RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 IGKV3D-20A0A0C4DH25 116 aa11.76□□□□□ -0.53
LMNA-217ENST00000498722 J3KRW8 73 aa11.76□□□□□ -0.53
LMNA-217ENST00000498722 RNASE4P34096 147 aaKnown RBP11.76□□□□□ -0.53
LMNA-217ENST00000498722 FXYD7P58549 80 aa11.76□□□□□ -0.53
LMNA-217ENST00000498722 GATD1Q8NB37 220 aa11.76□□□□□ -0.53
LMNA-217ENST00000498722 OR11H2Q8NH07 326 aa11.76□□□□□ -0.53
LMNA-217ENST00000498722 TPPP3Q9BW30 176 aa11.76□□□□□ -0.53
LMNA-217ENST00000498722 EDA2RQ9HAV5 297 aa11.76□□□□□ -0.53
LMNA-217ENST00000498722 XCL2Q9UBD3 114 aa11.76□□□□□ -0.53
LMNA-217ENST00000498722 C7orf71A4D174 169 aa11.75□□□□□ -0.53
LMNA-217ENST00000498722 A8MTW9 85 aa11.75□□□□□ -0.53
LMNA-217ENST00000498722 ARMS2P0C7Q2 107 aa11.75□□□□□ -0.53
LMNA-217ENST00000498722 CDKN1BP46527 198 aa11.75□□□□□ -0.53
LMNA-217ENST00000498722 MUC7Q8TAX7 377 aa11.75□□□□□ -0.53
LMNA-217ENST00000498722 C1QTNF4Q9BXJ3 329 aa11.75□□□□□ -0.53
LMNA-217ENST00000498722 A0A0J9YWU9 116 aa11.74□□□□□ -0.53
LMNA-217ENST00000498722 GRIFINA4D1Z8 144 aa11.74□□□□□ -0.53
LMNA-217ENST00000498722 HOXA5P20719 270 aa11.74□□□□□ -0.53
LMNA-217ENST00000498722 KCNS1Q96KK3 526 aa11.74□□□□□ -0.53
LMNA-217ENST00000498722 C11orf21Q9P2W6 132 aa11.74□□□□□ -0.53
LMNA-217ENST00000498722 GIG44P09565 113 aaPredicted RBP11.73□□□□□ -0.53
LMNA-217ENST00000498722 MED14OSP0DP75 135 aa11.73□□□□□ -0.53
LMNA-217ENST00000498722 COA6Q5JTJ3 125 aaKnown RBP11.73□□□□□ -0.53
LMNA-217ENST00000498722 CLUHP3Q96NS8 147 aa11.73□□□□□ -0.53
LMNA-217ENST00000498722 CNFNQ9BYD5 112 aa11.73□□□□□ -0.53
LMNA-217ENST00000498722 NAGKQ9UJ70 344 aa11.73□□□□□ -0.53
LMNA-217ENST00000498722 CACNG7P62955 275 aa11.72□□□□□ -0.53
LMNA-217ENST00000498722 DNLZQ5SXM8 178 aa11.72□□□□□ -0.53
LMNA-217ENST00000498722 FAM159AQ6UWV7 190 aa11.72□□□□□ -0.53
LMNA-217ENST00000498722 AMTNQ6UX39 209 aa11.72□□□□□ -0.53
LMNA-217ENST00000498722 ZNF493Q6ZR52 646 aa11.72□□□□□ -0.53
LMNA-217ENST00000498722 SNAI2O43623 268 aa11.71□□□□□ -0.53
LMNA-217ENST00000498722 OR5AL1P0C617 328 aa11.71□□□□□ -0.53
LMNA-217ENST00000498722 ASIPP42127 132 aa11.71□□□□□ -0.53
LMNA-217ENST00000498722 SLAQ13239 276 aa11.71□□□□□ -0.53
LMNA-217ENST00000498722 ANXA2RQ3ZCQ2 193 aa11.71□□□□□ -0.53
LMNA-217ENST00000498722 ZFAND6Q6FIF0 208 aa11.71□□□□□ -0.53
LMNA-217ENST00000498722 ZNF575Q86XF7 245 aa11.71□□□□□ -0.53
LMNA-217ENST00000498722 SSBP4Q9BWG4 385 aaPredicted RBP11.71□□□□□ -0.53
LMNA-217ENST00000498722 IGHV3OR16-12A0A075B7B8 117 aa11.7□□□□□ -0.54
LMNA-217ENST00000498722 C3orf84H3BNL1 204 aa11.7□□□□□ -0.54
LMNA-217ENST00000498722 DEFB4AO15263 64 aa11.7□□□□□ -0.54
LMNA-217ENST00000498722 S100A4P26447 101 aaKnown RBP11.7□□□□□ -0.54
LMNA-217ENST00000498722 Q0VG73 95 aa11.7□□□□□ -0.54
LMNA-217ENST00000498722 TWIST1Q15672 202 aa11.7□□□□□ -0.54
LMNA-217ENST00000498722 SPINK13Q1W4C9 94 aa11.7□□□□□ -0.54
LMNA-217ENST00000498722 OR10J3Q5JRS4 329 aa11.7□□□□□ -0.54
LMNA-217ENST00000498722 GFI1BQ5VTD9 330 aa11.7□□□□□ -0.54
LMNA-217ENST00000498722 TRAV12-3A0A0B4J271 114 aa11.69□□□□□ -0.54
LMNA-217ENST00000498722 M0R2Z0 102 aa11.69□□□□□ -0.54
LMNA-217ENST00000498722 ZNF324O75467 553 aaPredicted RBP11.69□□□□□ -0.54
LMNA-217ENST00000498722 AMBPP02760 352 aa11.69□□□□□ -0.54
LMNA-217ENST00000498722 NTF3P20783 257 aa11.69□□□□□ -0.54
LMNA-217ENST00000498722 SRIP30626 198 aa11.69□□□□□ -0.54
LMNA-217ENST00000498722 KIR3DS1Q14943 382 aa11.69□□□□□ -0.54
LMNA-217ENST00000498722 KIAA1644Q3SXP7 199 aa11.69□□□□□ -0.54
LMNA-217ENST00000498722 IL17DQ8TAD2 202 aa11.69□□□□□ -0.54
LMNA-217ENST00000498722 IGHV4-4A0A075B6R2 117 aa11.68□□□□□ -0.54
LMNA-217ENST00000498722 S100A2P29034 98 aa11.68□□□□□ -0.54
LMNA-217ENST00000498722 TDRG1Q3Y452 100 aa11.68□□□□□ -0.54
LMNA-217ENST00000498722 MUC21Q5SSG8 566 aa11.68□□□□□ -0.54
LMNA-217ENST00000498722 Q6ZQT7 251 aa11.68□□□□□ -0.54
LMNA-217ENST00000498722 SMIM15Q7Z3B0 74 aa11.68□□□□□ -0.54
LMNA-217ENST00000498722 CSNK1G2-AS1Q8NCQ2 148 aa11.68□□□□□ -0.54
LMNA-217ENST00000498722 C20orf144Q9BQM9 153 aa11.68□□□□□ -0.54
LMNA-217ENST00000498722 TRAV12-2A0A075B6T6 113 aa11.67□□□□□ -0.54
LMNA-217ENST00000498722 H3BVH4 76 aa11.67□□□□□ -0.54
LMNA-217ENST00000498722 SPANXN1Q5VSR9 72 aa11.67□□□□□ -0.54
LMNA-217ENST00000498722 TMEM208Q9BTX3 173 aa11.67□□□□□ -0.54
LMNA-217ENST00000498722 TMEM191AQ9H0A3 160 aa11.67□□□□□ -0.54
LMNA-217ENST00000498722 GOLT1BQ9Y3E0 138 aa11.67□□□□□ -0.54
LMNA-217ENST00000498722 IGHV1OR15-1A0A075B7D0 117 aa11.66□□□□□ -0.54
LMNA-217ENST00000498722 MIFP14174 115 aa11.66□□□□□ -0.54
LMNA-217ENST00000498722 CASC10Q5T4H9 136 aa11.66□□□□□ -0.54
LMNA-217ENST00000498722 BAGE3Q86Y29 109 aa11.66□□□□□ -0.54
LMNA-217ENST00000498722 HIST3H2BBQ8N257 126 aa11.66□□□□□ -0.54
LMNA-217ENST00000498722 ALKBH7Q9BT30 221 aaPredicted RBP11.66□□□□□ -0.54
LMNA-217ENST00000498722 X6R8D5 127 aa11.66□□□□□ -0.54
LMNA-217ENST00000498722 TRGV11A0A075B6L2 103 aa11.65□□□□□ -0.54
LMNA-217ENST00000498722 IGHV4-28A0A0C4DH34 117 aa11.65□□□□□ -0.54
LMNA-217ENST00000498722 INSP01308 110 aa11.65□□□□□ -0.54
LMNA-217ENST00000498722 FAM104BQ5XKR9 115 aa11.65□□□□□ -0.54
LMNA-217ENST00000498722 C11orf68Q9H3H3 251 aaKnown RBP11.65□□□□□ -0.54
LMNA-217ENST00000498722 PHLDA3Q9Y5J5 127 aa11.65□□□□□ -0.54
LMNA-217ENST00000498722 MUC21A0A0G2JKD1 596 aa11.64□□□□□ -0.55
LMNA-217ENST00000498722 MUC21A0A140T8X8 626 aa11.64□□□□□ -0.55
LMNA-217ENST00000498722 GNRH2O43555 120 aa11.64□□□□□ -0.55
LMNA-217ENST00000498722 AKR1D1P51857 326 aa11.64□□□□□ -0.55
LMNA-217ENST00000498722 SSTP61278 116 aa11.64□□□□□ -0.55
LMNA-217ENST00000498722 DMRTA1Q5VZB9 504 aa11.64□□□□□ -0.55
LMNA-217ENST00000498722 Q8NAQ8 132 aa11.64□□□□□ -0.55
LMNA-217ENST00000498722 OR10AG1Q8NH19 301 aa11.64□□□□□ -0.55
LMNA-217ENST00000498722 SCRT2Q9NQ03 307 aa11.64□□□□□ -0.55
LMNA-217ENST00000498722 DNAH7Q8WXX0 4024 aa11.64□□□□□ -0.55
LMNA-217ENST00000498722 CRXO43186 299 aaPredicted RBP11.63□□□□□ -0.55
LMNA-217ENST00000498722 ESDP10768 282 aa11.63□□□□□ -0.55
LMNA-217ENST00000498722 RNASE3P12724 160 aaKnown RBP11.63□□□□□ -0.55
LMNA-217ENST00000498722 ZNF705AQ6ZN79 300 aaPredicted RBP11.63□□□□□ -0.55
LMNA-217ENST00000498722 C18orf32Q8TCD1 76 aa11.63□□□□□ -0.55
LMNA-217ENST00000498722 TIMM8BQ9Y5J9 83 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms