RNA–Protein interactions for RNA: ENST00000504091.1

SH3TC2-204, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 4,522 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-204ENST00000504091 SEC61GP60059 68 aa5.4□□□□□ -1.55
SH3TC2-204ENST00000504091 ERCC8Q13216 396 aa5.4□□□□□ -1.55
SH3TC2-204ENST00000504091 IGHV3OR16-13A0A075B7E8 117 aa5.4□□□□□ -1.55
SH3TC2-204ENST00000504091 IGHV3-74A0A0B4J1X5 117 aa5.4□□□□□ -1.55
SH3TC2-204ENST00000504091 CEACAM4O75871 244 aa5.4□□□□□ -1.55
SH3TC2-204ENST00000504091 GAS8-AS1O95177 125 aa5.4□□□□□ -1.55
SH3TC2-204ENST00000504091 WNK1Q9H4A3 2382 aa5.4□□□□□ -1.55
SH3TC2-204ENST00000504091 TRAV8-3A0A0A6YYJ7 113 aa5.39□□□□□ -1.55
SH3TC2-204ENST00000504091 UBE2D3P61077 147 aa5.39□□□□□ -1.55
SH3TC2-204ENST00000504091 UBE2D2P62837 147 aa5.39□□□□□ -1.55
SH3TC2-204ENST00000504091 SLC50A1Q9BRV3 221 aa5.39□□□□□ -1.55
SH3TC2-204ENST00000504091 C21orf62Q9NYP8 219 aa5.39□□□□□ -1.55
SH3TC2-204ENST00000504091 X6R8D5 127 aa5.39□□□□□ -1.55
SH3TC2-204ENST00000504091 DOPEY2Q9Y3R5 2298 aa5.39□□□□□ -1.55
SH3TC2-204ENST00000504091 TRAV12-3A0A0B4J271 114 aa5.39□□□□□ -1.55
SH3TC2-204ENST00000504091 M0R2P5 195 aa5.39□□□□□ -1.55
SH3TC2-204ENST00000504091 NPFFO15130 113 aa5.39□□□□□ -1.55
SH3TC2-204ENST00000504091 TMEM200BQ69YZ2 307 aa5.39□□□□□ -1.55
SH3TC2-204ENST00000504091 ZNF491Q8N8L2 437 aa5.39□□□□□ -1.55
SH3TC2-204ENST00000504091 FSTL3O95633 263 aa5.39□□□□□ -1.55
SH3TC2-204ENST00000504091 IGKV1-17P01599 117 aa5.39□□□□□ -1.55
SH3TC2-204ENST00000504091 NHLRC4P0CG21 123 aaPredicted RBP5.39□□□□□ -1.55
SH3TC2-204ENST00000504091 CGB3P0DN86 165 aa5.39□□□□□ -1.55
SH3TC2-204ENST00000504091 CGB7P0DN87 165 aa5.39□□□□□ -1.55
SH3TC2-204ENST00000504091 PRB3Q04118 309 aaPredicted RBP5.39□□□□□ -1.55
SH3TC2-204ENST00000504091 RNF185Q96GF1 192 aa5.39□□□□□ -1.55
SH3TC2-204ENST00000504091 DUX3Q96PT4 197 aa5.39□□□□□ -1.55
SH3TC2-204ENST00000504091 J3QQQ9 107 aa5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 TRGV3P03979 118 aa5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 CNTFRP26992 372 aa5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 UBE2D1P51668 147 aa5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 PRR30Q53SZ7 412 aaPredicted RBP5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 SPRR3Q9UBC9 169 aa5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 TRGV11A0A075B6L2 103 aa5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 IGHV3-66A0A0C4DH42 116 aa5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 TRBV10-2A0A0K0K1G8 114 aa5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 LINC00694P0DN24 101 aa5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 CCL11P51671 97 aa5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 C14orf178Q8N769 122 aaPredicted RBP5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 DNAJC30Q96LL9 226 aa5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 SPANXDQ9BXN6 97 aa5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 SZT2Q5T011 3432 aa5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 LINC01548A6NM66 108 aa5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 DUSP14O95147 198 aaKnown RBP5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 IGLC6P0CF74 106 aa5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 ZNF883P0CG24 379 aa5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 A0A0A0MQY5 61 aa5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 TIMM23O14925 209 aa5.38□□□□□ -1.55
SH3TC2-204ENST00000504091 JMJD1CQ15652 2540 aa5.37□□□□□ -1.55
SH3TC2-204ENST00000504091 CCL24O00175 119 aa5.37□□□□□ -1.55
SH3TC2-204ENST00000504091 ZNF80P51504 273 aaPredicted RBP5.37□□□□□ -1.55
SH3TC2-204ENST00000504091 IGHG4P01861 327 aa5.37□□□□□ -1.55
SH3TC2-204ENST00000504091 SPRNQ5BIV9 151 aa5.37□□□□□ -1.55
SH3TC2-204ENST00000504091 PMS2CLQ68D20 193 aa5.37□□□□□ -1.55
SH3TC2-204ENST00000504091 STHQ8IWL8 128 aa5.37□□□□□ -1.55
SH3TC2-204ENST00000504091 BAALCQ8WXS3 180 aa5.37□□□□□ -1.55
SH3TC2-204ENST00000504091 DPH3P1Q9H4G8 78 aa5.37□□□□□ -1.55
SH3TC2-204ENST00000504091 TP53TG1Q9Y2A0 90 aa5.37□□□□□ -1.55
SH3TC2-204ENST00000504091 CSDC2Q9Y534 153 aaKnown RBP5.37□□□□□ -1.55
SH3TC2-204ENST00000504091 ZFYVE26Q68DK2 2539 aa5.37□□□□□ -1.55
SH3TC2-204ENST00000504091 IGHV3-49A0A0A0MS15 119 aa5.37□□□□□ -1.55
SH3TC2-204ENST00000504091 A0A0J9YY99 117 aa5.37□□□□□ -1.55
SH3TC2-204ENST00000504091 IGHV1-46P01743 117 aa5.37□□□□□ -1.55
SH3TC2-204ENST00000504091 HERVK_113P63121 156 aa5.37□□□□□ -1.55
SH3TC2-204ENST00000504091 PIP4P1Q86T03 277 aa5.37□□□□□ -1.55
SH3TC2-204ENST00000504091 SMIM9A6NGZ8 99 aa5.36□□□□□ -1.55
SH3TC2-204ENST00000504091 TRACP01848 142 aa5.36□□□□□ -1.55
SH3TC2-204ENST00000504091 MALRD1Q5VYJ5 2156 aa5.36□□□□□ -1.55
SH3TC2-204ENST00000504091 RITA1Q96K30 269 aa5.36□□□□□ -1.55
SH3TC2-204ENST00000504091 MRPS12O15235 138 aaKnown RBP5.36□□□□□ -1.55
SH3TC2-204ENST00000504091 NDUFA7O95182 113 aa5.36□□□□□ -1.55
SH3TC2-204ENST00000504091 CRIP2P52943 208 aaPredicted RBP5.36□□□□□ -1.55
SH3TC2-204ENST00000504091 NPC2P61916 151 aa5.36□□□□□ -1.55
SH3TC2-204ENST00000504091 SPANXCQ9NY87 97 aa5.36□□□□□ -1.55
SH3TC2-204ENST00000504091 C11orf86A6NJI1 115 aa5.36□□□□□ -1.55
SH3TC2-204ENST00000504091 LGALS9O00182 355 aa5.36□□□□□ -1.55
SH3TC2-204ENST00000504091 UQCRQO14949 82 aa5.36□□□□□ -1.55
SH3TC2-204ENST00000504091 RUSC1-AS1Q66K80 236 aa5.36□□□□□ -1.55
SH3TC2-204ENST00000504091 C9orf106Q8NAJ2 232 aa5.36□□□□□ -1.55
SH3TC2-204ENST00000504091 NRGNQ92686 78 aa5.36□□□□□ -1.55
SH3TC2-204ENST00000504091 TOMM6Q96B49 74 aa5.36□□□□□ -1.55
SH3TC2-204ENST00000504091 IGLV2-23P01705 113 aa5.36□□□□□ -1.55
SH3TC2-204ENST00000504091 MUSTN1Q8IVN3 82 aa5.36□□□□□ -1.55
SH3TC2-204ENST00000504091 VCYO14598 125 aa5.35□□□□□ -1.55
SH3TC2-204ENST00000504091 FAM74A4Q5TZK3 123 aa5.35□□□□□ -1.55
SH3TC2-204ENST00000504091 GFRALQ6UXV0 394 aa5.35□□□□□ -1.55
SH3TC2-204ENST00000504091 DYNAPQ8N1N2 210 aa5.35□□□□□ -1.55
SH3TC2-204ENST00000504091 C3orf22Q8N5N4 141 aa5.35□□□□□ -1.55
SH3TC2-204ENST00000504091 RNF182Q8N6D2 247 aa5.35□□□□□ -1.55
SH3TC2-204ENST00000504091 NEXN-AS1Q8NBZ9 246 aa5.35□□□□□ -1.55
SH3TC2-204ENST00000504091 OOSP1A8MZH6 123 aa5.35□□□□□ -1.55
SH3TC2-204ENST00000504091 I3L2K1 104 aa5.35□□□□□ -1.55
SH3TC2-204ENST00000504091 HOXB4P17483 251 aaPredicted RBP5.35□□□□□ -1.55
SH3TC2-204ENST00000504091 DEFB109BQ30KR1 87 aa5.35□□□□□ -1.55
SH3TC2-204ENST00000504091 SLC25A29Q8N8R3 303 aa5.35□□□□□ -1.55
SH3TC2-204ENST00000504091 LINC00527Q9UJ94 153 aa5.35□□□□□ -1.55
SH3TC2-204ENST00000504091 CSPG4Q6UVK1 2322 aa5.35□□□□□ -1.55
SH3TC2-204ENST00000504091 IGHV1-3A0A0C4DH29 117 aa5.35□□□□□ -1.55
SH3TC2-204ENST00000504091 LOC107984640A0A0U1RRK4 108 aa5.35□□□□□ -1.55
SH3TC2-204ENST00000504091 LHBP01229 141 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms