RNA–Protein interactions for RNA: ENST00000505119.1

NEK1-202, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-202ENST00000505119 AKAP6Q13023 2319 aa-0.89□□□□□ -2.55
NEK1-202ENST00000505119 VWFP04275 2813 aa-0.89□□□□□ -2.55
NEK1-202ENST00000505119 LOC107984640A0A0U1RRK4 108 aa-0.89□□□□□ -2.55
NEK1-202ENST00000505119 MAP1LC3B2A6NCE7 125 aa-0.89□□□□□ -2.55
NEK1-202ENST00000505119 M0QZK8 103 aa-0.89□□□□□ -2.55
NEK1-202ENST00000505119 TMEM78Q5T7P6 136 aa-0.89□□□□□ -2.55
NEK1-202ENST00000505119 OR4S1Q8NGB4 309 aa-0.89□□□□□ -2.55
NEK1-202ENST00000505119 LXNQ9BS40 222 aa-0.89□□□□□ -2.55
NEK1-202ENST00000505119 BOLA2Q9H3K6 86 aa-0.89□□□□□ -2.55
NEK1-202ENST00000505119 YTHDC2Q9H6S0 1430 aaKnown RBP-0.89□□□□□ -2.55
NEK1-202ENST00000505119 HERC1Q15751 4861 aa-0.9□□□□□ -2.55
NEK1-202ENST00000505119 CASZ1Q86V15 1759 aa-0.9□□□□□ -2.55
NEK1-202ENST00000505119 PPP5D1E7EU14 171 aa-0.9□□□□□ -2.55
NEK1-202ENST00000505119 PGRMC1O00264 195 aaKnown RBP-0.9□□□□□ -2.55
NEK1-202ENST00000505119 PRM1P04553 51 aa-0.9□□□□□ -2.55
NEK1-202ENST00000505119 CKS2P33552 79 aa-0.9□□□□□ -2.55
NEK1-202ENST00000505119 SRP9P49458 86 aaKnown RBP-0.9□□□□□ -2.55
NEK1-202ENST00000505119 POLR2JP52435 117 aaKnown RBP-0.9□□□□□ -2.55
NEK1-202ENST00000505119 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.9□□□□□ -2.55
NEK1-202ENST00000505119 SMIM11BQ8TCY0 68 aa-0.9□□□□□ -2.55
NEK1-202ENST00000505119 MED31Q9Y3C7 131 aa-0.9□□□□□ -2.55
NEK1-202ENST00000505119 KIF13AQ9H1H9 1805 aa-0.91□□□□□ -2.55
NEK1-202ENST00000505119 A0A1W2PRE2 83 aa-0.91□□□□□ -2.56
NEK1-202ENST00000505119 TMEM238C9JI98 176 aa-0.91□□□□□ -2.56
NEK1-202ENST00000505119 CFDP00746 253 aaPredicted RBP-0.91□□□□□ -2.56
NEK1-202ENST00000505119 SERPINB1P30740 379 aa-0.91□□□□□ -2.56
NEK1-202ENST00000505119 Q96NJ1 140 aa-0.91□□□□□ -2.56
NEK1-202ENST00000505119 STOML2Q9UJZ1 356 aa-0.91□□□□□ -2.56
NEK1-202ENST00000505119 TRAPPC2LQ9UL33 140 aa-0.91□□□□□ -2.56
NEK1-202ENST00000505119 PTPN13Q12923 2485 aa-0.91□□□□□ -2.56
NEK1-202ENST00000505119 SETXQ7Z333 2677 aaKnown RBP-0.92□□□□□ -2.56
NEK1-202ENST00000505119 TRAV17A0A0B4J275 112 aa-0.92□□□□□ -2.56
NEK1-202ENST00000505119 ZNF670-ZNF695F2Z2N8 137 aa-0.92□□□□□ -2.56
NEK1-202ENST00000505119 SLC25A5P05141 298 aaKnown RBP-0.92□□□□□ -2.56
NEK1-202ENST00000505119 RPL7P18124 248 aaKnown RBP-0.92□□□□□ -2.56
NEK1-202ENST00000505119 RPL22P35268 128 aaKnown RBP-0.92□□□□□ -2.56
NEK1-202ENST00000505119 POLR2HP52434 150 aaKnown RBP-0.92□□□□□ -2.56
NEK1-202ENST00000505119 LSM3P62310 102 aaKnown RBP-0.92□□□□□ -2.56
NEK1-202ENST00000505119 OR2T2Q6IF00 324 aa-0.92□□□□□ -2.56
NEK1-202ENST00000505119 C3orf33Q6P1S2 294 aa-0.92□□□□□ -2.56
NEK1-202ENST00000505119 STX12Q86Y82 276 aa-0.92□□□□□ -2.56
NEK1-202ENST00000505119 BRK1Q8WUW1 75 aa-0.92□□□□□ -2.56
NEK1-202ENST00000505119 SYNMO15061 1565 aa-0.92□□□□□ -2.56
NEK1-202ENST00000505119 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.93□□□□□ -2.56
NEK1-202ENST00000505119 TENM2Q9NT68 2774 aa-0.93□□□□□ -2.56
NEK1-202ENST00000505119 SPTBN2O15020 2390 aa-0.93□□□□□ -2.56
NEK1-202ENST00000505119 IFNA21P01568 189 aa-0.93□□□□□ -2.56
NEK1-202ENST00000505119 APOC1P02654 83 aa-0.93□□□□□ -2.56
NEK1-202ENST00000505119 THEM6Q8WUY1 208 aa-0.93□□□□□ -2.56
NEK1-202ENST00000505119 CCDC32Q9BV29 185 aa-0.93□□□□□ -2.56
NEK1-202ENST00000505119 GID8Q9NWU2 228 aa-0.93□□□□□ -2.56
NEK1-202ENST00000505119 PKDREJQ9NTG1 2253 aa-0.93□□□□□ -2.56
NEK1-202ENST00000505119 ZNF142P52746 1687 aaPredicted RBP-0.94□□□□□ -2.56
NEK1-202ENST00000505119 NF1P21359 2839 aa-0.94□□□□□ -2.56
NEK1-202ENST00000505119 FAT1Q14517 4588 aa-0.94□□□□□ -2.56
NEK1-202ENST00000505119 UQCRQO14949 82 aa-0.94□□□□□ -2.56
NEK1-202ENST00000505119 SLC25A26Q70HW3 274 aa-0.94□□□□□ -2.56
NEK1-202ENST00000505119 MNS1Q8NEH6 495 aa-0.94□□□□□ -2.56
NEK1-202ENST00000505119 VPS25Q9BRG1 176 aa-0.94□□□□□ -2.56
NEK1-202ENST00000505119 CYP4F30PQ9H0H9 118 aa-0.94□□□□□ -2.56
NEK1-202ENST00000505119 NDUFAF1Q9Y375 327 aa-0.94□□□□□ -2.56
NEK1-202ENST00000505119 HERC2O95714 4834 aa-0.94□□□□□ -2.56
NEK1-202ENST00000505119 A2MP01023 1474 aa-0.94□□□□□ -2.56
NEK1-202ENST00000505119 E2F6O75461 281 aa-0.95□□□□□ -2.56
NEK1-202ENST00000505119 APODP05090 189 aa-0.95□□□□□ -2.56
NEK1-202ENST00000505119 PCBD1P61457 104 aa-0.95□□□□□ -2.56
NEK1-202ENST00000505119 Q6ZRX8 168 aa-0.95□□□□□ -2.56
NEK1-202ENST00000505119 CHD6Q8TD26 2715 aa-0.95□□□□□ -2.56
NEK1-202ENST00000505119 PHIPQ8WWQ0 1821 aa-0.96□□□□□ -2.56
NEK1-202ENST00000505119 ARHGAP31Q2M1Z3 1444 aa-0.96□□□□□ -2.56
NEK1-202ENST00000505119 HECTD4Q9Y4D8 3996 aa-0.96□□□□□ -2.56
NEK1-202ENST00000505119 RBAKDNA6NC62 111 aa-0.96□□□□□ -2.56
NEK1-202ENST00000505119 TCRAP04437 139 aa-0.96□□□□□ -2.56
NEK1-202ENST00000505119 SLC25A6P12236 298 aa-0.96□□□□□ -2.56
NEK1-202ENST00000505119 CCL3L1P16619 93 aa-0.96□□□□□ -2.56
NEK1-202ENST00000505119 AKR1D1P51857 326 aa-0.96□□□□□ -2.56
NEK1-202ENST00000505119 SSBP3-AS1Q7Z2R9 100 aa-0.96□□□□□ -2.56
NEK1-202ENST00000505119 PPDPFLQ8WWR9 84 aa-0.96□□□□□ -2.56
NEK1-202ENST00000505119 METTL1Q9UBP6 276 aaKnown RBP-0.96□□□□□ -2.56
NEK1-202ENST00000505119 BSNQ9UPA5 3926 aa-0.96□□□□□ -2.56
NEK1-202ENST00000505119 MYH9P35579 1960 aaKnown RBP-0.96□□□□□ -2.56
NEK1-202ENST00000505119 LAMA5O15230 3695 aa-0.96□□□□□ -2.56
NEK1-202ENST00000505119 BIVM-ERCC5R4GMW8 1640 aa-0.97□□□□□ -2.56
NEK1-202ENST00000505119 COX4I1P13073 169 aa-0.97□□□□□ -2.56
NEK1-202ENST00000505119 NPC2P61916 151 aa-0.97□□□□□ -2.56
NEK1-202ENST00000505119 HSD17B12Q53GQ0 312 aa-0.97□□□□□ -2.56
NEK1-202ENST00000505119 IFI27L1Q96BM0 104 aa-0.97□□□□□ -2.56
NEK1-202ENST00000505119 TMEM242Q9NWH2 141 aa-0.97□□□□□ -2.56
NEK1-202ENST00000505119 ALMS1Q8TCU4 4167 aa-0.97□□□□□ -2.56
NEK1-202ENST00000505119 NHSL1Q5SYE7 1610 aa-0.97□□□□□ -2.57
NEK1-202ENST00000505119 PTPRMP28827 1452 aa-0.98□□□□□ -2.57
NEK1-202ENST00000505119 C2CD3Q4AC94 2353 aa-0.98□□□□□ -2.57
NEK1-202ENST00000505119 XIRP1Q702N8 1843 aaKnown RBP-0.98□□□□□ -2.57
NEK1-202ENST00000505119 TRBV7-1A0A0A6YYK4 115 aa-0.98□□□□□ -2.57
NEK1-202ENST00000505119 PNMA8CA0A1B0GUJ8 204 aa-0.98□□□□□ -2.57
NEK1-202ENST00000505119 TCRBV3S1A0A5B6 114 aa-0.98□□□□□ -2.57
NEK1-202ENST00000505119 ZNF815PA8K554 130 aa-0.98□□□□□ -2.57
NEK1-202ENST00000505119 MRPS15P82914 257 aaKnown RBP-0.98□□□□□ -2.57
NEK1-202ENST00000505119 PLGLB1Q02325 96 aa-0.98□□□□□ -2.57
NEK1-202ENST00000505119 OR8B8Q15620 311 aa-0.98□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms