 aa6.88□□□□□ -1.31
HTT-205ENST00000509043 IGLV2-18A0A075B6J9 118 aa6.88□□□□□ -1.31
HTT-205ENST00000509043 IGHV1OR15-1A0A075B7D0 117 aa6.88□□□□□ -1.31
HTT-205ENST00000509043 J3KRW8 73 aa6.88□□□□□ -1.31
HTT-205ENST00000509043 HILS1P60008 231 aa6.88□□□□□ -1.31
HTT-205ENST00000509043 LAGE3Q14657 143 aa6.88□□□□□ -1.31
HTT-205ENST00000509043 KIR3DS1Q14943 382 aa6.88□□□□□ -1.31
HTT-205ENST00000509043 KHDC1LQ5JSQ8 128 aa6.88□□□□□ -1.31
HTT-205ENST00000509043 AMTNQ6UX39 209 aa6.88□□□□□ -1.31
HTT-205ENST00000509043 ADAMTSL5Q6ZMM2 481 aa6.88□□□□□ -1.31
HTT-205ENST00000509043 PMCHL2Q9BQD1 86 aa6.88□□□□□ -1.31
HTT-205ENST00000509043 LINC00467Q9BRT7 94 aa6.88□□□□□ -1.31
HTT-205ENST00000509043 TRAV12-3A0A0B4J271 114 aa6.87□□□□□ -1.31
HTT-205ENST00000509043 IGHV3-16A0A0C4DH30 117 aa6.87□□□□□ -1.31
HTT-205ENST00000509043 GNRH2O43555 120 aa6.87□□□□□ -1.31
HTT-205ENST00000509043 CD7P09564 240 aa6.87□□□□□ -1.31
HTT-205ENST00000509043 IGLL1P15814 213 aa6.87□□□□□ -1.31
HTT-205ENST00000509043 HNRNPA3P51991 378 aaKnown RBP6.87□□□□□ -1.31
HTT-205ENST00000509043 DEFB1P60022 68 aa6.87□□□□□ -1.31
HTT-205ENST00000509043 SUMO2P61956 95 aaKnown RBP6.87□□□□□ -1.31
HTT-205ENST00000509043 DEFB114Q30KQ6 69 aa6.87□□□□□ -1.31
HTT-205ENST00000509043 Q6ZQT7 251 aa6.87□□□□□ -1.31
HTT-205ENST00000509043 LINC00173Q6ZV60 143 aa6.87□□□□□ -1.31
HTT-205ENST00000509043 DLX4Q92988 240 aaPredicted RBP6.87□□□□□ -1.31
HTT-205ENST00000509043 PTH2Q96A98 100 aa6.87□□□□□ -1.31
HTT-205ENST00000509043 SMIM2Q9BVW6 85 aa6.87□□□□□ -1.31
HTT-205ENST00000509043 ESM1Q9NQ30 184 aa6.87□□□□□ -1.31
HTT-205ENST00000509043 TIMM8BQ9Y5J9 83 aaPredicted RBP6.87□□□□□ -1.31
HTT-205ENST00000509043 H3BMM0 161 aa6.86□□□□□ -1.31
HTT-205ENST00000509043 CCL24O00175 119 aa6.86□□□□□ -1.31
HTT-205ENST00000509043 TCAPO15273 167 aa6.86□□□□□ -1.31
HTT-205ENST00000509043 DEFB136Q30KP8 78 aa6.86□□□□□ -1.31
HTT-205ENST00000509043 Q6ZN92 141 aa6.86□□□□□ -1.31
HTT-205ENST00000509043 TMEM61Q8N0U2 210 aa6.86□□□□□ -1.31
HTT-205ENST00000509043 ATOH7Q8N100 152 aa6.86□□□□□ -1.31
HTT-205ENST00000509043 RAX2Q96IS3 184 aa6.86□□□□□ -1.31
HTT-205ENST00000509043 GOLT1BQ9Y3E0 138 aa6.86□□□□□ -1.31
HTT-205ENST00000509043 KIF25-AS1Q9Y6Z4 181 aa6.86□□□□□ -1.31
HTT-205ENST00000509043 CHD6Q8TD26 2715 aa6.85□□□□□ -1.31
HTT-205ENST00000509043 MAP1AP78559 2803 aaPredicted RBP6.85□□□□□ -1.31
HTT-205ENST00000509043 TENM4Q6N022 2769 aa6.85□□□□□ -1.31
HTT-205ENST00000509043 TRBV6-5A0A0K0K1A5 114 aa6.85□□□□□ -1.31
HTT-205ENST00000509043 DEFB131AP59861 70 aa6.85□□□□□ -1.31
HTT-205ENST00000509043 SPINK13Q1W4C9 94 aa6.85□□□□□ -1.31
HTT-205ENST00000509043 HIST2H2BCQ6DN03 193 aa6.85□□□□□ -1.31
HTT-205ENST00000509043 SLC25A34Q6PIV7 304 aa6.85□□□□□ -1.31
HTT-205ENST00000509043 C18orf65Q6ZTR6 163 aa6.85□□□□□ -1.31
HTT-205ENST00000509043 C14orf178Q8N769 122 aaPredicted RBP6.85□□□□□ -1.31
HTT-205ENST00000509043 LINC01006Q8NI28 216 aa6.85□□□□□ -1.31
HTT-205ENST00000509043 RASL10AQ92737 203 aa6.85□□□□□ -1.31
HTT-205ENST00000509043 FAM110AQ9BQ89 295 aa6.85□□□□□ -1.31
HTT-205ENST00000509043 SNHG12Q9BXW3 62 aa6.85□□□□□ -1.31
HTT-205ENST00000509043 ITPR3Q14573 2671 aa6.84□□□□□ -1.31
HTT-205ENST00000509043 SVEP1Q4LDE5 3571 aa6.84□□□□□ -1.31
HTT-205ENST00000509043 MGPP08493 103 aa6.84□□□□□ -1.31
HTT-205ENST00000509043 GATA1P15976 413 aaPredicted RBP6.84□□□□□ -1.31
HTT-205ENST00000509043 LINC00315P59091 139 aa6.84□□□□□ -1.31
HTT-205ENST00000509043 Q8N1Y9 231 aa6.84□□□□□ -1.31
HTT-205ENST00000509043 TMEM158Q8WZ71 300 aa6.84□□□□□ -1.31
HTT-205ENST00000509043 MAP6D1Q9H9H5 199 aa6.84□□□□□ -1.31
HTT-205ENST00000509043 EDA2RQ9HAV5 297 aa6.84□□□□□ -1.31
HTT-205ENST00000509043 ZNF256Q9Y2P7 627 aaPredicted RBP6.84□□□□□ -1.31
HTT-205ENST00000509043 ZANQ9Y493 2812 aa6.84□□□□□ -1.31
HTT-205ENST00000509043 MXRA5Q9NR99 2828 aa6.83□□□□□ -1.32
HTT-205ENST00000509043 CELSR1Q9NYQ6 3014 aa6.83□□□□□ -1.32
HTT-205ENST00000509043 TEX15Q9BXT5 2789 aa6.83□□□□□ -1.32
HTT-205ENST00000509043 TRAV12-1A0A0B4J245 112 aa6.83□□□□□ -1.32
HTT-205ENST00000509043 TRAV26-2A0A0B4J265 109 aa6.83□□□□□ -1.32
HTT-205ENST00000509043 H7C1H1 209 aa6.83□□□□□ -1.32
HTT-205ENST00000509043 VCYO14598 125 aa6.83□□□□□ -1.32
HTT-205ENST00000509043 DLEU1O43261 78 aa6.83□□□□□ -1.32
HTT-205ENST00000509043 GAS8-AS1O95177 125 aa6.83□□□□□ -1.32
HTT-205ENST00000509043 NUDT3O95989 172 aa6.83□□□□□ -1.32
HTT-205ENST00000509043 CD28P10747 220 aa6.83□□□□□ -1.32
HTT-205ENST00000509043 CD300EQ496F6 205 aaPredicted RBP6.83□□□□□ -1.32
HTT-205ENST00000509043 COL5A1-AS1Q5SY13 56 aa6.83□□□□□ -1.32
HTT-205ENST00000509043 ZMAT4Q9H898 229 aa6.83□□□□□ -1.32
HTT-205ENST00000509043 CSMD1Q96PZ7 3565 aa6.82□□□□□ -1.32
HTT-205ENST00000509043 TRAV12-2A0A075B6T6 113 aa6.82□□□□□ -1.32
HTT-205ENST00000509043 CBY3A6NI87 242 aa6.82□□□□□ -1.32
HTT-205ENST00000509043 H0Y8G0 127 aa6.82□□□□□ -1.32
HTT-205ENST00000509043 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.82□□□□□ -1.32
HTT-205ENST00000509043 EREGO14944 169 aa6.82□□□□□ -1.32
HTT-205ENST00000509043 INSP01308 110 aa6.82□□□□□ -1.32
HTT-205ENST00000509043 IGKV3-20P01619 116 aa6.82□□□□□ -1.32
HTT-205ENST00000509043 PRSS1P07477 247 aa6.82□□□□□ -1.32
HTT-205ENST00000509043 COX8AP10176 69 aa6.82□□□□□ -1.32
HTT-205ENST00000509043 NUTF2P61970 127 aaKnown RBP6.82□□□□□ -1.32
HTT-205ENST00000509043 ZNF415Q09FC8 603 aa6.82□□□□□ -1.32
HTT-205ENST00000509043 MAJINQ3KP22 176 aa6.82□□□□□ -1.32
HTT-205ENST00000509043 TOMM6Q96B49 74 aa6.82□□□□□ -1.32
HTT-205ENST00000509043 KIR2DL4Q99706 377 aa6.82□□□□□ -1.32
HTT-205ENST00000509043 CITED2Q99967 270 aaPredicted RBP6.82□□□□□ -1.32
HTT-205ENST00000509043 SPXQ9BT56 116 aa6.82□□□□□ -1.32
HTT-205ENST00000509043 SELENOKQ9Y6D0 94 aa6.82□□□□□ -1.32
HTT-205ENST00000509043 PDZD2O15018 2839 aa6.82□□□□□ -1.32
HTT-205ENST00000509043 DOPEY2Q9Y3R5 2298 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms