RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 GAGE12HA6NDE8 117 aa18.52■□□□□ 0.55
DDX41-202ENST00000503078 PPP1R17O96001 155 aa18.52■□□□□ 0.55
DDX41-202ENST00000503078 CRIP2P52943 208 aaPredicted RBP18.52■□□□□ 0.55
DDX41-202ENST00000503078 SCGB2A2Q13296 93 aa18.52■□□□□ 0.55
DDX41-202ENST00000503078 MORN3Q6PF18 240 aaPredicted RBP18.52■□□□□ 0.55
DDX41-202ENST00000503078 FAM19A4Q96LR4 140 aa18.52■□□□□ 0.55
DDX41-202ENST00000503078 GTSF1LQ9H1H1 148 aa18.52■□□□□ 0.55
DDX41-202ENST00000503078 NDUFA4O00483 81 aa18.51■□□□□ 0.55
DDX41-202ENST00000503078 BPESC1Q9GZL8 116 aa18.51■□□□□ 0.55
DDX41-202ENST00000503078 TRBV12-3P01733 135 aa18.5■□□□□ 0.55
DDX41-202ENST00000503078 SCGB1A1P11684 91 aa18.5■□□□□ 0.55
DDX41-202ENST00000503078 RNASE4P34096 147 aaKnown RBP18.5■□□□□ 0.55
DDX41-202ENST00000503078 SPAG8Q99932 426 aaPredicted RBP18.5■□□□□ 0.55
DDX41-202ENST00000503078 ZNF815PA8K554 130 aa18.49■□□□□ 0.55
DDX41-202ENST00000503078 GNRH2O43555 120 aa18.49■□□□□ 0.55
DDX41-202ENST00000503078 UBTD1Q9HAC8 227 aa18.49■□□□□ 0.55
DDX41-202ENST00000503078 RNASE3P12724 160 aaKnown RBP18.49■□□□□ 0.55
DDX41-202ENST00000503078 APRG1Q8IVJ8 170 aa18.49■□□□□ 0.55
DDX41-202ENST00000503078 CHD8Q9HCK8 2581 aa18.48■□□□□ 0.55
DDX41-202ENST00000503078 MTURNQ8N3F0 131 aa18.48■□□□□ 0.55
DDX41-202ENST00000503078 POM121L12Q8N7R1 296 aa18.48■□□□□ 0.55
DDX41-202ENST00000503078 SPATA25Q9BR10 227 aa18.48■□□□□ 0.55
DDX41-202ENST00000503078 PGPEP1Q9NXJ5 209 aa18.48■□□□□ 0.55
DDX41-202ENST00000503078 TMEM238LA0A1B0GVL6 79 aa18.47■□□□□ 0.55
DDX41-202ENST00000503078 A6NJY4 79 aa18.47■□□□□ 0.55
DDX41-202ENST00000503078 COX6B1P14854 86 aa18.47■□□□□ 0.55
DDX41-202ENST00000503078 SCGB1D4Q6XE38 83 aa18.47■□□□□ 0.55
DDX41-202ENST00000503078 F6UB75 175 aa18.46■□□□□ 0.55
DDX41-202ENST00000503078 NCOR2Q9Y618 2525 aa18.46■□□□□ 0.55
DDX41-202ENST00000503078 COL6A6A6NMZ7 2263 aa18.46■□□□□ 0.55
DDX41-202ENST00000503078 RPL11P62913 178 aaKnown RBP18.46■□□□□ 0.55
DDX41-202ENST00000503078 SMAGPQ0VAQ4 97 aa18.46■□□□□ 0.55
DDX41-202ENST00000503078 LCNL1Q6ZST4 164 aa18.46■□□□□ 0.55
DDX41-202ENST00000503078 PLEKHB2Q96CS7 222 aa18.46■□□□□ 0.55
DDX41-202ENST00000503078 MRPL16Q9NX20 251 aaKnown RBP18.46■□□□□ 0.55
DDX41-202ENST00000503078 TRBV7-9A0A0J9YWB2 115 aa18.45■□□□□ 0.54
DDX41-202ENST00000503078 DUSP14O95147 198 aaKnown RBP18.45■□□□□ 0.54
DDX41-202ENST00000503078 CRYGDP07320 174 aa18.45■□□□□ 0.54
DDX41-202ENST00000503078 IGHV3OR16-10A0A075B7F0 116 aa18.44■□□□□ 0.54
DDX41-202ENST00000503078 IGHV1-69DA0A0B4J2H0 117 aa18.44■□□□□ 0.54
DDX41-202ENST00000503078 NXPH4O95158 308 aa18.44■□□□□ 0.54
DDX41-202ENST00000503078 LY6DQ14210 128 aa18.44■□□□□ 0.54
DDX41-202ENST00000503078 UBE2D1P51668 147 aa18.44■□□□□ 0.54
DDX41-202ENST00000503078 SRSF9Q13242 221 aaKnown RBP eCLIP18.44■□□□□ 0.54
DDX41-202ENST00000503078 KIF25-AS1Q9Y6Z4 181 aa18.44■□□□□ 0.54
DDX41-202ENST00000503078 ASH1LQ9NR48 2969 aaKnown RBP18.43■□□□□ 0.54
DDX41-202ENST00000503078 LINC00315P59091 139 aa18.42■□□□□ 0.54
DDX41-202ENST00000503078 RPL32P62910 135 aaKnown RBP18.42■□□□□ 0.54
DDX41-202ENST00000503078 IGHV4OR15-8A0A075B7B6 117 aa18.42■□□□□ 0.54
DDX41-202ENST00000503078 A0A087WW49 117 aa18.42■□□□□ 0.54
DDX41-202ENST00000503078 LINC01549A6NIU2 74 aa18.42■□□□□ 0.54
DDX41-202ENST00000503078 TSHBP01222 138 aa18.42■□□□□ 0.54
DDX41-202ENST00000503078 IGLV4-69A0A075B6H9 119 aa18.41■□□□□ 0.54
DDX41-202ENST00000503078 C11orf86A6NJI1 115 aa18.41■□□□□ 0.54
DDX41-202ENST00000503078 PAPPA-AS1Q5QFB9 102 aa18.41■□□□□ 0.54
DDX41-202ENST00000503078 KLHL30-AS1Q8NEE0 82 aa18.41■□□□□ 0.54
DDX41-202ENST00000503078 TP53TG1Q9Y2A0 90 aa18.41■□□□□ 0.54
DDX41-202ENST00000503078 IGKV3-7A0A075B6H7 116 aa18.41■□□□□ 0.54
DDX41-202ENST00000503078 DLX4Q92988 240 aaPredicted RBP18.41■□□□□ 0.54
DDX41-202ENST00000503078 USMG5Q96IX5 58 aa18.41■□□□□ 0.54
DDX41-202ENST00000503078 NDUFS8O00217 210 aa18.4■□□□□ 0.54
DDX41-202ENST00000503078 IGHV3-11P01762 117 aa18.4■□□□□ 0.54
DDX41-202ENST00000503078 INSL3P51460 131 aa18.4■□□□□ 0.54
DDX41-202ENST00000503078 PRORYQ9H606 182 aa18.4■□□□□ 0.54
DDX41-202ENST00000503078 IGIPA6NJ69 53 aa18.4■□□□□ 0.54
DDX41-202ENST00000503078 HERVK_113P61574 105 aa18.4■□□□□ 0.54
DDX41-202ENST00000503078 IGHV1-69P01742 117 aa18.39■□□□□ 0.53
DDX41-202ENST00000503078 CFAP126Q5VTH2 177 aa18.39■□□□□ 0.53
DDX41-202ENST00000503078 ZFP2Q6ZN57 461 aa18.39■□□□□ 0.53
DDX41-202ENST00000503078 MUC4Q99102 2169 aa18.39■□□□□ 0.53
DDX41-202ENST00000503078 CIDEAO60543 219 aa18.39■□□□□ 0.53
DDX41-202ENST00000503078 BRI3O95415 125 aa18.39■□□□□ 0.53
DDX41-202ENST00000503078 APOMO95445 188 aa18.39■□□□□ 0.53
DDX41-202ENST00000503078 POLR2KP53803 58 aaKnown RBP18.39■□□□□ 0.53
DDX41-202ENST00000503078 RHPN1-AS1Q9BWJ2 59 aa18.39■□□□□ 0.53
DDX41-202ENST00000503078 ITPR1Q14643 2758 aa18.39■□□□□ 0.53
DDX41-202ENST00000503078 H3BUA1 57 aa18.38■□□□□ 0.53
DDX41-202ENST00000503078 TSPAN13O95857 204 aa18.38■□□□□ 0.53
DDX41-202ENST00000503078 PMVKQ15126 192 aa18.38■□□□□ 0.53
DDX41-202ENST00000503078 BRD3OSQ6XYD6 125 aa18.38■□□□□ 0.53
DDX41-202ENST00000503078 SPTBN1Q01082 2364 aaKnown RBP18.38■□□□□ 0.53
DDX41-202ENST00000503078 HIVEP3Q5T1R4 2406 aa18.38■□□□□ 0.53
DDX41-202ENST00000503078 CD7P09564 240 aa18.38■□□□□ 0.53
DDX41-202ENST00000503078 A0A0J9YY99 117 aa18.37■□□□□ 0.53
DDX41-202ENST00000503078 KLLNB2CW77 178 aa18.37■□□□□ 0.53
DDX41-202ENST00000503078 EMP1P54849 157 aa18.37■□□□□ 0.53
DDX41-202ENST00000503078 SUMO4Q6EEV6 95 aa18.37■□□□□ 0.53
DDX41-202ENST00000503078 FAM159AQ6UWV7 190 aa18.37■□□□□ 0.53
DDX41-202ENST00000503078 TMEM141Q96I45 108 aa18.37■□□□□ 0.53
DDX41-202ENST00000503078 VCYO14598 125 aa18.36■□□□□ 0.53
DDX41-202ENST00000503078 ATP6V0E2Q8NHE4 81 aa18.36■□□□□ 0.53
DDX41-202ENST00000503078 ZFHX3Q15911 3703 aa18.35■□□□□ 0.53
DDX41-202ENST00000503078 SMCPP49901 116 aaPredicted RBP18.35■□□□□ 0.53
DDX41-202ENST00000503078 KIR2DL4Q99706 377 aa18.35■□□□□ 0.53
DDX41-202ENST00000503078 C1QTNF4Q9BXJ3 329 aa18.35■□□□□ 0.53
DDX41-202ENST00000503078 JPT2Q9H910 190 aa18.35■□□□□ 0.53
DDX41-202ENST00000503078 LOC107984156A0A0G2JMH3 177 aa18.35■□□□□ 0.53
DDX41-202ENST00000503078 IGHG2P01859 326 aa18.35■□□□□ 0.53
DDX41-202ENST00000503078 ARL17AQ8IVW1 177 aa18.35■□□□□ 0.53
DDX41-202ENST00000503078 TIMM17AQ99595 171 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms