RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 LINC01545Q5VT33 79 aa12.61□□□□□ -0.39
HMGXB3-202ENST00000503427 F6UB75 175 aa12.61□□□□□ -0.39
HMGXB3-202ENST00000503427 C11orf1Q9H5F2 150 aa12.61□□□□□ -0.39
HMGXB3-202ENST00000503427 IGHV7-81A0A0B4J1V7 117 aa12.6□□□□□ -0.39
HMGXB3-202ENST00000503427 KMT2EQ8IZD2 1858 aa12.6□□□□□ -0.39
HMGXB3-202ENST00000503427 DAD1P61803 113 aa12.6□□□□□ -0.39
HMGXB3-202ENST00000503427 UBE2DNLQ8IWF7 75 aa12.6□□□□□ -0.39
HMGXB3-202ENST00000503427 SPG11Q96JI7 2443 aa12.59□□□□□ -0.39
HMGXB3-202ENST00000503427 PCDH15Q96QU1 1955 aa12.59□□□□□ -0.39
HMGXB3-202ENST00000503427 GAGE6Q13070 117 aa12.59□□□□□ -0.39
HMGXB3-202ENST00000503427 AMTNQ6UX39 209 aa12.59□□□□□ -0.39
HMGXB3-202ENST00000503427 WISP2O76076 250 aa12.59□□□□□ -0.39
HMGXB3-202ENST00000503427 TRAV13-2A0A0B4J235 113 aa12.59□□□□□ -0.39
HMGXB3-202ENST00000503427 RITA1Q96K30 269 aa12.59□□□□□ -0.39
HMGXB3-202ENST00000503427 CTSGP08311 255 aa12.58□□□□□ -0.4
HMGXB3-202ENST00000503427 GATA1P15976 413 aaPredicted RBP12.58□□□□□ -0.4
HMGXB3-202ENST00000503427 IGFBPL1Q8WX77 278 aa12.58□□□□□ -0.4
HMGXB3-202ENST00000503427 NCOA6Q14686 2063 aaPredicted RBP12.58□□□□□ -0.4
HMGXB3-202ENST00000503427 IGLV1-47P01700 117 aa12.58□□□□□ -0.4
HMGXB3-202ENST00000503427 F5H768 121 aa12.58□□□□□ -0.4
HMGXB3-202ENST00000503427 ZNF561-AS1K7EIQ3 104 aa12.58□□□□□ -0.4
HMGXB3-202ENST00000503427 C9orf153Q5TBE3 101 aa12.57□□□□□ -0.4
HMGXB3-202ENST00000503427 CARD19Q96LW7 228 aa12.57□□□□□ -0.4
HMGXB3-202ENST00000503427 IGHV4-38-2P0DP08 117 aa12.57□□□□□ -0.4
HMGXB3-202ENST00000503427 MSMPQ1L6U9 139 aa12.57□□□□□ -0.4
HMGXB3-202ENST00000503427 TDRG1Q3Y452 100 aa12.57□□□□□ -0.4
HMGXB3-202ENST00000503427 CFC1BP0CG36 223 aa12.57□□□□□ -0.4
HMGXB3-202ENST00000503427 CFC1P0CG37 223 aa12.57□□□□□ -0.4
HMGXB3-202ENST00000503427 LINC00173Q6ZV60 143 aa12.56□□□□□ -0.4
HMGXB3-202ENST00000503427 Q6ZVH6 145 aa12.56□□□□□ -0.4
HMGXB3-202ENST00000503427 GTSF1Q8WW33 167 aa12.56□□□□□ -0.4
HMGXB3-202ENST00000503427 SCRT2Q9NQ03 307 aa12.56□□□□□ -0.4
HMGXB3-202ENST00000503427 IGKV1OR2-108A0A075B7D4 117 aa12.56□□□□□ -0.4
HMGXB3-202ENST00000503427 CCL25O15444 150 aa12.56□□□□□ -0.4
HMGXB3-202ENST00000503427 BUB3O43684 328 aa12.56□□□□□ -0.4
HMGXB3-202ENST00000503427 IGLV2-23P01705 113 aa12.56□□□□□ -0.4
HMGXB3-202ENST00000503427 APOC4P55056 127 aa12.56□□□□□ -0.4
HMGXB3-202ENST00000503427 C10orf142B7Z368 130 aa12.55□□□□□ -0.4
HMGXB3-202ENST00000503427 HOXD3P31249 432 aaPredicted RBP12.55□□□□□ -0.4
HMGXB3-202ENST00000503427 ANKRD39Q53RE8 183 aa12.55□□□□□ -0.4
HMGXB3-202ENST00000503427 WI2-2373I1.2A0A1W2PRP0 233 aa12.55□□□□□ -0.4
HMGXB3-202ENST00000503427 ODF3L1Q8IXM7 274 aa12.55□□□□□ -0.4
HMGXB3-202ENST00000503427 Q8N9W7 124 aa12.55□□□□□ -0.4
HMGXB3-202ENST00000503427 UBL5Q9BZL1 73 aa12.55□□□□□ -0.4
HMGXB3-202ENST00000503427 NCKAP5O14513 1909 aa12.54□□□□□ -0.4
HMGXB3-202ENST00000503427 MSRB1Q9NZV6 116 aa12.54□□□□□ -0.4
HMGXB3-202ENST00000503427 MUC22E2RYF6 1773 aaPredicted RBP12.54□□□□□ -0.4
HMGXB3-202ENST00000503427 PSCAO43653 123 aa12.54□□□□□ -0.4
HMGXB3-202ENST00000503427 RNASE13Q5GAN3 156 aaKnown RBP12.54□□□□□ -0.4
HMGXB3-202ENST00000503427 NXPH4O95158 308 aa12.54□□□□□ -0.4
HMGXB3-202ENST00000503427 TEX22C9J3V5 150 aa12.53□□□□□ -0.4
HMGXB3-202ENST00000503427 IFITM1P13164 125 aa12.53□□□□□ -0.4
HMGXB3-202ENST00000503427 CRYGCP07315 174 aa12.53□□□□□ -0.4
HMGXB3-202ENST00000503427 C16orf54Q6UWD8 224 aa12.53□□□□□ -0.4
HMGXB3-202ENST00000503427 Q8N7P7 452 aa12.53□□□□□ -0.4
HMGXB3-202ENST00000503427 NTN5Q8WTR8 489 aaPredicted RBP12.53□□□□□ -0.4
HMGXB3-202ENST00000503427 RPL39LQ96EH5 51 aaKnown RBP12.53□□□□□ -0.4
HMGXB3-202ENST00000503427 C5orf56Q8N8D9 126 aa12.52□□□□□ -0.4
HMGXB3-202ENST00000503427 PRORYQ9H606 182 aa12.52□□□□□ -0.4
HMGXB3-202ENST00000503427 TRBV6-1A0A0K0K1D8 114 aa12.52□□□□□ -0.41
HMGXB3-202ENST00000503427 U3KQE9 123 aa12.52□□□□□ -0.41
HMGXB3-202ENST00000503427 IGLL5B9A064 214 aa12.52□□□□□ -0.41
HMGXB3-202ENST00000503427 P0C879 139 aa12.52□□□□□ -0.41
HMGXB3-202ENST00000503427 SUMO4Q6EEV6 95 aa12.52□□□□□ -0.41
HMGXB3-202ENST00000503427 ZFP36P26651 326 aaKnown RBP12.51□□□□□ -0.41
HMGXB3-202ENST00000503427 CCL24O00175 119 aa12.51□□□□□ -0.41
HMGXB3-202ENST00000503427 BLCAPP62952 87 aa12.51□□□□□ -0.41
HMGXB3-202ENST00000503427 PRSS47A8MTI9 375 aa12.51□□□□□ -0.41
HMGXB3-202ENST00000503427 SPRY2O43597 315 aa12.5□□□□□ -0.41
HMGXB3-202ENST00000503427 CDK2AP2O75956 126 aa12.5□□□□□ -0.41
HMGXB3-202ENST00000503427 ZFP2Q6ZN57 461 aa12.5□□□□□ -0.41
HMGXB3-202ENST00000503427 AJUBAQ96IF1 538 aa12.5□□□□□ -0.41
HMGXB3-202ENST00000503427 SIRPDQ9H106 197 aa12.5□□□□□ -0.41
HMGXB3-202ENST00000503427 IGHG4P01861 327 aa12.5□□□□□ -0.41
HMGXB3-202ENST00000503427 RNF152Q8N8N0 203 aa12.5□□□□□ -0.41
HMGXB3-202ENST00000503427 MRPL36Q9P0J6 103 aaKnown RBP12.5□□□□□ -0.41
HMGXB3-202ENST00000503427 HIGD1BQ9P298 99 aa12.5□□□□□ -0.41
HMGXB3-202ENST00000503427 MYO18BQ8IUG5 2567 aa12.49□□□□□ -0.41
HMGXB3-202ENST00000503427 E7EUB6 86 aa12.49□□□□□ -0.41
HMGXB3-202ENST00000503427 CTRLP40313 264 aa12.49□□□□□ -0.41
HMGXB3-202ENST00000503427 Q9H8V8 135 aa12.49□□□□□ -0.41
HMGXB3-202ENST00000503427 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.49□□□□□ -0.41
HMGXB3-202ENST00000503427 IGKV2-29A2NJV5 120 aaPredicted RBP12.49□□□□□ -0.41
HMGXB3-202ENST00000503427 C9orf47Q6ZRZ4 202 aa12.49□□□□□ -0.41
HMGXB3-202ENST00000503427 HERV-K104P63124 156 aa12.49□□□□□ -0.41
HMGXB3-202ENST00000503427 IGF2RP11717 2491 aa12.49□□□□□ -0.41
HMGXB3-202ENST00000503427 TRAV12-1A0A0B4J245 112 aa12.49□□□□□ -0.41
HMGXB3-202ENST00000503427 CRLF1O75462 422 aa12.49□□□□□ -0.41
HMGXB3-202ENST00000503427 NKAPP1Q8N9T2 125 aa12.49□□□□□ -0.41
HMGXB3-202ENST00000503427 LINC00574Q9H8X3 128 aa12.49□□□□□ -0.41
HMGXB3-202ENST00000503427 RPL32P62910 135 aaKnown RBP12.48□□□□□ -0.41
HMGXB3-202ENST00000503427 SLC25A29Q8N8R3 303 aa12.48□□□□□ -0.41
HMGXB3-202ENST00000503427 NOP10Q9NPE3 64 aaKnown RBP12.48□□□□□ -0.41
HMGXB3-202ENST00000503427 CHD8Q9HCK8 2581 aa12.48□□□□□ -0.41
HMGXB3-202ENST00000503427 TMEM89A2RUT3 159 aa12.47□□□□□ -0.41
HMGXB3-202ENST00000503427 ANKRD29Q8N6D5 301 aa12.47□□□□□ -0.41
HMGXB3-202ENST00000503427 C19orf71A6NCJ1 209 aa12.47□□□□□ -0.41
HMGXB3-202ENST00000503427 ANGP03950 147 aaKnown RBP12.47□□□□□ -0.41
HMGXB3-202ENST00000503427 PRAC2D3DTV9 90 aa12.47□□□□□ -0.41
HMGXB3-202ENST00000503427 FRMD6-AS1P0C7T7 363 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms