RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 PLXNA2O75051 1894 aa0.62□□□□□ -2.31
VPS26A-208ENST00000497022 CDK13Q14004 1512 aaKnown RBP0.62□□□□□ -2.31
VPS26A-208ENST00000497022 KDM5AP29375 1690 aaKnown RBP0.62□□□□□ -2.31
VPS26A-208ENST00000497022 TOPAZ1Q8N9V7 1692 aa0.62□□□□□ -2.31
VPS26A-208ENST00000497022 MED12Q93074 2177 aa0.62□□□□□ -2.31
VPS26A-208ENST00000497022 NRKQ7Z2Y5 1582 aa0.62□□□□□ -2.31
VPS26A-208ENST00000497022 PHIPQ8WWQ0 1821 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 WNK3Q9BYP7 1800 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 MED14O60244 1454 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 ADGRL2O95490 1459 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 CFTRP13569 1480 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 CHD1O14646 1710 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 MON2Q7Z3U7 1717 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 A0A0G2JMM0 328 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 A0A1W2PPB8 328 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 KIR3DP1A8MWS1 328 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 H3BRM9 83 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 CDC42EP2O14613 210 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 NCR2O95944 276 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 TRACP01848 142 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 APODP05090 189 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 TPT1P13693 172 aaKnown RBP0.61□□□□□ -2.31
VPS26A-208ENST00000497022 COX7CP15954 63 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 SELENOWP63302 87 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 MIR22HGQ0VDD5 57 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 CATR1Q13166 79 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 INSL4Q14641 139 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 IZUMO2Q6UXV1 221 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 OR5AK2Q8NH90 309 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 TSKUQ8WUA8 353 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 PP6455Q8WZ26 134 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 AP1S3Q96PC3 154 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 ODF3Q96PU9 254 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 CIB3Q96Q77 187 aaPredicted RBP0.61□□□□□ -2.31
VPS26A-208ENST00000497022 CST11Q9H112 138 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 SLC35B3Q9H1N7 401 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 TMEM14CQ9P0S9 112 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 GNG8Q9UK08 70 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 ABCC5O15440 1437 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 ZNF469Q96JG9 3925 aaPredicted RBP0.61□□□□□ -2.31
VPS26A-208ENST00000497022 ASCC3Q8N3C0 2202 aaKnown RBP0.61□□□□□ -2.31
VPS26A-208ENST00000497022 ARHGEF5Q12774 1597 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 RB1CC1Q8TDY2 1594 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 KIAA1551Q9HCM1 1747 aa0.61□□□□□ -2.31
VPS26A-208ENST00000497022 LAMB1P07942 1786 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 ARHGAP5Q13017 1502 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 COL4A6Q14031 1691 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 TRBV20-1A0A075B6N2 111 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.6□□□□□ -2.31
VPS26A-208ENST00000497022 LOC107986453A0A1B0GWG9 222 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 FAM92AA1XBS5 289 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 KLF7O75840 302 aaPredicted RBP0.6□□□□□ -2.31
VPS26A-208ENST00000497022 DNAL4O96015 105 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 IGHV3-33P01772 117 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 SAA1P0DJI8 122 aaPredicted RBP0.6□□□□□ -2.31
VPS26A-208ENST00000497022 ETV6P41212 452 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 SPRNQ5BIV9 151 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 LINC00322Q6ZN03 302 aaPredicted RBP0.6□□□□□ -2.31
VPS26A-208ENST00000497022 FOXI2Q6ZQN5 318 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 ATOH7Q8N100 152 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 Q8N8P6 123 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 PLPP5Q8NEB5 264 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 TMEM203Q969S6 136 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 PSMG3Q9BT73 122 aaPredicted RBP0.6□□□□□ -2.31
VPS26A-208ENST00000497022 SNRNP25Q9BV90 132 aaKnown RBP0.6□□□□□ -2.31
VPS26A-208ENST00000497022 SEC11CQ9BY50 192 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 TMEM191AQ9H0A3 160 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 AGPAT4-IT1Q9H0P7 198 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 TAS2R8Q9NYW2 309 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 LINC00474Q9P2X8 69 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 METTL1Q9UBP6 276 aaKnown RBP0.6□□□□□ -2.31
VPS26A-208ENST00000497022 ABCA3Q99758 1704 aa0.6□□□□□ -2.31
VPS26A-208ENST00000497022 RBBP6Q7Z6E9 1792 aaKnown RBP0.6□□□□□ -2.31
VPS26A-208ENST00000497022 MYH9P35579 1960 aaKnown RBP0.59□□□□□ -2.31
VPS26A-208ENST00000497022 UBR1Q8IWV7 1749 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 LRRIQ1Q96JM4 1722 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 PEAK1Q9H792 1746 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 DIP2BQ9P265 1576 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 TROQ12816 1431 aaPredicted RBP0.59□□□□□ -2.31
VPS26A-208ENST00000497022 TRAV12-2A0A075B6T6 113 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 IGLV3-32A0A0A0MS00 114 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 CLPSL1A2RUU4 121 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 FAM25AB3EWG3 89 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 FAM25CB3EWG5 89 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 FAM25GB3EWG6 89 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 M0R2P5 195 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 MT-ATP8P03928 68 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 AKAIN1P0CW23 69 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 FGF7P21781 194 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 PCBD1P61457 104 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 LSM3P62310 102 aaKnown RBP0.59□□□□□ -2.31
VPS26A-208ENST00000497022 HSD52Q0P140 79 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 LINC01545Q5VT33 79 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 Q6AWC8 147 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 C9orf62Q8N4C0 152 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 C5orf17Q8NAS9 161 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 TCEAL7Q9BRU2 100 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 PDCD10Q9BUL8 212 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 MPC1Q9Y5U8 109 aa0.59□□□□□ -2.31
VPS26A-208ENST00000497022 LINC00312Q9Y6C7 94 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms