RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 CXCL1P09341 107 aa10.05□□□□□ -0.8
ATPAF2-208ENST00000496852 DNLZQ5SXM8 178 aa10.05□□□□□ -0.8
ATPAF2-208ENST00000496852 MRPL54Q6P161 138 aaKnown RBP10.05□□□□□ -0.8
ATPAF2-208ENST00000496852 LYZL1Q6UWQ5 148 aa10.05□□□□□ -0.8
ATPAF2-208ENST00000496852 Q8NAQ8 132 aa10.05□□□□□ -0.8
ATPAF2-208ENST00000496852 C11orf72Q8NBR9 251 aa10.05□□□□□ -0.8
ATPAF2-208ENST00000496852 IGHV3-16A0A0C4DH30 117 aa10.04□□□□□ -0.8
ATPAF2-208ENST00000496852 PLAC8L1A1L4L8 177 aa10.04□□□□□ -0.8
ATPAF2-208ENST00000496852 ARMS2P0C7Q2 107 aa10.04□□□□□ -0.8
ATPAF2-208ENST00000496852 ZNF493Q6ZR52 646 aa10.04□□□□□ -0.8
ATPAF2-208ENST00000496852 C16orf74Q96GX8 76 aa10.04□□□□□ -0.8
ATPAF2-208ENST00000496852 BTF3L4Q96K17 158 aa10.04□□□□□ -0.8
ATPAF2-208ENST00000496852 ZMAT4Q9H898 229 aa10.04□□□□□ -0.8
ATPAF2-208ENST00000496852 MDFICQ9P1T7 246 aa10.04□□□□□ -0.8
ATPAF2-208ENST00000496852 NACAE9PAV3 2078 aa10.03□□□□□ -0.8
ATPAF2-208ENST00000496852 IGHV4-28A0A0C4DH34 117 aa10.03□□□□□ -0.8
ATPAF2-208ENST00000496852 FAM231BA6NCW3 169 aa10.02□□□□□ -0.8
ATPAF2-208ENST00000496852 NHLRC4P0CG21 123 aaPredicted RBP10.02□□□□□ -0.8
ATPAF2-208ENST00000496852 RNASE3P12724 160 aaKnown RBP10.02□□□□□ -0.8
ATPAF2-208ENST00000496852 RAB4BP61018 213 aa10.02□□□□□ -0.8
ATPAF2-208ENST00000496852 IL17DQ8TAD2 202 aa10.02□□□□□ -0.8
ATPAF2-208ENST00000496852 FAM210BQ96KR6 192 aa10.02□□□□□ -0.8
ATPAF2-208ENST00000496852 GSN-AS1Q9NRJ2 163 aa10.02□□□□□ -0.8
ATPAF2-208ENST00000496852 COL7A1Q02388 2944 aa10.02□□□□□ -0.8
ATPAF2-208ENST00000496852 CAMPP49913 170 aa10.02□□□□□ -0.81
ATPAF2-208ENST00000496852 ZNF415Q09FC8 603 aa10.02□□□□□ -0.81
ATPAF2-208ENST00000496852 SPANXN1Q5VSR9 72 aa10.02□□□□□ -0.81
ATPAF2-208ENST00000496852 PHLDA3Q9Y5J5 127 aa10.02□□□□□ -0.81
ATPAF2-208ENST00000496852 IGLC6P0CF74 106 aa10.01□□□□□ -0.81
ATPAF2-208ENST00000496852 FOXA3P55318 350 aaPredicted RBP10.01□□□□□ -0.81
ATPAF2-208ENST00000496852 RIGQ13278 110 aa10.01□□□□□ -0.81
ATPAF2-208ENST00000496852 TWIST1Q15672 202 aa10.01□□□□□ -0.81
ATPAF2-208ENST00000496852 C9orf85Q96MD7 179 aa10.01□□□□□ -0.81
ATPAF2-208ENST00000496852 TRAV9-1A0A075B6T8 112 aa10□□□□□ -0.81
ATPAF2-208ENST00000496852 A0A1B0GUT8 65 aa10□□□□□ -0.81
ATPAF2-208ENST00000496852 COLCA2A8K830 154 aa10□□□□□ -0.81
ATPAF2-208ENST00000496852 SNURFLB1AK76 121 aa10□□□□□ -0.81
ATPAF2-208ENST00000496852 F2Z2F3 143 aa10□□□□□ -0.81
ATPAF2-208ENST00000496852 M0R381 172 aa10□□□□□ -0.81
ATPAF2-208ENST00000496852 DEFB4AO15263 64 aa10□□□□□ -0.81
ATPAF2-208ENST00000496852 MED14OSP0DP75 135 aa10□□□□□ -0.81
ATPAF2-208ENST00000496852 RPS10P46783 165 aaKnown RBP10□□□□□ -0.81
ATPAF2-208ENST00000496852 SSBP4Q9BWG4 385 aaPredicted RBP10□□□□□ -0.81
ATPAF2-208ENST00000496852 C11orf68Q9H3H3 251 aaKnown RBP10□□□□□ -0.81
ATPAF2-208ENST00000496852 SNAI2O43623 268 aa9.99□□□□□ -0.81
ATPAF2-208ENST00000496852 DAZ2Q13117 558 aaKnown RBP9.99□□□□□ -0.81
ATPAF2-208ENST00000496852 OR10AG1Q8NH19 301 aa9.99□□□□□ -0.81
ATPAF2-208ENST00000496852 YPEL4Q96NS1 127 aa9.99□□□□□ -0.81
ATPAF2-208ENST00000496852 SCRT2Q9NQ03 307 aa9.99□□□□□ -0.81
ATPAF2-208ENST00000496852 FBN3Q75N90 2809 aa9.99□□□□□ -0.81
ATPAF2-208ENST00000496852 TRBV24-1A0A075B6N3 115 aa9.99□□□□□ -0.81
ATPAF2-208ENST00000496852 OR5AL1P0C617 328 aa9.99□□□□□ -0.81
ATPAF2-208ENST00000496852 NTF3P20783 257 aa9.99□□□□□ -0.81
ATPAF2-208ENST00000496852 SPXQ9BT56 116 aa9.99□□□□□ -0.81
ATPAF2-208ENST00000496852 RAB5AP20339 215 aa9.98□□□□□ -0.81
ATPAF2-208ENST00000496852 EMP1P54849 157 aa9.98□□□□□ -0.81
ATPAF2-208ENST00000496852 CACNG7P62955 275 aa9.98□□□□□ -0.81
ATPAF2-208ENST00000496852 HBBP68871 147 aa9.98□□□□□ -0.81
ATPAF2-208ENST00000496852 NOP10Q9NPE3 64 aaKnown RBP9.98□□□□□ -0.81
ATPAF2-208ENST00000496852 A0A0J9YWU9 116 aa9.97□□□□□ -0.81
ATPAF2-208ENST00000496852 CTRLP40313 264 aa9.97□□□□□ -0.81
ATPAF2-208ENST00000496852 ATP5L2Q7Z4Y8 100 aa9.97□□□□□ -0.81
ATPAF2-208ENST00000496852 SYT8Q8NBV8 401 aa9.97□□□□□ -0.81
ATPAF2-208ENST00000496852 FRZBQ92765 325 aa9.97□□□□□ -0.81
ATPAF2-208ENST00000496852 MSRB1Q9NZV6 116 aa9.97□□□□□ -0.81
ATPAF2-208ENST00000496852 M0R2P5 195 aa9.96□□□□□ -0.81
ATPAF2-208ENST00000496852 ZFP82Q8N141 532 aa9.96□□□□□ -0.81
ATPAF2-208ENST00000496852 PTH2Q96A98 100 aa9.96□□□□□ -0.81
ATPAF2-208ENST00000496852 DKK2Q9UBU2 259 aa9.96□□□□□ -0.81
ATPAF2-208ENST00000496852 TRAPPC1Q9Y5R8 145 aa9.96□□□□□ -0.81
ATPAF2-208ENST00000496852 LYRM9A8MSI8 78 aa9.96□□□□□ -0.82
ATPAF2-208ENST00000496852 S100A8P05109 93 aa9.96□□□□□ -0.82
ATPAF2-208ENST00000496852 LGALS9BQ3B8N2 356 aa9.96□□□□□ -0.82
ATPAF2-208ENST00000496852 FAM222AQ5U5X8 452 aa9.96□□□□□ -0.82
ATPAF2-208ENST00000496852 DMRTA1Q5VZB9 504 aa9.96□□□□□ -0.82
ATPAF2-208ENST00000496852 WDR73Q6P4I2 378 aa9.96□□□□□ -0.82
ATPAF2-208ENST00000496852 SMIM15Q7Z3B0 74 aa9.96□□□□□ -0.82
ATPAF2-208ENST00000496852 LINC00612Q8N6U2 182 aa9.96□□□□□ -0.82
ATPAF2-208ENST00000496852 CELA1Q9UNI1 258 aa9.96□□□□□ -0.82
ATPAF2-208ENST00000496852 ZNF876PQ49A33 203 aa9.95□□□□□ -0.82
ATPAF2-208ENST00000496852 Q6ZTI0 123 aa9.95□□□□□ -0.82
ATPAF2-208ENST00000496852 RASL10AQ92737 203 aa9.95□□□□□ -0.82
ATPAF2-208ENST00000496852 CNFNQ9BYD5 112 aa9.95□□□□□ -0.82
ATPAF2-208ENST00000496852 MRPL16Q9NX20 251 aaKnown RBP9.95□□□□□ -0.82
ATPAF2-208ENST00000496852 A0A1B0GW15 77 aa9.94□□□□□ -0.82
ATPAF2-208ENST00000496852 A0A1B0GXF2 115 aa9.94□□□□□ -0.82
ATPAF2-208ENST00000496852 NXPH4O95158 308 aa9.94□□□□□ -0.82
ATPAF2-208ENST00000496852 FABP9Q0Z7S8 132 aa9.94□□□□□ -0.82
ATPAF2-208ENST00000496852 COX19Q49B96 90 aa9.94□□□□□ -0.82
ATPAF2-208ENST00000496852 PIK3CD-AS1Q5SR53 167 aa9.94□□□□□ -0.82
ATPAF2-208ENST00000496852 U3KQK5 164 aa9.94□□□□□ -0.82
ATPAF2-208ENST00000496852 IGHV4-4A0A075B6R2 117 aa9.93□□□□□ -0.82
ATPAF2-208ENST00000496852 TRGV1A0A0A0MS02 117 aa9.93□□□□□ -0.82
ATPAF2-208ENST00000496852 TRGC1P0CF51 173 aa9.93□□□□□ -0.82
ATPAF2-208ENST00000496852 SPART-AS1P0CW21 52 aa9.93□□□□□ -0.82
ATPAF2-208ENST00000496852 RASL11AQ6T310 242 aa9.93□□□□□ -0.82
ATPAF2-208ENST00000496852 TMEM136Q6ZRR5 245 aa9.93□□□□□ -0.82
ATPAF2-208ENST00000496852 NDUFAF3Q9BU61 184 aa9.93□□□□□ -0.82
ATPAF2-208ENST00000496852 MRPL18Q9H0U6 180 aaKnown RBP9.93□□□□□ -0.82
ATPAF2-208ENST00000496852 TEX48A0A1B0GUV7 120 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms