RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 SUPT4H1P63272 117 aaKnown RBP2.93□□□□□ -1.94
NEDD4-209ENST00000508871 MIAQ16674 131 aa2.93□□□□□ -1.94
NEDD4-209ENST00000508871 LINC00052Q96N35 136 aa2.93□□□□□ -1.94
NEDD4-209ENST00000508871 IGKV2D-30A0A075B6S6 120 aa2.93□□□□□ -1.94
NEDD4-209ENST00000508871 C9JCJ5 164 aa2.93□□□□□ -1.94
NEDD4-209ENST00000508871 K7ENP7 123 aa2.93□□□□□ -1.94
NEDD4-209ENST00000508871 SSSCA1O60232 199 aa2.93□□□□□ -1.94
NEDD4-209ENST00000508871 TSPEAR-AS2P59090 65 aa2.93□□□□□ -1.94
NEDD4-209ENST00000508871 C11orf87Q6NUJ2 197 aa2.93□□□□□ -1.94
NEDD4-209ENST00000508871 CHCHD7Q9BUK0 85 aa2.93□□□□□ -1.94
NEDD4-209ENST00000508871 IGKV3-15P01624 115 aa2.93□□□□□ -1.94
NEDD4-209ENST00000508871 CYP2G1PQ6ZSU1 146 aa2.93□□□□□ -1.94
NEDD4-209ENST00000508871 C11orf52Q96A22 123 aa2.93□□□□□ -1.94
NEDD4-209ENST00000508871 LINC00467Q9BRT7 94 aa2.93□□□□□ -1.94
NEDD4-209ENST00000508871 SLC50A1Q9BRV3 221 aa2.93□□□□□ -1.94
NEDD4-209ENST00000508871 DYNLRB1Q9NP97 96 aa2.93□□□□□ -1.94
NEDD4-209ENST00000508871 FGF12P61328 243 aa2.93□□□□□ -1.94
NEDD4-209ENST00000508871 VGLL1Q99990 258 aa2.93□□□□□ -1.94
NEDD4-209ENST00000508871 AGPAT4-IT1Q9H0P7 198 aa2.93□□□□□ -1.94
NEDD4-209ENST00000508871 MDFIC2A0A1B0GVS7 189 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 IGLV7-43P04211 117 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 P0DMU3 169 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 FAM231AP0DMU4 169 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 FAM231CP0DMU5 169 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 PLA2G2AP14555 144 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 ZFP2Q6ZN57 461 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 PCNX3Q9H6A9 2034 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 IGKV1-9A0A0C4DH69 117 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 CRYGAP11844 174 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 ELOBQ15370 118 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 PYY3Q5JQD4 70 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 SPATA12Q7Z6I5 190 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 NMES1Q9C002 83 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 IGHV1-3A0A0C4DH29 117 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 BUB1B-PAK6H3BSN5 160 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 RPL28P46779 137 aaKnown RBP2.92□□□□□ -1.94
NEDD4-209ENST00000508871 MUC21A0A0G2JKD1 596 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 IGHV3-13P01766 116 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 RPS27P42677 84 aaKnown RBP2.92□□□□□ -1.94
NEDD4-209ENST00000508871 CRIP2P52943 208 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-209ENST00000508871 TRAV13-2A0A0B4J235 113 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 IGKV2-30P06310 120 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 CTRLP40313 264 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 LINC00303Q3SY05 128 aa2.92□□□□□ -1.94
NEDD4-209ENST00000508871 MPDZO75970 2070 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 IGKV1-27A0A075B6S5 117 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 FSTL3O95633 263 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 IGHG2P01859 326 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 GNB2P62879 340 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 SND1-IT1Q9HBX3 110 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 GOLGA4Q13439 2230 aaKnown RBP2.91□□□□□ -1.94
NEDD4-209ENST00000508871 MYO7AQ13402 2215 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 K7EP34 96 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 HSPB1P04792 205 aaKnown RBP2.91□□□□□ -1.94
NEDD4-209ENST00000508871 GPHB5Q86YW7 130 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 CSNK1G2-AS1Q8NCQ2 148 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 CA10Q9NS85 328 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 CENPFP49454 3210 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 PITX3O75364 302 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 SFT2D2O95562 160 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 LINC00242Q5T6M2 205 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 C1orf158Q8N1D5 194 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 C9orf106Q8NAJ2 232 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 LINC00476Q8WZB0 136 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 LINC00479Q96M42 142 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 ZNF71Q9NQZ8 489 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-209ENST00000508871 LINC00205P59089 165 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 SPATA3Q8NHX4 192 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 MRPL35Q9NZE8 188 aaKnown RBP2.91□□□□□ -1.94
NEDD4-209ENST00000508871 CHD7Q9P2D1 2997 aa2.91□□□□□ -1.94
NEDD4-209ENST00000508871 IGLV1-50A0A075B6I6 118 aa2.9□□□□□ -1.94
NEDD4-209ENST00000508871 H7C423 109 aa2.9□□□□□ -1.94
NEDD4-209ENST00000508871 CRISP2P16562 243 aa2.9□□□□□ -1.94
NEDD4-209ENST00000508871 PRR3P79522 188 aaKnown RBP2.9□□□□□ -1.94
NEDD4-209ENST00000508871 ETDBQ3ZM63 59 aa2.9□□□□□ -1.94
NEDD4-209ENST00000508871 MRPL51Q4U2R6 128 aaKnown RBP2.9□□□□□ -1.94
NEDD4-209ENST00000508871 C15orf53Q8NAA6 179 aa2.9□□□□□ -1.94
NEDD4-209ENST00000508871 ATP6V0E2Q8NHE4 81 aa2.9□□□□□ -1.94
NEDD4-209ENST00000508871 HIGD2AQ9BW72 106 aa2.9□□□□□ -1.94
NEDD4-209ENST00000508871 CACFD1Q9UGQ2 172 aa2.9□□□□□ -1.94
NEDD4-209ENST00000508871 IGKCP01834 107 aa2.9□□□□□ -1.94
NEDD4-209ENST00000508871 COX6CP09669 75 aa2.9□□□□□ -1.94
NEDD4-209ENST00000508871 ZNF56Q15929 161 aa2.9□□□□□ -1.94
NEDD4-209ENST00000508871 Q6ZRP5 223 aa2.9□□□□□ -1.94
NEDD4-209ENST00000508871 Q6ZSN1 163 aa2.9□□□□□ -1.94
NEDD4-209ENST00000508871 PPP1R1CQ8WVI7 109 aa2.9□□□□□ -1.94
NEDD4-209ENST00000508871 MRPS16Q9Y3D3 137 aaKnown RBP2.9□□□□□ -1.94
NEDD4-209ENST00000508871 U3KQK5 164 aa2.9□□□□□ -1.94
NEDD4-209ENST00000508871 CACNA1EQ15878 2313 aa2.9□□□□□ -1.94
NEDD4-209ENST00000508871 SPTBN5Q9NRC6 3674 aaKnown RBP2.9□□□□□ -1.95
NEDD4-209ENST00000508871 IGHV1-8P0DP01 117 aa2.9□□□□□ -1.95
NEDD4-209ENST00000508871 FAM74A4Q5TZK3 123 aa2.9□□□□□ -1.95
NEDD4-209ENST00000508871 RPP25LQ8N5L8 163 aaKnown RBP2.9□□□□□ -1.95
NEDD4-209ENST00000508871 ARHGAP5-AS1Q96IT6 56 aa2.9□□□□□ -1.95
NEDD4-209ENST00000508871 MED9Q9NWA0 146 aa2.9□□□□□ -1.95
NEDD4-209ENST00000508871 TMEM30CPA0ZSE6 113 aa2.9□□□□□ -1.95
NEDD4-209ENST00000508871 C11orf86A6NJI1 115 aa2.9□□□□□ -1.95
NEDD4-209ENST00000508871 IGLV2-11P01706 119 aa2.9□□□□□ -1.95
NEDD4-209ENST00000508871 SLC25A26Q70HW3 274 aa2.9□□□□□ -1.95
NEDD4-209ENST00000508871 ZNF664Q8N3J9 261 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms