RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 SPXQ9BT56 116 aa5.95□□□□□ -1.46
TOPBP1-202ENST00000503338 XCL2Q9UBD3 114 aa5.95□□□□□ -1.46
TOPBP1-202ENST00000503338 NOTCH3Q9UM47 2321 aa5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 HIST1H2BKO60814 126 aa5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 NXPH4O95158 308 aa5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 PPBPP02775 128 aa5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 HIST1H2BJP06899 126 aa5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 RPL35AP18077 110 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 HIST1H2BOP23527 126 aa5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 HIST1H2BBP33778 126 aa5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 RIPPLY3P57055 190 aa5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 HIST1H2BDP58876 126 aa5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 HIST1H2BCP62807 126 aa5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 HIST2H2BEQ16778 126 aa5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 FAM104BQ5XKR9 115 aa5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 Q6ZQT7 251 aa5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 OR10AG1Q8NH19 301 aa5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 HIST1H2BHQ93079 126 aa5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 AP1S3Q96PC3 154 aa5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 HIST1H2BNQ99877 126 aa5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 HIST1H2BMQ99879 126 aa5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 WFDC10AQ9H1F0 79 aa5.94□□□□□ -1.46
TOPBP1-202ENST00000503338 SMIM9A6NGZ8 99 aa5.93□□□□□ -1.46
TOPBP1-202ENST00000503338 A8MZ25 164 aa5.93□□□□□ -1.46
TOPBP1-202ENST00000503338 M0R2P5 195 aa5.93□□□□□ -1.46
TOPBP1-202ENST00000503338 M0R381 172 aa5.93□□□□□ -1.46
TOPBP1-202ENST00000503338 RBMY1A1P0DJD3 496 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-202ENST00000503338 RBMY1CP0DJD4 496 aa5.93□□□□□ -1.46
TOPBP1-202ENST00000503338 SMIM17P0DL12 118 aa5.93□□□□□ -1.46
TOPBP1-202ENST00000503338 SLAQ13239 276 aa5.93□□□□□ -1.46
TOPBP1-202ENST00000503338 RBMY1FQ15415 496 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-202ENST00000503338 OR10J3Q5JRS4 329 aa5.93□□□□□ -1.46
TOPBP1-202ENST00000503338 C1orf158Q8N1D5 194 aa5.93□□□□□ -1.46
TOPBP1-202ENST00000503338 TMEM263Q8WUH6 116 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-202ENST00000503338 DPH3P1Q9H4G8 78 aa5.93□□□□□ -1.46
TOPBP1-202ENST00000503338 LAMTOR2Q9Y2Q5 125 aa5.93□□□□□ -1.46
TOPBP1-202ENST00000503338 TIMM8BQ9Y5J9 83 aaPredicted RBP5.93□□□□□ -1.46
TOPBP1-202ENST00000503338 PPP1R17O96001 155 aa5.92□□□□□ -1.46
TOPBP1-202ENST00000503338 GIG44P09565 113 aaPredicted RBP5.92□□□□□ -1.46
TOPBP1-202ENST00000503338 FRMD6-AS1P0C7T7 363 aa5.92□□□□□ -1.46
TOPBP1-202ENST00000503338 HTN1P15515 57 aa5.92□□□□□ -1.46
TOPBP1-202ENST00000503338 Q0VG73 95 aa5.92□□□□□ -1.46
TOPBP1-202ENST00000503338 RRN3P1Q2M238 152 aa5.92□□□□□ -1.46
TOPBP1-202ENST00000503338 OXLD1Q5BKU9 147 aa5.92□□□□□ -1.46
TOPBP1-202ENST00000503338 COA6Q5JTJ3 125 aaKnown RBP5.92□□□□□ -1.46
TOPBP1-202ENST00000503338 ZNF705AQ6ZN79 300 aaPredicted RBP5.92□□□□□ -1.46
TOPBP1-202ENST00000503338 ORMDL3Q8N138 153 aa5.92□□□□□ -1.46
TOPBP1-202ENST00000503338 CSNK1G2-AS1Q8NCQ2 148 aa5.92□□□□□ -1.46
TOPBP1-202ENST00000503338 MRAP2Q96G30 205 aa5.92□□□□□ -1.46
TOPBP1-202ENST00000503338 C16orf74Q96GX8 76 aa5.92□□□□□ -1.46
TOPBP1-202ENST00000503338 RCHY1Q96PM5 261 aa5.92□□□□□ -1.46
TOPBP1-202ENST00000503338 MDFICQ9P1T7 246 aa5.92□□□□□ -1.46
TOPBP1-202ENST00000503338 IGHV3OR16-12A0A075B7B8 117 aa5.91□□□□□ -1.46
TOPBP1-202ENST00000503338 MUC21A0A0G2JKD1 596 aa5.91□□□□□ -1.46
TOPBP1-202ENST00000503338 MUC21A0A140T8X8 626 aa5.91□□□□□ -1.46
TOPBP1-202ENST00000503338 A8MWV9 139 aa5.91□□□□□ -1.46
TOPBP1-202ENST00000503338 IGHV4-30-4P0DP06 118 aa5.91□□□□□ -1.46
TOPBP1-202ENST00000503338 RAB4AP20338 218 aa5.91□□□□□ -1.46
TOPBP1-202ENST00000503338 SRIP30626 198 aa5.91□□□□□ -1.46
TOPBP1-202ENST00000503338 NDUFA6P56556 154 aa5.91□□□□□ -1.46
TOPBP1-202ENST00000503338 SSTP61278 116 aa5.91□□□□□ -1.46
TOPBP1-202ENST00000503338 LGALS9BQ3B8N2 356 aa5.91□□□□□ -1.46
TOPBP1-202ENST00000503338 KIAA1644Q3SXP7 199 aa5.91□□□□□ -1.46
TOPBP1-202ENST00000503338 ZNF876PQ49A33 203 aa5.91□□□□□ -1.46
TOPBP1-202ENST00000503338 SAMD5Q5TGI4 173 aa5.91□□□□□ -1.46
TOPBP1-202ENST00000503338 LURAP1LQ8IV03 231 aa5.91□□□□□ -1.46
TOPBP1-202ENST00000503338 AMN1Q8IY45 258 aa5.91□□□□□ -1.46
TOPBP1-202ENST00000503338 RNASE8Q8TDE3 154 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-202ENST00000503338 ALKBH7Q9BT30 221 aaPredicted RBP5.91□□□□□ -1.46
TOPBP1-202ENST00000503338 MSRB1Q9NZV6 116 aa5.91□□□□□ -1.46
TOPBP1-202ENST00000503338 C5orf52A6NGY3 159 aa5.9□□□□□ -1.46
TOPBP1-202ENST00000503338 RHODO00212 210 aa5.9□□□□□ -1.46
TOPBP1-202ENST00000503338 CIDEAO60543 219 aa5.9□□□□□ -1.46
TOPBP1-202ENST00000503338 EVI2AP22794 236 aa5.9□□□□□ -1.46
TOPBP1-202ENST00000503338 CKS2P33552 79 aa5.9□□□□□ -1.46
TOPBP1-202ENST00000503338 DAZ2Q13117 558 aaKnown RBP5.9□□□□□ -1.46
TOPBP1-202ENST00000503338 Q6ZWC4 215 aa5.9□□□□□ -1.46
TOPBP1-202ENST00000503338 BAGE3Q86Y29 109 aa5.9□□□□□ -1.46
TOPBP1-202ENST00000503338 C11orf72Q8NBR9 251 aa5.9□□□□□ -1.46
TOPBP1-202ENST00000503338 RASL10AQ92737 203 aa5.9□□□□□ -1.46
TOPBP1-202ENST00000503338 MDFIQ99750 246 aa5.9□□□□□ -1.46
TOPBP1-202ENST00000503338 GSN-AS1Q9NRJ2 163 aa5.9□□□□□ -1.46
TOPBP1-202ENST00000503338 U3KQK5 164 aa5.9□□□□□ -1.46
TOPBP1-202ENST00000503338 D6R8Y8 96 aa5.89□□□□□ -1.47
TOPBP1-202ENST00000503338 HOXA5P20719 270 aa5.89□□□□□ -1.47
TOPBP1-202ENST00000503338 KRTAP10-11P60412 298 aa5.89□□□□□ -1.47
TOPBP1-202ENST00000503338 KRTAP21-3Q3LHN1 58 aa5.89□□□□□ -1.47
TOPBP1-202ENST00000503338 MRPL51Q4U2R6 128 aaKnown RBP5.89□□□□□ -1.47
TOPBP1-202ENST00000503338 POM121L12Q8N7R1 296 aa5.89□□□□□ -1.47
TOPBP1-202ENST00000503338 IL17DQ8TAD2 202 aa5.89□□□□□ -1.47
TOPBP1-202ENST00000503338 RNF185Q96GF1 192 aa5.89□□□□□ -1.47
TOPBP1-202ENST00000503338 PRELID3AQ96N28 172 aa5.89□□□□□ -1.47
TOPBP1-202ENST00000503338 G3V4G9 280 aa5.88□□□□□ -1.47
TOPBP1-202ENST00000503338 H7C1H1 209 aa5.88□□□□□ -1.47
TOPBP1-202ENST00000503338 ESDP10768 282 aa5.88□□□□□ -1.47
TOPBP1-202ENST00000503338 S100A2P29034 98 aa5.88□□□□□ -1.47
TOPBP1-202ENST00000503338 SNRPEP62304 92 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-202ENST00000503338 C14orf178Q8N769 122 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-202ENST00000503338 C18orf32Q8TCD1 76 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms