RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 SPINK4O60575 86 aa15.53■□□□□ 0.08
C9orf3-222ENST00000496567 ARMS2P0C7Q2 107 aa15.53■□□□□ 0.08
C9orf3-222ENST00000496567 MED14OSP0DP75 135 aa15.53■□□□□ 0.08
C9orf3-222ENST00000496567 M0R2P5 195 aa15.53■□□□□ 0.08
C9orf3-222ENST00000496567 TRGV1A0A0A0MS02 117 aa15.52■□□□□ 0.07
C9orf3-222ENST00000496567 GZMBP10144 247 aa15.52■□□□□ 0.07
C9orf3-222ENST00000496567 STAB2Q8WWQ8 2551 aa15.51■□□□□ 0.07
C9orf3-222ENST00000496567 A0A1W2PPQ1 181 aa15.51■□□□□ 0.07
C9orf3-222ENST00000496567 PPP1R2P9O14990 202 aa15.51■□□□□ 0.07
C9orf3-222ENST00000496567 OR5AL1P0C617 328 aa15.51■□□□□ 0.07
C9orf3-222ENST00000496567 DAD1P61803 113 aa15.51■□□□□ 0.07
C9orf3-222ENST00000496567 RNF212Q495C1 297 aa15.51■□□□□ 0.07
C9orf3-222ENST00000496567 Q6ZTI0 123 aa15.51■□□□□ 0.07
C9orf3-222ENST00000496567 SCRT2Q9NQ03 307 aa15.51■□□□□ 0.07
C9orf3-222ENST00000496567 PHLDA3Q9Y5J5 127 aa15.51■□□□□ 0.07
C9orf3-222ENST00000496567 V9GYV3 84 aa15.51■□□□□ 0.07
C9orf3-222ENST00000496567 TGP01266 2768 aa15.51■□□□□ 0.07
C9orf3-222ENST00000496567 DEFB130BP0DP73 79 aa15.5■□□□□ 0.07
C9orf3-222ENST00000496567 DEFB130AP0DP74 79 aa15.5■□□□□ 0.07
C9orf3-222ENST00000496567 LINC00612Q8N6U2 182 aa15.5■□□□□ 0.07
C9orf3-222ENST00000496567 FER1L6-AS1Q8NA97 138 aa15.5■□□□□ 0.07
C9orf3-222ENST00000496567 RASL10AQ92737 203 aa15.5■□□□□ 0.07
C9orf3-222ENST00000496567 PTH2Q96A98 100 aa15.5■□□□□ 0.07
C9orf3-222ENST00000496567 SSBP4Q9BWG4 385 aaPredicted RBP15.5■□□□□ 0.07
C9orf3-222ENST00000496567 MRPL16Q9NX20 251 aaKnown RBP15.5■□□□□ 0.07
C9orf3-222ENST00000496567 SNAI2O43623 268 aa15.49■□□□□ 0.07
C9orf3-222ENST00000496567 MT-ND4LP03901 98 aa15.49■□□□□ 0.07
C9orf3-222ENST00000496567 IGLC6P0CF74 106 aa15.49■□□□□ 0.07
C9orf3-222ENST00000496567 ZNF876PQ49A33 203 aa15.49■□□□□ 0.07
C9orf3-222ENST00000496567 TSKUQ8WUA8 353 aa15.49■□□□□ 0.07
C9orf3-222ENST00000496567 NDUFAF3Q9BU61 184 aa15.49■□□□□ 0.07
C9orf3-222ENST00000496567 GAGE12BA1L429 117 aa15.49■□□□□ 0.07
C9orf3-222ENST00000496567 F2Z2F3 143 aa15.49■□□□□ 0.07
C9orf3-222ENST00000496567 GAGE7O76087 117 aa15.49■□□□□ 0.07
C9orf3-222ENST00000496567 GAGE12FP0CL80 117 aa15.49■□□□□ 0.07
C9orf3-222ENST00000496567 GAGE12GP0CL81 117 aa15.49■□□□□ 0.07
C9orf3-222ENST00000496567 GAGE12IP0CL82 117 aa15.49■□□□□ 0.07
C9orf3-222ENST00000496567 C12orf74Q32Q52 190 aa15.49■□□□□ 0.07
C9orf3-222ENST00000496567 SYT8Q8NBV8 401 aa15.49■□□□□ 0.07
C9orf3-222ENST00000496567 ANAPC16Q96DE5 110 aa15.49■□□□□ 0.07
C9orf3-222ENST00000496567 TPPP3Q9BW30 176 aa15.49■□□□□ 0.07
C9orf3-222ENST00000496567 GFRA4Q9GZZ7 299 aa15.49■□□□□ 0.07
C9orf3-222ENST00000496567 A0A087WWC5 75 aa15.48■□□□□ 0.07
C9orf3-222ENST00000496567 FAM231BA6NCW3 169 aa15.48■□□□□ 0.07
C9orf3-222ENST00000496567 NANOS2P60321 138 aaKnown RBP15.48■□□□□ 0.07
C9orf3-222ENST00000496567 PIK3CD-AS1Q5SR53 167 aa15.48■□□□□ 0.07
C9orf3-222ENST00000496567 TRGV2A0A075B6R0 118 aa15.47■□□□□ 0.07
C9orf3-222ENST00000496567 TMEM88Q6PEY1 159 aa15.47■□□□□ 0.07
C9orf3-222ENST00000496567 CBLN2Q8IUK8 224 aa15.47■□□□□ 0.07
C9orf3-222ENST00000496567 ZFP82Q8N141 532 aa15.47■□□□□ 0.07
C9orf3-222ENST00000496567 C18orf15Q96N68 181 aa15.46■□□□□ 0.07
C9orf3-222ENST00000496567 FOXA3P55318 350 aaPredicted RBP15.45■□□□□ 0.06
C9orf3-222ENST00000496567 SPANXN1Q5VSR9 72 aa15.45■□□□□ 0.06
C9orf3-222ENST00000496567 LYZL1Q6UWQ5 148 aa15.45■□□□□ 0.06
C9orf3-222ENST00000496567 GTSF1Q8WW33 167 aa15.45■□□□□ 0.06
C9orf3-222ENST00000496567 WWC2-AS2Q96NR7 200 aa15.45■□□□□ 0.06
C9orf3-222ENST00000496567 CTDSP1Q9GZU7 261 aa15.45■□□□□ 0.06
C9orf3-222ENST00000496567 MUC4Q99102 2169 aa15.45■□□□□ 0.06
C9orf3-222ENST00000496567 M0R381 172 aa15.45■□□□□ 0.06
C9orf3-222ENST00000496567 CTRLP40313 264 aa15.45■□□□□ 0.06
C9orf3-222ENST00000496567 CACNG7P62955 275 aa15.45■□□□□ 0.06
C9orf3-222ENST00000496567 DMRTA1Q5VZB9 504 aa15.45■□□□□ 0.06
C9orf3-222ENST00000496567 OR10AG1Q8NH19 301 aa15.45■□□□□ 0.06
C9orf3-222ENST00000496567 Q6ZTC4 211 aa15.44■□□□□ 0.06
C9orf3-222ENST00000496567 HIGD1CA8MV81 97 aa15.43■□□□□ 0.06
C9orf3-222ENST00000496567 WDR73Q6P4I2 378 aa15.43■□□□□ 0.06
C9orf3-222ENST00000496567 TMEM242Q9NWH2 141 aa15.43■□□□□ 0.06
C9orf3-222ENST00000496567 MUC21A0A0G2JKD1 596 aa15.42■□□□□ 0.06
C9orf3-222ENST00000496567 MUC21A0A140T8X8 626 aa15.42■□□□□ 0.06
C9orf3-222ENST00000496567 SMIM27A0A1W2PRY6 76 aa15.42■□□□□ 0.06
C9orf3-222ENST00000496567 NXPH4O95158 308 aa15.42■□□□□ 0.06
C9orf3-222ENST00000496567 ATP5G1P05496 136 aa15.42■□□□□ 0.06
C9orf3-222ENST00000496567 PGLYRP4Q96LB8 373 aa15.42■□□□□ 0.06
C9orf3-222ENST00000496567 SMCO4Q9NRQ5 59 aa15.42■□□□□ 0.06
C9orf3-222ENST00000496567 NAT8BQ9UHF3 227 aa15.42■□□□□ 0.06
C9orf3-222ENST00000496567 TRAV4A0A0B4J268 109 aa15.41■□□□□ 0.06
C9orf3-222ENST00000496567 A8MWV9 139 aa15.41■□□□□ 0.06
C9orf3-222ENST00000496567 BORCS7Q96B45 105 aa15.41■□□□□ 0.06
C9orf3-222ENST00000496567 CNFNQ9BYD5 112 aa15.41■□□□□ 0.06
C9orf3-222ENST00000496567 IGHV4-4A0A075B6R2 117 aa15.41■□□□□ 0.06
C9orf3-222ENST00000496567 SSTP61278 116 aa15.41■□□□□ 0.06
C9orf3-222ENST00000496567 OR4C5Q8NGB2 326 aa15.41■□□□□ 0.06
C9orf3-222ENST00000496567 TRAV10A0A0B4J240 114 aa15.4■□□□□ 0.06
C9orf3-222ENST00000496567 RS1O15537 224 aa15.39■□□□□ 0.05
C9orf3-222ENST00000496567 CIDEAO60543 219 aa15.39■□□□□ 0.05
C9orf3-222ENST00000496567 CFAP126Q5VTH2 177 aa15.39■□□□□ 0.05
C9orf3-222ENST00000496567 NUP35Q8NFH5 326 aa15.39■□□□□ 0.05
C9orf3-222ENST00000496567 HTN3P15516 51 aa15.38■□□□□ 0.05
C9orf3-222ENST00000496567 NTF3P20783 257 aa15.38■□□□□ 0.05
C9orf3-222ENST00000496567 POM121L12Q8N7R1 296 aa15.38■□□□□ 0.05
C9orf3-222ENST00000496567 PHLDA1Q8WV24 401 aaPredicted RBP15.38■□□□□ 0.05
C9orf3-222ENST00000496567 URGCP-MRPS24S4R325 110 aa15.38■□□□□ 0.05
C9orf3-222ENST00000496567 DEFB131BA0A096LNP1 70 aa15.37■□□□□ 0.05
C9orf3-222ENST00000496567 A0A1B0GUT8 65 aa15.37■□□□□ 0.05
C9orf3-222ENST00000496567 IGHV3-53P01767 116 aa15.37■□□□□ 0.05
C9orf3-222ENST00000496567 TWIST1Q15672 202 aa15.36■□□□□ 0.05
C9orf3-222ENST00000496567 MUC7Q8TAX7 377 aa15.36■□□□□ 0.05
C9orf3-222ENST00000496567 ZNF479Q96JC4 524 aa15.36■□□□□ 0.05
C9orf3-222ENST00000496567 AP1S3Q96PC3 154 aa15.36■□□□□ 0.05
C9orf3-222ENST00000496567 IMMP2LQ96T52 175 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms