RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 DEFB4AO15263 64 aa5.55□□□□□ -1.52
SYNPO2-205ENST00000504178 Q8N7P7 452 aa5.55□□□□□ -1.52
SYNPO2-205ENST00000504178 CABIN1Q9Y6J0 2220 aa5.55□□□□□ -1.52
SYNPO2-205ENST00000504178 CLPSL1A2RUU4 121 aa5.55□□□□□ -1.52
SYNPO2-205ENST00000504178 CFC1BP0CG36 223 aa5.55□□□□□ -1.52
SYNPO2-205ENST00000504178 CFC1P0CG37 223 aa5.55□□□□□ -1.52
SYNPO2-205ENST00000504178 DEFB135Q30KP9 77 aa5.55□□□□□ -1.52
SYNPO2-205ENST00000504178 ANKRD29Q8N6D5 301 aa5.55□□□□□ -1.52
SYNPO2-205ENST00000504178 CENPFP49454 3210 aa5.55□□□□□ -1.52
SYNPO2-205ENST00000504178 C9orf47Q6ZRZ4 202 aa5.55□□□□□ -1.52
SYNPO2-205ENST00000504178 Q8N1Y9 231 aa5.55□□□□□ -1.52
SYNPO2-205ENST00000504178 ZNF747Q9BV97 191 aa5.55□□□□□ -1.52
SYNPO2-205ENST00000504178 FER1L5A0AVI2 2057 aa5.54□□□□□ -1.52
SYNPO2-205ENST00000504178 IGHV4-28A0A0C4DH34 117 aa5.54□□□□□ -1.52
SYNPO2-205ENST00000504178 TMEM89A2RUT3 159 aa5.54□□□□□ -1.52
SYNPO2-205ENST00000504178 TEX22C9J3V5 150 aa5.54□□□□□ -1.52
SYNPO2-205ENST00000504178 RNF138Q8WVD3 245 aa5.54□□□□□ -1.52
SYNPO2-205ENST00000504178 TIMM17AQ99595 171 aa5.54□□□□□ -1.52
SYNPO2-205ENST00000504178 DNAJC9-AS1A6NH13 148 aa5.54□□□□□ -1.52
SYNPO2-205ENST00000504178 H3BMG7 143 aa5.54□□□□□ -1.52
SYNPO2-205ENST00000504178 K7EMT4 169 aa5.54□□□□□ -1.52
SYNPO2-205ENST00000504178 SEM1Q6ZVN7 128 aa5.54□□□□□ -1.52
SYNPO2-205ENST00000504178 TM2D2Q9BX73 214 aa5.54□□□□□ -1.52
SYNPO2-205ENST00000504178 SIRPDQ9H106 197 aa5.54□□□□□ -1.52
SYNPO2-205ENST00000504178 DOCK9Q9BZ29 2069 aa5.54□□□□□ -1.52
SYNPO2-205ENST00000504178 NDUFA1O15239 70 aa5.54□□□□□ -1.52
SYNPO2-205ENST00000504178 HIST2H2BCQ6DN03 193 aa5.54□□□□□ -1.52
SYNPO2-205ENST00000504178 SMAD5-AS1Q9Y6J3 95 aa5.54□□□□□ -1.52
SYNPO2-205ENST00000504178 PHF3Q92576 2039 aaKnown RBP5.54□□□□□ -1.52
SYNPO2-205ENST00000504178 FUSP35637 526 aaKnown RBP eCLIP5.54□□□□□ -1.52
SYNPO2-205ENST00000504178 PATE2Q6UY27 113 aa5.53□□□□□ -1.52
SYNPO2-205ENST00000504178 PRORYQ9H606 182 aa5.53□□□□□ -1.52
SYNPO2-205ENST00000504178 PRAC2D3DTV9 90 aa5.53□□□□□ -1.52
SYNPO2-205ENST00000504178 PLXNB3Q9ULL4 1909 aa5.53□□□□□ -1.52
SYNPO2-205ENST00000504178 TRBV7-3A0A075B6L6 115 aa5.53□□□□□ -1.52
SYNPO2-205ENST00000504178 A0A1W2PNU3 283 aaPredicted RBP5.53□□□□□ -1.52
SYNPO2-205ENST00000504178 K7EP13 123 aa5.53□□□□□ -1.52
SYNPO2-205ENST00000504178 SND1-IT1Q9HBX3 110 aa5.53□□□□□ -1.52
SYNPO2-205ENST00000504178 IGLL5B9A064 214 aa5.53□□□□□ -1.52
SYNPO2-205ENST00000504178 RS1O15537 224 aa5.53□□□□□ -1.52
SYNPO2-205ENST00000504178 LINC01545Q5VT33 79 aa5.53□□□□□ -1.52
SYNPO2-205ENST00000504178 GPHB5Q86YW7 130 aa5.53□□□□□ -1.52
SYNPO2-205ENST00000504178 NTN5Q8WTR8 489 aaPredicted RBP5.53□□□□□ -1.52
SYNPO2-205ENST00000504178 SEC16AO15027 2179 aa5.53□□□□□ -1.52
SYNPO2-205ENST00000504178 A6NDX4 124 aa5.53□□□□□ -1.52
SYNPO2-205ENST00000504178 MUSTN1Q8IVN3 82 aa5.53□□□□□ -1.52
SYNPO2-205ENST00000504178 BRWD1Q9NSI6 2320 aa5.53□□□□□ -1.52
SYNPO2-205ENST00000504178 CRYBA4P53673 196 aa5.53□□□□□ -1.52
SYNPO2-205ENST00000504178 ETDBQ3ZM63 59 aa5.53□□□□□ -1.52
SYNPO2-205ENST00000504178 PCP2Q8IVA1 136 aa5.53□□□□□ -1.52
SYNPO2-205ENST00000504178 CHKB-CPT1BH3BT56 60 aa5.52□□□□□ -1.53
SYNPO2-205ENST00000504178 IL15RAQ13261 267 aa5.52□□□□□ -1.53
SYNPO2-205ENST00000504178 Q6ZSR3 168 aa5.52□□□□□ -1.53
SYNPO2-205ENST00000504178 ODF3L1Q8IXM7 274 aa5.52□□□□□ -1.53
SYNPO2-205ENST00000504178 TOMM6Q96B49 74 aa5.52□□□□□ -1.53
SYNPO2-205ENST00000504178 FANCD2OSQ96PS1 177 aa5.52□□□□□ -1.53
SYNPO2-205ENST00000504178 CACNA1IQ9P0X4 2223 aa5.52□□□□□ -1.53
SYNPO2-205ENST00000504178 IGKV1-17P01599 117 aa5.52□□□□□ -1.53
SYNPO2-205ENST00000504178 IGHG2P01859 326 aa5.52□□□□□ -1.53
SYNPO2-205ENST00000504178 NDUFA11Q86Y39 141 aa5.52□□□□□ -1.53
SYNPO2-205ENST00000504178 MSRB1Q9NZV6 116 aa5.52□□□□□ -1.53
SYNPO2-205ENST00000504178 SNRNP200O75643 2136 aaKnown RBP5.52□□□□□ -1.53
SYNPO2-205ENST00000504178 MED14OSP0DP75 135 aa5.52□□□□□ -1.53
SYNPO2-205ENST00000504178 A0A0J9YXV3 536 aa5.51□□□□□ -1.53
SYNPO2-205ENST00000504178 TRBV12-3P01733 135 aa5.51□□□□□ -1.53
SYNPO2-205ENST00000504178 BAALCQ8WXS3 180 aa5.51□□□□□ -1.53
SYNPO2-205ENST00000504178 RP1P56715 2156 aa5.51□□□□□ -1.53
SYNPO2-205ENST00000504178 H3BQ85 93 aa5.51□□□□□ -1.53
SYNPO2-205ENST00000504178 RPL39P62891 51 aaKnown RBP5.51□□□□□ -1.53
SYNPO2-205ENST00000504178 VSIG2Q96IQ7 327 aa5.51□□□□□ -1.53
SYNPO2-205ENST00000504178 DEFB125Q8N687 156 aa5.51□□□□□ -1.53
SYNPO2-205ENST00000504178 LYPD6BQ8NI32 183 aa5.51□□□□□ -1.53
SYNPO2-205ENST00000504178 NDUFB1O75438 58 aa5.51□□□□□ -1.53
SYNPO2-205ENST00000504178 C4orf48Q5BLP8 95 aa5.51□□□□□ -1.53
SYNPO2-205ENST00000504178 MAP6D1Q9H9H5 199 aa5.51□□□□□ -1.53
SYNPO2-205ENST00000504178 INSL3P51460 131 aa5.51□□□□□ -1.53
SYNPO2-205ENST00000504178 LRRC75A-AS1Q8N1F1 130 aa5.51□□□□□ -1.53
SYNPO2-205ENST00000504178 TMEM263Q8WUH6 116 aaKnown RBP5.51□□□□□ -1.53
SYNPO2-205ENST00000504178 ASXL3Q9C0F0 2248 aa5.5□□□□□ -1.53
SYNPO2-205ENST00000504178 CXCL5P42830 114 aa5.5□□□□□ -1.53
SYNPO2-205ENST00000504178 DAND5Q8N907 189 aa5.5□□□□□ -1.53
SYNPO2-205ENST00000504178 IL17DQ8TAD2 202 aa5.5□□□□□ -1.53
SYNPO2-205ENST00000504178 DENND4CQ5VZ89 1909 aa5.5□□□□□ -1.53
SYNPO2-205ENST00000504178 GAGE12HA6NDE8 117 aa5.5□□□□□ -1.53
SYNPO2-205ENST00000504178 H0YGX0 51 aa5.5□□□□□ -1.53
SYNPO2-205ENST00000504178 PROP1O75360 226 aa5.5□□□□□ -1.53
SYNPO2-205ENST00000504178 NPSP0C0P6 89 aa5.5□□□□□ -1.53
SYNPO2-205ENST00000504178 MYO7BQ6PIF6 2116 aa5.5□□□□□ -1.53
SYNPO2-205ENST00000504178 DEFB1P60022 68 aa5.5□□□□□ -1.53
SYNPO2-205ENST00000504178 Q8NA96 180 aa5.5□□□□□ -1.53
SYNPO2-205ENST00000504178 LOXL1Q08397 574 aaPredicted RBP5.5□□□□□ -1.53
SYNPO2-205ENST00000504178 SPAG11BQ08648 103 aa5.5□□□□□ -1.53
SYNPO2-205ENST00000504178 OPRPNQ99935 248 aaPredicted RBP5.5□□□□□ -1.53
SYNPO2-205ENST00000504178 KLK12Q9UKR0 248 aa5.5□□□□□ -1.53
SYNPO2-205ENST00000504178 HEATR1Q9H583 2144 aaKnown RBP5.5□□□□□ -1.53
SYNPO2-205ENST00000504178 IGLV2-14P01704 120 aa5.49□□□□□ -1.53
SYNPO2-205ENST00000504178 IGHV4-31P0DP07 118 aa5.49□□□□□ -1.53
SYNPO2-205ENST00000504178 UNQ9165/PRO28630Q6UXU0 137 aa5.49□□□□□ -1.53
SYNPO2-205ENST00000504178 SPRY4Q9C004 299 aa5.49□□□□□ -1.53
SYNPO2-205ENST00000504178 TMEM131Q92545 1883 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms