RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 DEFB135Q30KP9 77 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 UTF1Q5T230 341 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 Q6P435 159 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 RPP25LQ8N5L8 163 aaKnown RBP2.31□□□□□ -2.04
NEDD4-208ENST00000508342 MGAM2Q2M2H8 2515 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 NDUFB1O75438 58 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 MPV17L2Q567V2 206 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 ZNF506Q5JVG8 444 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 WDR86Q86TI4 376 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 C17orf77Q96MU5 243 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 EPDR1Q9UM22 224 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 UBE2D4Q9Y2X8 147 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 V9GYY9 64 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 MYMXA0A1B0GTQ4 84 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 hADV29S1A0JD25 119 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 A8MWP6 167 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 TCRAP04437 139 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 SLC25A34Q6PIV7 304 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 LY6G5BQ8NDX9 201 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 NDUFA12Q9UI09 145 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 A0A0J9YWU9 116 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 HIGD1CA8MV81 97 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 NXPH4O95158 308 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 IGKV1-39P01597 117 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 IGKV1D-39P04432 117 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 ADAMTSL5Q6ZMM2 481 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 DEFB104AQ8WTQ1 72 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 WWC2-AS2Q96NR7 200 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 CAMK2N2Q96S95 79 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 TMEM242Q9NWH2 141 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 hDV102S1A0JD36 115 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 P0DMU3 169 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 FAM231AP0DMU4 169 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 FAM231CP0DMU5 169 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 ZNF493Q6ZR52 646 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 TRPT1Q86TN4 253 aaKnown RBP2.3□□□□□ -2.04
NEDD4-208ENST00000508342 C14orf178Q8N769 122 aaPredicted RBP2.3□□□□□ -2.04
NEDD4-208ENST00000508342 AGMATQ9BSE5 352 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 SETXQ7Z333 2677 aaKnown RBP2.3□□□□□ -2.04
NEDD4-208ENST00000508342 DEFB4AO15263 64 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 NPC2P61916 151 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 MIR17HGQ75NE6 70 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 ZNF625Q96I27 306 aaPredicted RBP2.3□□□□□ -2.04
NEDD4-208ENST00000508342 PMCHL2Q9BQD1 86 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 OVOL2Q9BRP0 275 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 SCRT1Q9BWW7 348 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 IGHV1OR15-1A0A075B7D0 117 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 TRBV5-3A0A0A0MS03 114 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 FAM229AH3BQW9 127 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 ATXN8Q156A1 80 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 NEGR1Q7Z3B1 354 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 ODF3L1Q8IXM7 274 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 ZC2HC1AQ96GY0 325 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 C8orf49Q96NF6 230 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 ESM1Q9NQ30 184 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 COX11Q9Y6N1 276 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 IGKV1-27A0A075B6S5 117 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 C10orf142B7Z368 130 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 PRSS46E5RG02 174 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 IGHV3-30P01768 117 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 IGHV3-33P01772 117 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 IGHV3-30-3P0DP02 117 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 IGHV3-30-5P0DP03 117 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 C9orf153Q5TBE3 101 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 LAIR2Q6ISS4 152 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 Q6ZQT7 251 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 LINC00336Q6ZUF6 198 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 Q8N7P7 452 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 DEFB105AQ8NG35 78 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 LINC01600Q96MT4 127 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 TRGV9Q99603 122 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 TRBV6-7A0A0A0MS04 114 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 IGHV1-24A0A0C4DH33 117 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 TRBV5-5A0A0J9YX44 114 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 DPM2O94777 84 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 PYGO2Q9BRQ0 406 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 TM2D1Q9BX74 207 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 KLK9Q9UKQ9 250 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 ETV2O00321 342 aaPredicted RBP2.3□□□□□ -2.04
NEDD4-208ENST00000508342 PYYP10082 97 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 XCL1P47992 114 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 HIST1H4AP62805 103 aaKnown RBP2.3□□□□□ -2.04
NEDD4-208ENST00000508342 LINC01590Q5TEZ4 76 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 EXOC3-AS1Q8N2X6 119 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 MARVELD1Q9BSK0 173 aa2.3□□□□□ -2.04
NEDD4-208ENST00000508342 IGLV2-18A0A075B6J9 118 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 TRAV12-2A0A075B6T6 113 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 TRAV3A0A0B4J244 114 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 GNG5P63218 68 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 LAGE3Q14657 143 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 C18orf65Q6ZTR6 163 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 NFE4Q86UQ8 179 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 NPBQ8NG41 125 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 SCRT2Q9NQ03 307 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 INAFM2P0DMQ5 153 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 DIAPH2-AS1Q14236 149 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 ZNF345Q14585 488 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 ATOH7Q8N100 152 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 LINC00482Q8N8I6 264 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 ATP6V0E2Q8NHE4 81 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms