RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 ZNF645Q8N7E2 425 aa6.59□□□□□ -1.35
HTT-203ENST00000506137 FAM218AQ96MZ4 157 aa6.59□□□□□ -1.35
HTT-203ENST00000506137 CXCL16Q9H2A7 254 aa6.59□□□□□ -1.35
HTT-203ENST00000506137 C11orf21Q9P2W6 132 aa6.59□□□□□ -1.35
HTT-203ENST00000506137 IGHV1OR15-1A0A075B7D0 117 aa6.58□□□□□ -1.36
HTT-203ENST00000506137 E7EQL1 145 aa6.58□□□□□ -1.36
HTT-203ENST00000506137 K7ERJ3 54 aa6.58□□□□□ -1.36
HTT-203ENST00000506137 FRMD6-AS1P0C7T7 363 aa6.58□□□□□ -1.36
HTT-203ENST00000506137 FGF12P61328 243 aa6.58□□□□□ -1.36
HTT-203ENST00000506137 GNB1P62873 340 aa6.58□□□□□ -1.36
HTT-203ENST00000506137 CIRBPQ14011 172 aaKnown RBP6.58□□□□□ -1.36
HTT-203ENST00000506137 SLC25A2Q9BXI2 301 aa6.58□□□□□ -1.36
HTT-203ENST00000506137 Q9H3A6 140 aa6.58□□□□□ -1.36
HTT-203ENST00000506137 DYNLRB1Q9NP97 96 aa6.58□□□□□ -1.36
HTT-203ENST00000506137 LRRK1Q38SD2 2015 aa6.58□□□□□ -1.36
HTT-203ENST00000506137 TACC2O95359 2948 aa6.57□□□□□ -1.36
HTT-203ENST00000506137 DCHS2Q6V1P9 2916 aa6.57□□□□□ -1.36
HTT-203ENST00000506137 LINC00473A8K010 186 aa6.57□□□□□ -1.36
HTT-203ENST00000506137 CCKP06307 115 aa6.57□□□□□ -1.36
HTT-203ENST00000506137 FUSP35637 526 aaKnown RBP eCLIP6.57□□□□□ -1.36
HTT-203ENST00000506137 LINC00310P59036 64 aa6.57□□□□□ -1.36
HTT-203ENST00000506137 BLCAPP62952 87 aa6.57□□□□□ -1.36
HTT-203ENST00000506137 NOXRED1Q6NXP6 359 aa6.57□□□□□ -1.36
HTT-203ENST00000506137 NUP37Q8NFH4 326 aa6.57□□□□□ -1.36
HTT-203ENST00000506137 PRSS3P2Q8NHM4 247 aa6.57□□□□□ -1.36
HTT-203ENST00000506137 ZNF706Q9Y5V0 76 aaPredicted RBP6.57□□□□□ -1.36
HTT-203ENST00000506137 ARL2-SNX15V9GYD0 113 aa6.57□□□□□ -1.36
HTT-203ENST00000506137 CUBNO60494 3623 aa6.56□□□□□ -1.36
HTT-203ENST00000506137 TNRC6BQ9UPQ9 1833 aaKnown RBP6.56□□□□□ -1.36
HTT-203ENST00000506137 IGHV3-20A0A0C4DH32 117 aa6.56□□□□□ -1.36
HTT-203ENST00000506137 A0A1W2PS18 150 aa6.56□□□□□ -1.36
HTT-203ENST00000506137 FXYD1O00168 92 aa6.56□□□□□ -1.36
HTT-203ENST00000506137 IGHV4-39P01824 125 aa6.56□□□□□ -1.36
HTT-203ENST00000506137 IGHV1-2P23083 117 aa6.56□□□□□ -1.36
HTT-203ENST00000506137 RSPO1Q2MKA7 263 aaPredicted RBP6.56□□□□□ -1.36
HTT-203ENST00000506137 DEFB121Q5J5C9 76 aa6.56□□□□□ -1.36
HTT-203ENST00000506137 C1orf229Q6ZS94 237 aaPredicted RBP6.56□□□□□ -1.36
HTT-203ENST00000506137 WFDC5Q8TCV5 224 aa6.56□□□□□ -1.36
HTT-203ENST00000506137 TP53TG3Q9ULZ0 132 aa6.56□□□□□ -1.36
HTT-203ENST00000506137 IGLV5-45A0A087WSX0 123 aa6.55□□□□□ -1.36
HTT-203ENST00000506137 IGHV7-81A0A0B4J1V7 117 aa6.55□□□□□ -1.36
HTT-203ENST00000506137 SLC48A1Q6P1K1 146 aa6.55□□□□□ -1.36
HTT-203ENST00000506137 ZFP2Q6ZN57 461 aa6.55□□□□□ -1.36
HTT-203ENST00000506137 LINC00173Q6ZV60 143 aa6.55□□□□□ -1.36
HTT-203ENST00000506137 FAM216BQ8N7L0 139 aa6.55□□□□□ -1.36
HTT-203ENST00000506137 XAGE1AQ9HD64 81 aa6.55□□□□□ -1.36
HTT-203ENST00000506137 OSTCQ9NRP0 149 aa6.55□□□□□ -1.36
HTT-203ENST00000506137 MRPL35Q9NZE8 188 aaKnown RBP6.55□□□□□ -1.36
HTT-203ENST00000506137 COL4A2P08572 1712 aa6.54□□□□□ -1.36
HTT-203ENST00000506137 TRGV8A0A0C4DH27 118 aa6.54□□□□□ -1.36
HTT-203ENST00000506137 J3QLW9 94 aa6.54□□□□□ -1.36
HTT-203ENST00000506137 PRH1P02810 166 aa6.54□□□□□ -1.36
HTT-203ENST00000506137 IGHV4-38-2P0DP08 117 aa6.54□□□□□ -1.36
HTT-203ENST00000506137 CD28P10747 220 aa6.54□□□□□ -1.36
HTT-203ENST00000506137 LINC00205P59089 165 aa6.54□□□□□ -1.36
HTT-203ENST00000506137 RPL30P62888 115 aaKnown RBP6.54□□□□□ -1.36
HTT-203ENST00000506137 Q1T7F1 81 aa6.54□□□□□ -1.36
HTT-203ENST00000506137 NRACQ8N912 160 aa6.54□□□□□ -1.36
HTT-203ENST00000506137 TMEM190Q8WZ59 177 aa6.54□□□□□ -1.36
HTT-203ENST00000506137 PCDH15Q96QU1 1955 aa6.54□□□□□ -1.36
HTT-203ENST00000506137 BAZ2BQ9UIF8 2168 aaKnown RBP6.54□□□□□ -1.36
HTT-203ENST00000506137 LCTP09848 1927 aa6.53□□□□□ -1.36
HTT-203ENST00000506137 TRAV3A0A0B4J244 114 aa6.53□□□□□ -1.36
HTT-203ENST00000506137 TMEM272A0A1B0GTI8 110 aa6.53□□□□□ -1.36
HTT-203ENST00000506137 TCRBV4S1A1TA0A5B7 111 aa6.53□□□□□ -1.36
HTT-203ENST00000506137 MARCH3Q86UD3 253 aa6.53□□□□□ -1.36
HTT-203ENST00000506137 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.53□□□□□ -1.36
HTT-203ENST00000506137 FLVCR1-AS1Q8TAF5 88 aa6.53□□□□□ -1.36
HTT-203ENST00000506137 MED12LQ86YW9 2145 aa6.53□□□□□ -1.36
HTT-203ENST00000506137 NYNRINQ9P2P1 1898 aaKnown RBP6.52□□□□□ -1.37
HTT-203ENST00000506137 IGLV3-10A0A075B6K4 115 aa6.52□□□□□ -1.37
HTT-203ENST00000506137 IGKV6D-41A0A0C4DH26 115 aa6.52□□□□□ -1.37
HTT-203ENST00000506137 C2orf70A6NJV1 201 aa6.52□□□□□ -1.37
HTT-203ENST00000506137 K7EQD1 137 aa6.52□□□□□ -1.37
HTT-203ENST00000506137 PEX7O00628 323 aa6.52□□□□□ -1.37
HTT-203ENST00000506137 INSL4Q14641 139 aa6.52□□□□□ -1.37
HTT-203ENST00000506137 SS18Q15532 418 aa6.52□□□□□ -1.37
HTT-203ENST00000506137 Q6ZS52 159 aa6.52□□□□□ -1.37
HTT-203ENST00000506137 LINC00597Q9H2U6 94 aa6.52□□□□□ -1.37
HTT-203ENST00000506137 C7orf69Q9H7B7 122 aa6.52□□□□□ -1.37
HTT-203ENST00000506137 CSAG2Q9Y5P2 127 aa6.52□□□□□ -1.37
HTT-203ENST00000506137 NSD1Q96L73 2696 aaPredicted RBP6.52□□□□□ -1.37
HTT-203ENST00000506137 IGHV3OR15-7A0A075B7D8 119 aa6.51□□□□□ -1.37
HTT-203ENST00000506137 CRYM-AS1A6NIL9 109 aa6.51□□□□□ -1.37
HTT-203ENST00000506137 BMPR1BO00238 502 aa6.51□□□□□ -1.37
HTT-203ENST00000506137 IL4P05112 153 aa6.51□□□□□ -1.37
HTT-203ENST00000506137 INAFM2P0DMQ5 153 aa6.51□□□□□ -1.37
HTT-203ENST00000506137 Q6ZRM9 215 aa6.51□□□□□ -1.37
HTT-203ENST00000506137 PDPNQ86YL7 162 aa6.51□□□□□ -1.37
HTT-203ENST00000506137 CLDND2Q8NHS1 167 aa6.51□□□□□ -1.37
HTT-203ENST00000506137 FAM103A1Q9BTL3 118 aaKnown RBP6.51□□□□□ -1.37
HTT-203ENST00000506137 CMC2Q9NRP2 79 aa6.51□□□□□ -1.37
HTT-203ENST00000506137 MXRA5Q9NR99 2828 aa6.51□□□□□ -1.37
HTT-203ENST00000506137 POLEQ07864 2286 aa6.51□□□□□ -1.37
HTT-203ENST00000506137 CPSF4O95639 269 aaKnown RBP6.5□□□□□ -1.37
HTT-203ENST00000506137 NPYP01303 97 aa6.5□□□□□ -1.37
HTT-203ENST00000506137 EGR2P11161 476 aaPredicted RBP6.5□□□□□ -1.37
HTT-203ENST00000506137 GCHFRP30047 84 aa6.5□□□□□ -1.37
HTT-203ENST00000506137 DSCR4P56555 118 aaPredicted RBP6.5□□□□□ -1.37
HTT-203ENST00000506137 SNRPGP62308 76 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms