RNA–Protein interactions for RNA: ENST00000508625.1

PDS5A-208, Transcript of PDS5 cohesin associated factor A, humanhuman

TSL 3

Gene PDS5A, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-208ENST00000508625 C8orf76Q96K31 380 aa-0.72□□□□□ -2.52
PDS5A-208ENST00000508625 SIKE1Q9BRV8 207 aa-0.72□□□□□ -2.52
PDS5A-208ENST00000508625 LXNQ9BS40 222 aa-0.72□□□□□ -2.52
PDS5A-208ENST00000508625 OR2J1Q9GZK6 312 aa-0.72□□□□□ -2.52
PDS5A-208ENST00000508625 AGPAT3Q9NRZ7 376 aa-0.72□□□□□ -2.52
PDS5A-208ENST00000508625 UQCC1Q9NVA1 299 aa-0.72□□□□□ -2.52
PDS5A-208ENST00000508625 LAMTOR3Q9UHA4 124 aa-0.72□□□□□ -2.52
PDS5A-208ENST00000508625 PKIGQ9Y2B9 76 aa-0.72□□□□□ -2.52
PDS5A-208ENST00000508625 V9GYV3 84 aa-0.72□□□□□ -2.52
PDS5A-208ENST00000508625 TRPM7Q96QT4 1865 aa-0.72□□□□□ -2.52
PDS5A-208ENST00000508625 PAPPAQ13219 1627 aa-0.72□□□□□ -2.52
PDS5A-208ENST00000508625 VPS13BQ7Z7G8 4022 aa-0.72□□□□□ -2.53
PDS5A-208ENST00000508625 USP9XQ93008 2570 aaPredicted RBP-0.72□□□□□ -2.53
PDS5A-208ENST00000508625 UHRF1BP1LA0JNW5 1464 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 TCOF1Q13428 1488 aaKnown RBP-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 NIPBLQ6KC79 2804 aaeCLIP-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 A0A087WUJ7 227 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 FXYD6-FXYD2A0A087WZ82 144 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 PNMA8CA0A1B0GUJ8 204 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 TCRBV3S1A0A5B6 114 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 SMIM23A6NLE4 172 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 TMEM114B3SHH9 223 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 C5orf58C9J3I9 102 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 KPNA4O00629 521 aaPredicted RBP-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 MFSD11O43934 449 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 CST8O60676 142 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 EDF1O60869 148 aaKnown RBP-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 IGKCP01834 107 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 S100A6P06703 90 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 ADCYAP1P18509 176 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 OGNP20774 298 aaKnown RBP-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 GTF2A1P52655 376 aaPredicted RBP-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 TMBIM6P55061 237 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 FADDQ13158 208 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 OR2T2Q6IF00 324 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 C4orf33Q8N1A6 199 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 COX7B2Q8TF08 81 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 BRK1Q8WUW1 75 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 CLEC2BQ92478 149 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 NMNAT1Q9HAN9 279 aaPredicted RBP-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 TAS2R8Q9NYW2 309 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 IL20Q9NYY1 176 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 ERG28Q9UKR5 140 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 GUCA1BQ9UMX6 200 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 LRRC37A2A6NM11 1700 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 KDM3BQ7LBC6 1761 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 LYSTQ99698 3801 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 TSC2P49815 1807 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 GAPVD1Q14C86 1478 aa-0.73□□□□□ -2.53
PDS5A-208ENST00000508625 MYH9P35579 1960 aaKnown RBP-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 SCN8AQ9UQD0 1980 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 GVINP1Q7Z2Y8 2422 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 LRRC37A3O60309 1634 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 LRP6O75581 1613 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 ABCA1O95477 2261 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 H3BQV1 296 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 CCDC179H3BU77 68 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 NPFFO15130 113 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 NDUFC2O95298 119 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 MT-ND6P03923 174 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 CXCL1P09341 107 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 TPM1P09493 284 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 IL7P13232 177 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 DEFA1P59665 94 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 MAXP61244 160 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 HSPE1P61604 102 aaKnown RBP-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 HSD17B12Q53GQ0 312 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 GPX7Q96SL4 187 aaPredicted RBP-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 WFDC6Q9BQY6 131 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 RNASE7Q9H1E1 156 aaKnown RBP-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 CCDC171Q6TFL3 1326 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 PLXNA1Q9UIW2 1896 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 MYO5AQ9Y4I1 1855 aaKnown RBP-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 NSD3Q9BZ95 1437 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 ADGRL3Q9HAR2 1447 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 MRC1P22897 1456 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 PXDNQ92626 1479 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 DLC1Q96QB1 1528 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 RNF213Q63HN8 5207 aa-0.74□□□□□ -2.53
PDS5A-208ENST00000508625 WDR87Q6ZQQ6 2873 aa-0.75□□□□□ -2.53
PDS5A-208ENST00000508625 LRP5O75197 1615 aa-0.75□□□□□ -2.53
PDS5A-208ENST00000508625 PTPN23Q9H3S7 1636 aa-0.75□□□□□ -2.53
PDS5A-208ENST00000508625 WNK3Q9BYP7 1800 aa-0.75□□□□□ -2.53
PDS5A-208ENST00000508625 PLXNA2O75051 1894 aa-0.75□□□□□ -2.53
PDS5A-208ENST00000508625 DNAH9Q9NYC9 4486 aa-0.75□□□□□ -2.53
PDS5A-208ENST00000508625 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.75□□□□□ -2.53
PDS5A-208ENST00000508625 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.75□□□□□ -2.53
PDS5A-208ENST00000508625 TRAV1-2A0A0B4J238 106 aa-0.75□□□□□ -2.53
PDS5A-208ENST00000508625 RIIAD1A6NNX1 92 aa-0.75□□□□□ -2.53
PDS5A-208ENST00000508625 K7ERJ3 54 aa-0.75□□□□□ -2.53
PDS5A-208ENST00000508625 NDUFS6O75380 124 aaKnown RBP-0.75□□□□□ -2.53
PDS5A-208ENST00000508625 NCR2O95944 276 aa-0.75□□□□□ -2.53
PDS5A-208ENST00000508625 INSL3P51460 131 aa-0.75□□□□□ -2.53
PDS5A-208ENST00000508625 RTL8BQ17RB0 113 aa-0.75□□□□□ -2.53
PDS5A-208ENST00000508625 DEFB112Q30KQ8 113 aa-0.75□□□□□ -2.53
PDS5A-208ENST00000508625 PRELID3AQ96N28 172 aa-0.75□□□□□ -2.53
PDS5A-208ENST00000508625 LRTM1Q9HBL6 345 aa-0.75□□□□□ -2.53
PDS5A-208ENST00000508625 NKIRAS1Q9NYS0 192 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms