RNA–Protein interactions for RNA: ENST00000506401.6

ITGA3-207, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-207ENST00000506401 GIG44P09565 113 aaPredicted RBP13.03□□□□□ -0.32
ITGA3-207ENST00000506401 TRGC1P0CF51 173 aa13.03□□□□□ -0.32
ITGA3-207ENST00000506401 C1orf158Q8N1D5 194 aa13.03□□□□□ -0.32
ITGA3-207ENST00000506401 GATD1Q8NB37 220 aa13.03□□□□□ -0.32
ITGA3-207ENST00000506401 GOLT1BQ9Y3E0 138 aa13.03□□□□□ -0.32
ITGA3-207ENST00000506401 EGFEM1PQ0D2K5 195 aa13.02□□□□□ -0.32
ITGA3-207ENST00000506401 ZNF493Q6ZR52 646 aa13.02□□□□□ -0.32
ITGA3-207ENST00000506401 LOC102724200A0A096LPH7 203 aaPredicted RBP13.02□□□□□ -0.33
ITGA3-207ENST00000506401 SMIM15Q7Z3B0 74 aa13.02□□□□□ -0.33
ITGA3-207ENST00000506401 MSRB1Q9NZV6 116 aa13.02□□□□□ -0.33
ITGA3-207ENST00000506401 MDFICQ9P1T7 246 aa13.02□□□□□ -0.33
ITGA3-207ENST00000506401 IGHV3OR16-12A0A075B7B8 117 aa13.01□□□□□ -0.33
ITGA3-207ENST00000506401 SLAQ13239 276 aa13.01□□□□□ -0.33
ITGA3-207ENST00000506401 C9orf85Q96MD7 179 aa13.01□□□□□ -0.33
ITGA3-207ENST00000506401 M0R381 172 aa13□□□□□ -0.33
ITGA3-207ENST00000506401 HIST1H2BKO60814 126 aa13□□□□□ -0.33
ITGA3-207ENST00000506401 HIST1H2BJP06899 126 aa13□□□□□ -0.33
ITGA3-207ENST00000506401 HIST1H2BOP23527 126 aa13□□□□□ -0.33
ITGA3-207ENST00000506401 HIST1H2BBP33778 126 aa13□□□□□ -0.33
ITGA3-207ENST00000506401 HIST1H2BDP58876 126 aa13□□□□□ -0.33
ITGA3-207ENST00000506401 KRTAP10-11P60412 298 aa13□□□□□ -0.33
ITGA3-207ENST00000506401 HIST1H2BCP62807 126 aa13□□□□□ -0.33
ITGA3-207ENST00000506401 HIST2H2BEQ16778 126 aa13□□□□□ -0.33
ITGA3-207ENST00000506401 HIST2H2BFQ5QNW6 126 aaPredicted RBP13□□□□□ -0.33
ITGA3-207ENST00000506401 HIST1H2BHQ93079 126 aa13□□□□□ -0.33
ITGA3-207ENST00000506401 HIST1H2BNQ99877 126 aa13□□□□□ -0.33
ITGA3-207ENST00000506401 HIST1H2BMQ99879 126 aa13□□□□□ -0.33
ITGA3-207ENST00000506401 TMEM191AQ9H0A3 160 aa13□□□□□ -0.33
ITGA3-207ENST00000506401 MUC4Q99102 2169 aa12.99□□□□□ -0.33
ITGA3-207ENST00000506401 KIAA1644Q3SXP7 199 aa12.99□□□□□ -0.33
ITGA3-207ENST00000506401 PKD1L1Q8TDX9 2849 aa12.99□□□□□ -0.33
ITGA3-207ENST00000506401 SPRY2O43597 315 aa12.99□□□□□ -0.33
ITGA3-207ENST00000506401 S100A6P06703 90 aa12.99□□□□□ -0.33
ITGA3-207ENST00000506401 ZNF415Q09FC8 603 aa12.99□□□□□ -0.33
ITGA3-207ENST00000506401 CSNK1G2-AS1Q8NCQ2 148 aa12.99□□□□□ -0.33
ITGA3-207ENST00000506401 KIR2DL5BA0A0G2JN68 375 aa12.98□□□□□ -0.33
ITGA3-207ENST00000506401 KIR2DL5BA0A0G2JPC4 375 aa12.98□□□□□ -0.33
ITGA3-207ENST00000506401 APOC4P55056 127 aa12.98□□□□□ -0.33
ITGA3-207ENST00000506401 FAM104BQ5XKR9 115 aa12.98□□□□□ -0.33
ITGA3-207ENST00000506401 KIR2DL5AQ8N109 375 aa12.98□□□□□ -0.33
ITGA3-207ENST00000506401 SYT8Q8NBV8 401 aa12.98□□□□□ -0.33
ITGA3-207ENST00000506401 KIR2DL5BQ8NHK3 375 aa12.98□□□□□ -0.33
ITGA3-207ENST00000506401 G3V4G9 280 aa12.97□□□□□ -0.33
ITGA3-207ENST00000506401 NXPH4O95158 308 aa12.97□□□□□ -0.33
ITGA3-207ENST00000506401 DMRTA1Q5VZB9 504 aa12.97□□□□□ -0.33
ITGA3-207ENST00000506401 PRM2P04554 102 aa12.97□□□□□ -0.33
ITGA3-207ENST00000506401 IGHV4-30-4P0DP06 118 aa12.96□□□□□ -0.33
ITGA3-207ENST00000506401 EVI2AP22794 236 aa12.96□□□□□ -0.33
ITGA3-207ENST00000506401 NDUFA6P56556 154 aa12.96□□□□□ -0.33
ITGA3-207ENST00000506401 SAMD5Q5TGI4 173 aa12.96□□□□□ -0.33
ITGA3-207ENST00000506401 AMN1Q8IY45 258 aa12.96□□□□□ -0.33
ITGA3-207ENST00000506401 LINC00518Q8N0U6 118 aa12.96□□□□□ -0.33
ITGA3-207ENST00000506401 RCHY1Q96PM5 261 aa12.96□□□□□ -0.33
ITGA3-207ENST00000506401 ANK2Q01484 3957 aa12.96□□□□□ -0.33
ITGA3-207ENST00000506401 CMYA5Q8N3K9 4069 aa12.95□□□□□ -0.34
ITGA3-207ENST00000506401 RIPPLY3P57055 190 aa12.95□□□□□ -0.34
ITGA3-207ENST00000506401 SPXQ9BT56 116 aa12.95□□□□□ -0.34
ITGA3-207ENST00000506401 GSN-AS1Q9NRJ2 163 aa12.95□□□□□ -0.34
ITGA3-207ENST00000506401 AZU1P20160 251 aa12.95□□□□□ -0.34
ITGA3-207ENST00000506401 SRIP30626 198 aa12.95□□□□□ -0.34
ITGA3-207ENST00000506401 ZNF705AQ6ZN79 300 aaPredicted RBP12.95□□□□□ -0.34
ITGA3-207ENST00000506401 AP1S3Q96PC3 154 aa12.95□□□□□ -0.34
ITGA3-207ENST00000506401 ZNF876PQ49A33 203 aa12.94□□□□□ -0.34
ITGA3-207ENST00000506401 C11orf72Q8NBR9 251 aa12.94□□□□□ -0.34
ITGA3-207ENST00000506401 TMEM263Q8WUH6 116 aaKnown RBP12.94□□□□□ -0.34
ITGA3-207ENST00000506401 M0R2P5 195 aa12.93□□□□□ -0.34
ITGA3-207ENST00000506401 UBE2CO00762 179 aa12.93□□□□□ -0.34
ITGA3-207ENST00000506401 RAB4AP20338 218 aa12.93□□□□□ -0.34
ITGA3-207ENST00000506401 RRN3P1Q2M238 152 aa12.93□□□□□ -0.34
ITGA3-207ENST00000506401 MRPL51Q4U2R6 128 aaKnown RBP12.93□□□□□ -0.34
ITGA3-207ENST00000506401 ALKBH7Q9BT30 221 aaPredicted RBP12.93□□□□□ -0.34
ITGA3-207ENST00000506401 SMIM17P0DL12 118 aa12.92□□□□□ -0.34
ITGA3-207ENST00000506401 C14orf178Q8N769 122 aaPredicted RBP12.92□□□□□ -0.34
ITGA3-207ENST00000506401 PTH2Q96A98 100 aa12.92□□□□□ -0.34
ITGA3-207ENST00000506401 DPH3P1Q9H4G8 78 aa12.92□□□□□ -0.34
ITGA3-207ENST00000506401 RNASE8Q8TDE3 154 aaKnown RBP12.92□□□□□ -0.34
ITGA3-207ENST00000506401 RNF185Q96GF1 192 aa12.92□□□□□ -0.34
ITGA3-207ENST00000506401 C16orf74Q96GX8 76 aa12.92□□□□□ -0.34
ITGA3-207ENST00000506401 CKS2P33552 79 aa12.91□□□□□ -0.34
ITGA3-207ENST00000506401 A8MZ25 164 aa12.9□□□□□ -0.34
ITGA3-207ENST00000506401 PPBPP02775 128 aa12.9□□□□□ -0.34
ITGA3-207ENST00000506401 SNRPEP62304 92 aaKnown RBP12.9□□□□□ -0.34
ITGA3-207ENST00000506401 Q0VG73 95 aa12.9□□□□□ -0.34
ITGA3-207ENST00000506401 OR10J3Q5JRS4 329 aa12.9□□□□□ -0.34
ITGA3-207ENST00000506401 PIK3CD-AS1Q5SR53 167 aa12.9□□□□□ -0.34
ITGA3-207ENST00000506401 D6R8Y8 96 aa12.9□□□□□ -0.34
ITGA3-207ENST00000506401 ORMDL3Q8N138 153 aa12.9□□□□□ -0.34
ITGA3-207ENST00000506401 JPT2Q9H910 190 aa12.9□□□□□ -0.34
ITGA3-207ENST00000506401 U3KQK5 164 aa12.9□□□□□ -0.34
ITGA3-207ENST00000506401 C5orf52A6NGY3 159 aa12.89□□□□□ -0.35
ITGA3-207ENST00000506401 SMIM9A6NGZ8 99 aa12.89□□□□□ -0.35
ITGA3-207ENST00000506401 BAGE3Q86Y29 109 aa12.89□□□□□ -0.35
ITGA3-207ENST00000506401 PRELID3AQ96N28 172 aa12.89□□□□□ -0.35
ITGA3-207ENST00000506401 S100A12P80511 92 aa12.88□□□□□ -0.35
ITGA3-207ENST00000506401 IL17DQ8TAD2 202 aa12.88□□□□□ -0.35
ITGA3-207ENST00000506401 C18orf32Q8TCD1 76 aa12.88□□□□□ -0.35
ITGA3-207ENST00000506401 MGPP08493 103 aa12.88□□□□□ -0.35
ITGA3-207ENST00000506401 DEFB135Q30KP9 77 aa12.88□□□□□ -0.35
ITGA3-207ENST00000506401 COA6Q5JTJ3 125 aaKnown RBP12.88□□□□□ -0.35
ITGA3-207ENST00000506401 MRAP2Q96G30 205 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms