RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 SNCGO76070 127 aa1.43□□□□□ -2.18
TRAPPC13-209ENST00000508304 SPCS2Q15005 226 aa1.43□□□□□ -2.18
TRAPPC13-209ENST00000508304 LINC01545Q5VT33 79 aa1.43□□□□□ -2.18
TRAPPC13-209ENST00000508304 ZGRF1Q86YA3 2104 aa1.43□□□□□ -2.18
TRAPPC13-209ENST00000508304 RP1L1Q8IWN7 2480 aaPredicted RBP1.43□□□□□ -2.18
TRAPPC13-209ENST00000508304 PTPRDP23468 1912 aa1.42□□□□□ -2.18
TRAPPC13-209ENST00000508304 NAIPQ13075 1403 aa1.42□□□□□ -2.18
TRAPPC13-209ENST00000508304 ASCC3Q8N3C0 2202 aaKnown RBP1.42□□□□□ -2.18
TRAPPC13-209ENST00000508304 A6NIN4 97 aa1.42□□□□□ -2.18
TRAPPC13-209ENST00000508304 CCDC179H3BU77 68 aa1.42□□□□□ -2.18
TRAPPC13-209ENST00000508304 IL5P05113 134 aa1.42□□□□□ -2.18
TRAPPC13-209ENST00000508304 PIPP12273 146 aaPredicted RBP1.42□□□□□ -2.18
TRAPPC13-209ENST00000508304 SPANXN1Q5VSR9 72 aa1.42□□□□□ -2.18
TRAPPC13-209ENST00000508304 E9PCH4 1651 aa1.42□□□□□ -2.18
TRAPPC13-209ENST00000508304 TRPM7Q96QT4 1865 aa1.41□□□□□ -2.18
TRAPPC13-209ENST00000508304 PEAK1Q9H792 1746 aa1.41□□□□□ -2.18
TRAPPC13-209ENST00000508304 TFF1P04155 84 aa1.41□□□□□ -2.18
TRAPPC13-209ENST00000508304 CCKP06307 115 aa1.41□□□□□ -2.18
TRAPPC13-209ENST00000508304 LINC00575Q6W349 94 aa1.41□□□□□ -2.18
TRAPPC13-209ENST00000508304 SBSPONQ8IVN8 264 aa1.41□□□□□ -2.18
TRAPPC13-209ENST00000508304 SPTSSAQ969W0 71 aa1.41□□□□□ -2.18
TRAPPC13-209ENST00000508304 MRPL35Q9NZE8 188 aaKnown RBP1.41□□□□□ -2.18
TRAPPC13-209ENST00000508304 NCOA6Q14686 2063 aaPredicted RBP1.41□□□□□ -2.18
TRAPPC13-209ENST00000508304 MYH13Q9UKX3 1938 aa1.4□□□□□ -2.18
TRAPPC13-209ENST00000508304 MED12Q93074 2177 aa1.4□□□□□ -2.19
TRAPPC13-209ENST00000508304 KIDINS220Q9ULH0 1771 aa1.4□□□□□ -2.19
TRAPPC13-209ENST00000508304 GRIN2AQ12879 1464 aa1.4□□□□□ -2.19
TRAPPC13-209ENST00000508304 TCRBV3S1A0A5B6 114 aa1.4□□□□□ -2.19
TRAPPC13-209ENST00000508304 FXYD1O00168 92 aa1.4□□□□□ -2.19
TRAPPC13-209ENST00000508304 PIRTP0C851 137 aa1.4□□□□□ -2.19
TRAPPC13-209ENST00000508304 EFNA4P52798 201 aa1.4□□□□□ -2.19
TRAPPC13-209ENST00000508304 TMEM242Q9NWH2 141 aa1.4□□□□□ -2.19
TRAPPC13-209ENST00000508304 SPAG17Q6Q759 2223 aa1.4□□□□□ -2.19
TRAPPC13-209ENST00000508304 WDR97A6NE52 1622 aa1.4□□□□□ -2.19
TRAPPC13-209ENST00000508304 LRP5O75197 1615 aa1.4□□□□□ -2.19
TRAPPC13-209ENST00000508304 MYOM3Q5VTT5 1437 aa1.4□□□□□ -2.19
TRAPPC13-209ENST00000508304 TET1Q8NFU7 2136 aa1.39□□□□□ -2.19
TRAPPC13-209ENST00000508304 CDK12Q9NYV4 1490 aaPredicted RBP1.39□□□□□ -2.19
TRAPPC13-209ENST00000508304 TRBV30A0A0K0K1B3 111 aa1.39□□□□□ -2.19
TRAPPC13-209ENST00000508304 SLC25A6P12236 298 aa1.39□□□□□ -2.19
TRAPPC13-209ENST00000508304 XAF1Q6GPH4 301 aa1.39□□□□□ -2.19
TRAPPC13-209ENST00000508304 OR2T2Q6IF00 324 aa1.39□□□□□ -2.19
TRAPPC13-209ENST00000508304 Q6ZS92 163 aa1.39□□□□□ -2.19
TRAPPC13-209ENST00000508304 ROCK2O75116 1388 aaKnown RBP1.38□□□□□ -2.19
TRAPPC13-209ENST00000508304 PHRF1Q9P1Y6 1649 aaKnown RBP1.38□□□□□ -2.19
TRAPPC13-209ENST00000508304 TRAV12-2A0A075B6T6 113 aa1.38□□□□□ -2.19
TRAPPC13-209ENST00000508304 PIGBOS1A0A0B4J2F0 54 aa1.38□□□□□ -2.19
TRAPPC13-209ENST00000508304 LOC101927531A0A1B0GV80 90 aa1.38□□□□□ -2.19
TRAPPC13-209ENST00000508304 CAV3P56539 151 aa1.38□□□□□ -2.19
TRAPPC13-209ENST00000508304 CYP2G1PQ6ZSU1 146 aa1.38□□□□□ -2.19
TRAPPC13-209ENST00000508304 PPP1R1CQ8WVI7 109 aa1.38□□□□□ -2.19
TRAPPC13-209ENST00000508304 SDF2Q99470 211 aa1.38□□□□□ -2.19
TRAPPC13-209ENST00000508304 CCL19Q99731 98 aa1.38□□□□□ -2.19
TRAPPC13-209ENST00000508304 NDUFA12Q9UI09 145 aa1.38□□□□□ -2.19
TRAPPC13-209ENST00000508304 TMEM2Q9UHN6 1383 aa1.37□□□□□ -2.19
TRAPPC13-209ENST00000508304 A0A1B0GV90 55 aa1.37□□□□□ -2.19
TRAPPC13-209ENST00000508304 NDUFB6O95139 128 aa1.37□□□□□ -2.19
TRAPPC13-209ENST00000508304 APODP05090 189 aa1.37□□□□□ -2.19
TRAPPC13-209ENST00000508304 HIST1H1DP16402 221 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-209ENST00000508304 MEIG1Q5JSS6 88 aa1.37□□□□□ -2.19
TRAPPC13-209ENST00000508304 SLC48A1Q6P1K1 146 aa1.37□□□□□ -2.19
TRAPPC13-209ENST00000508304 NDUFA11Q86Y39 141 aa1.37□□□□□ -2.19
TRAPPC13-209ENST00000508304 EML5Q05BV3 1969 aa1.37□□□□□ -2.19
TRAPPC13-209ENST00000508304 MYH6P13533 1939 aa1.36□□□□□ -2.19
TRAPPC13-209ENST00000508304 SPTBP11277 2137 aa1.36□□□□□ -2.19
TRAPPC13-209ENST00000508304 TEX49A0A1B0GTD5 131 aa1.36□□□□□ -2.19
TRAPPC13-209ENST00000508304 FXYD3Q14802 87 aa1.36□□□□□ -2.19
TRAPPC13-209ENST00000508304 S100A7L2Q5SY68 101 aa1.36□□□□□ -2.19
TRAPPC13-209ENST00000508304 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.36□□□□□ -2.19
TRAPPC13-209ENST00000508304 DPH3Q96FX2 82 aa1.36□□□□□ -2.19
TRAPPC13-209ENST00000508304 TMEM141Q96I45 108 aa1.36□□□□□ -2.19
TRAPPC13-209ENST00000508304 SEC11CQ9BY50 192 aa1.36□□□□□ -2.19
TRAPPC13-209ENST00000508304 RPRMQ9NS64 109 aa1.36□□□□□ -2.19
TRAPPC13-209ENST00000508304 COA4Q9NYJ1 87 aa1.36□□□□□ -2.19
TRAPPC13-209ENST00000508304 FLG2Q5D862 2391 aaPredicted RBP1.36□□□□□ -2.19
TRAPPC13-209ENST00000508304 CXorf51AA0A1B0GTR3 108 aa1.35□□□□□ -2.19
TRAPPC13-209ENST00000508304 DLEU1O43261 78 aa1.35□□□□□ -2.19
TRAPPC13-209ENST00000508304 IFNA17P01571 189 aa1.35□□□□□ -2.19
TRAPPC13-209ENST00000508304 IFI27L1Q96BM0 104 aa1.35□□□□□ -2.19
TRAPPC13-209ENST00000508304 SNRNP25Q9BV90 132 aaKnown RBP1.35□□□□□ -2.19
TRAPPC13-209ENST00000508304 RERGLQ9H628 205 aa1.35□□□□□ -2.19
TRAPPC13-209ENST00000508304 NAA60Q9H7X0 242 aa1.35□□□□□ -2.19
TRAPPC13-209ENST00000508304 COL6A6A6NMZ7 2263 aa1.35□□□□□ -2.19
TRAPPC13-209ENST00000508304 PITX3O75364 302 aa1.34□□□□□ -2.19
TRAPPC13-209ENST00000508304 SNAPC5O75971 98 aa1.34□□□□□ -2.19
TRAPPC13-209ENST00000508304 AKAIN1P0CW23 69 aa1.34□□□□□ -2.19
TRAPPC13-209ENST00000508304 TMEM203Q969S6 136 aa1.34□□□□□ -2.19
TRAPPC13-209ENST00000508304 GNG8Q9UK08 70 aa1.34□□□□□ -2.19
TRAPPC13-209ENST00000508304 WDR7Q9Y4E6 1490 aa1.34□□□□□ -2.19
TRAPPC13-209ENST00000508304 KIF13AQ9H1H9 1805 aa1.33□□□□□ -2.2
TRAPPC13-209ENST00000508304 DAPK1P53355 1430 aa1.33□□□□□ -2.2
TRAPPC13-209ENST00000508304 DLG5Q8TDM6 1919 aa1.33□□□□□ -2.2
TRAPPC13-209ENST00000508304 TRAV12-3A0A0B4J271 114 aa1.33□□□□□ -2.2
TRAPPC13-209ENST00000508304 A0A1W2PPM0 123 aa1.33□□□□□ -2.2
TRAPPC13-209ENST00000508304 FGF7P21781 194 aa1.33□□□□□ -2.2
TRAPPC13-209ENST00000508304 UBE2G1P62253 170 aa1.33□□□□□ -2.2
TRAPPC13-209ENST00000508304 TSKUQ8WUA8 353 aa1.33□□□□□ -2.2
TRAPPC13-209ENST00000508304 LINC00208Q96KT6 92 aa1.33□□□□□ -2.2
TRAPPC13-209ENST00000508304 SPEF2Q9C093 1822 aa1.33□□□□□ -2.2
TRAPPC13-209ENST00000508304 CTTNBP2Q8WZ74 1663 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms