RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 K7EPK0 472 aa4.35□□□□□ -1.71
VCAN-207ENST00000507162 MT-ND6P03923 174 aa4.35□□□□□ -1.71
VCAN-207ENST00000507162 TGFBR1P36897 503 aa4.35□□□□□ -1.71
VCAN-207ENST00000507162 RPS19P39019 145 aaKnown RBP4.35□□□□□ -1.71
VCAN-207ENST00000507162 TAS2R19P59542 299 aa4.35□□□□□ -1.71
VCAN-207ENST00000507162 ZNF506Q5JVG8 444 aa4.35□□□□□ -1.71
VCAN-207ENST00000507162 KRTAP26-1Q6PEX3 210 aa4.35□□□□□ -1.71
VCAN-207ENST00000507162 LINC00269Q8N2A0 174 aa4.35□□□□□ -1.71
VCAN-207ENST00000507162 C12orf45Q8N5I9 185 aaPredicted RBP4.35□□□□□ -1.71
VCAN-207ENST00000507162 TMEM229BQ8NBD8 167 aa4.35□□□□□ -1.71
VCAN-207ENST00000507162 ASB13Q8WXK3 278 aa4.35□□□□□ -1.71
VCAN-207ENST00000507162 KCNS1Q96KK3 526 aa4.35□□□□□ -1.71
VCAN-207ENST00000507162 IGLV1-50A0A075B6I6 118 aa4.34□□□□□ -1.71
VCAN-207ENST00000507162 A0A096LNI7 61 aa4.34□□□□□ -1.71
VCAN-207ENST00000507162 TRAV21A0A0B4J279 112 aa4.34□□□□□ -1.71
VCAN-207ENST00000507162 METTL15P1P0C7V9 234 aa4.34□□□□□ -1.71
VCAN-207ENST00000507162 ANXA3P12429 323 aa4.34□□□□□ -1.71
VCAN-207ENST00000507162 RPS10P46783 165 aaKnown RBP4.34□□□□□ -1.71
VCAN-207ENST00000507162 CSN1S1P47710 185 aa4.34□□□□□ -1.71
VCAN-207ENST00000507162 UBE2D1P51668 147 aa4.34□□□□□ -1.71
VCAN-207ENST00000507162 SRPXP78539 464 aa4.34□□□□□ -1.71
VCAN-207ENST00000507162 PDE6HQ13956 83 aa4.34□□□□□ -1.71
VCAN-207ENST00000507162 LGALSLQ3ZCW2 172 aaPredicted RBP4.34□□□□□ -1.71
VCAN-207ENST00000507162 FER1L6-AS1Q8NA97 138 aa4.34□□□□□ -1.71
VCAN-207ENST00000507162 OR1L4Q8NGR5 311 aa4.34□□□□□ -1.71
VCAN-207ENST00000507162 DIRC1Q969H9 104 aa4.34□□□□□ -1.71
VCAN-207ENST00000507162 C9orf85Q96MD7 179 aa4.34□□□□□ -1.71
VCAN-207ENST00000507162 CHCHD5Q9BSY4 110 aa4.34□□□□□ -1.71
VCAN-207ENST00000507162 PARLQ9H300 379 aa4.34□□□□□ -1.71
VCAN-207ENST00000507162 MTFP1Q9UDX5 166 aa4.34□□□□□ -1.71
VCAN-207ENST00000507162 BLOC1S6Q9UL45 172 aa4.34□□□□□ -1.71
VCAN-207ENST00000507162 FAM25AB3EWG3 89 aa4.33□□□□□ -1.72
VCAN-207ENST00000507162 FAM25CB3EWG5 89 aa4.33□□□□□ -1.72
VCAN-207ENST00000507162 FAM25GB3EWG6 89 aa4.33□□□□□ -1.72
VCAN-207ENST00000507162 APOA1P02647 267 aa4.33□□□□□ -1.72
VCAN-207ENST00000507162 CRYGAP11844 174 aa4.33□□□□□ -1.72
VCAN-207ENST00000507162 AQP4P55087 323 aa4.33□□□□□ -1.72
VCAN-207ENST00000507162 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
VCAN-207ENST00000507162 C1orf137Q5JT78 98 aa4.33□□□□□ -1.72
VCAN-207ENST00000507162 MIC13Q5XKP0 118 aa4.33□□□□□ -1.72
VCAN-207ENST00000507162 OR10G7Q8NGN6 311 aa4.33□□□□□ -1.72
VCAN-207ENST00000507162 MGST2Q99735 147 aa4.33□□□□□ -1.72
VCAN-207ENST00000507162 GFRA4Q9GZZ7 299 aa4.33□□□□□ -1.72
VCAN-207ENST00000507162 JPT2Q9H910 190 aa4.33□□□□□ -1.72
VCAN-207ENST00000507162 FAM24AA6NFZ4 105 aa4.32□□□□□ -1.72
VCAN-207ENST00000507162 GAGE10A6NGK3 116 aa4.32□□□□□ -1.72
VCAN-207ENST00000507162 F6UZH7 168 aa4.32□□□□□ -1.72
VCAN-207ENST00000507162 HPGDSO60760 199 aa4.32□□□□□ -1.72
VCAN-207ENST00000507162 NBEAP1P0C6P0 100 aa4.32□□□□□ -1.72
VCAN-207ENST00000507162 CAMLGP49069 296 aa4.32□□□□□ -1.72
VCAN-207ENST00000507162 ZFP2Q6ZN57 461 aa4.32□□□□□ -1.72
VCAN-207ENST00000507162 ARL6IP6Q8N6S5 226 aa4.32□□□□□ -1.72
VCAN-207ENST00000507162 SUN5Q8TC36 379 aa4.32□□□□□ -1.72
VCAN-207ENST00000507162 CNBD2Q96M20 576 aa4.32□□□□□ -1.72
VCAN-207ENST00000507162 PFDN5Q99471 154 aa4.32□□□□□ -1.72
VCAN-207ENST00000507162 TMEM14CQ9P0S9 112 aa4.32□□□□□ -1.72
VCAN-207ENST00000507162 LINC00474Q9P2X8 69 aa4.32□□□□□ -1.72
VCAN-207ENST00000507162 RABL2BQ9UNT1 228 aa4.32□□□□□ -1.72
VCAN-207ENST00000507162 TRBV6-8A0A0A6YYG3 113 aa4.31□□□□□ -1.72
VCAN-207ENST00000507162 DUXBA0A1W2PPF3 345 aa4.31□□□□□ -1.72
VCAN-207ENST00000507162 A8MWV9 139 aa4.31□□□□□ -1.72
VCAN-207ENST00000507162 FNDC10F2Z333 226 aa4.31□□□□□ -1.72
VCAN-207ENST00000507162 SSSCA1O60232 199 aa4.31□□□□□ -1.72
VCAN-207ENST00000507162 SLC25A6P12236 298 aa4.31□□□□□ -1.72
VCAN-207ENST00000507162 LSM3P62310 102 aaKnown RBP4.31□□□□□ -1.72
VCAN-207ENST00000507162 RNF151Q2KHN1 245 aa4.31□□□□□ -1.72
VCAN-207ENST00000507162 HIGD2BQ4VC39 106 aa4.31□□□□□ -1.72
VCAN-207ENST00000507162 NRARPQ7Z6K4 114 aa4.31□□□□□ -1.72
VCAN-207ENST00000507162 SCGB3A2Q96PL1 93 aa4.31□□□□□ -1.72
VCAN-207ENST00000507162 NMES1Q9C002 83 aa4.31□□□□□ -1.72
VCAN-207ENST00000507162 PRR34Q9NV39 138 aa4.31□□□□□ -1.72
VCAN-207ENST00000507162 PIGBOS1A0A0B4J2F0 54 aa4.3□□□□□ -1.72
VCAN-207ENST00000507162 RBAKDNA6NC62 111 aa4.3□□□□□ -1.72
VCAN-207ENST00000507162 PTTG1O95997 202 aa4.3□□□□□ -1.72
VCAN-207ENST00000507162 RANP62826 216 aaKnown RBP4.3□□□□□ -1.72
VCAN-207ENST00000507162 RBX1P62877 108 aa4.3□□□□□ -1.72
VCAN-207ENST00000507162 RPL36AP83881 106 aaKnown RBP4.3□□□□□ -1.72
VCAN-207ENST00000507162 ARL16Q0P5N6 197 aa4.3□□□□□ -1.72
VCAN-207ENST00000507162 GAGE6Q13070 117 aa4.3□□□□□ -1.72
VCAN-207ENST00000507162 FAM74A4Q5TZK3 123 aa4.3□□□□□ -1.72
VCAN-207ENST00000507162 CLVS1Q8IUQ0 354 aaPredicted RBP4.3□□□□□ -1.72
VCAN-207ENST00000507162 DYNC2LI1Q8TCX1 351 aa4.3□□□□□ -1.72
VCAN-207ENST00000507162 RPL36ALQ969Q0 106 aaKnown RBP4.3□□□□□ -1.72
VCAN-207ENST00000507162 PTH2Q96A98 100 aa4.3□□□□□ -1.72
VCAN-207ENST00000507162 SMIM8Q96KF7 97 aa4.3□□□□□ -1.72
VCAN-207ENST00000507162 HYLS1Q96M11 299 aa4.3□□□□□ -1.72
VCAN-207ENST00000507162 PRRT1Q99946 306 aa4.3□□□□□ -1.72
VCAN-207ENST00000507162 TREM1Q9NP99 234 aa4.3□□□□□ -1.72
VCAN-207ENST00000507162 RABL2AQ9UBK7 228 aaPredicted RBP4.3□□□□□ -1.72
VCAN-207ENST00000507162 LENEPQ9Y5L5 61 aa4.3□□□□□ -1.72
VCAN-207ENST00000507162 C9orf118A6NHY6 69 aa4.29□□□□□ -1.72
VCAN-207ENST00000507162 H0Y9J4 135 aa4.29□□□□□ -1.72
VCAN-207ENST00000507162 TSC22D2O75157 780 aa4.29□□□□□ -1.72
VCAN-207ENST00000507162 AKAIN1P0CW23 69 aa4.29□□□□□ -1.72
VCAN-207ENST00000507162 RPL13AP40429 203 aaKnown RBP4.29□□□□□ -1.72
VCAN-207ENST00000507162 S100A10P60903 97 aa4.29□□□□□ -1.72
VCAN-207ENST00000507162 UBE2D3P61077 147 aa4.29□□□□□ -1.72
VCAN-207ENST00000507162 PKIAP61925 76 aa4.29□□□□□ -1.72
VCAN-207ENST00000507162 UBE2D2P62837 147 aa4.29□□□□□ -1.72
VCAN-207ENST00000507162 CYCSP99999 105 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms