RNA–Protein interactions for RNA: ENST00000495985.5

ERCC8-207, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-207ENST00000495985 PVALEFA0A1B0GWK0 134 aa1.52□□□□□ -2.17
ERCC8-207ENST00000495985 KPNA4O00629 521 aaPredicted RBP1.52□□□□□ -2.17
ERCC8-207ENST00000495985 HYPMO75409 117 aa1.52□□□□□ -2.17
ERCC8-207ENST00000495985 HMGA1P17096 107 aaKnown RBP1.52□□□□□ -2.17
ERCC8-207ENST00000495985 RPS3P23396 243 aaKnown RBP eCLIP1.52□□□□□ -2.17
ERCC8-207ENST00000495985 OR5D14Q8NGL3 314 aa1.52□□□□□ -2.17
ERCC8-207ENST00000495985 TAF9BQ9HBM6 251 aa1.52□□□□□ -2.17
ERCC8-207ENST00000495985 TRAPPC2LQ9UL33 140 aa1.52□□□□□ -2.17
ERCC8-207ENST00000495985 ALPK2Q86TB3 2170 aa1.52□□□□□ -2.17
ERCC8-207ENST00000495985 OTOGLQ3ZCN5 2332 aa1.51□□□□□ -2.17
ERCC8-207ENST00000495985 AKAP13Q12802 2813 aa1.51□□□□□ -2.17
ERCC8-207ENST00000495985 SPTBN4Q9H254 2564 aa1.51□□□□□ -2.17
ERCC8-207ENST00000495985 IGHV1-58A0A0C4DH39 117 aa1.51□□□□□ -2.17
ERCC8-207ENST00000495985 LOC105371267A0A1B0GV96 52 aa1.51□□□□□ -2.17
ERCC8-207ENST00000495985 M0R233 179 aa1.51□□□□□ -2.17
ERCC8-207ENST00000495985 FABP2P12104 132 aa1.51□□□□□ -2.17
ERCC8-207ENST00000495985 ZNF93P35789 620 aaPredicted RBP1.51□□□□□ -2.17
ERCC8-207ENST00000495985 CDK6Q00534 326 aa1.51□□□□□ -2.17
ERCC8-207ENST00000495985 C4orf22Q6V702 233 aa1.51□□□□□ -2.17
ERCC8-207ENST00000495985 TMEM35BQ8NCS4 154 aa1.51□□□□□ -2.17
ERCC8-207ENST00000495985 TCEAL2Q9H3H9 227 aaPredicted RBP1.51□□□□□ -2.17
ERCC8-207ENST00000495985 KMT2BQ9UMN6 2715 aaPredicted RBP1.51□□□□□ -2.17
ERCC8-207ENST00000495985 FAM186AA6NE01 2351 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 SPEGQ15772 3267 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 CACNA1EQ15878 2313 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 ITPR1Q14643 2758 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 ASCC3Q8N3C0 2202 aaKnown RBP1.5□□□□□ -2.17
ERCC8-207ENST00000495985 DIDO1Q9BTC0 2240 aaKnown RBP1.5□□□□□ -2.17
ERCC8-207ENST00000495985 A0A087WSZ3 146 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 TRAV10A0A0B4J240 114 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 CCDC160A6NGH7 325 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 PAEPP09466 180 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 SDC2P34741 201 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 RPS28P62857 69 aaKnown RBP1.5□□□□□ -2.17
ERCC8-207ENST00000495985 TEX261Q6UWH6 196 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 DEFB119Q8N690 84 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 FAM216BQ8N7L0 139 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 C4orf3Q8WVX3 66 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 RAB37Q96AX2 223 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 HYLS1Q96M11 299 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 TP53RKQ96S44 253 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 RASL12Q9NYN1 266 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 KLK9Q9UKQ9 250 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 U3KQ87 197 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 CACNA1AO00555 2505 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 FREM2Q5SZK8 3169 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 CFAP47Q6ZTR5 3102 aa1.5□□□□□ -2.17
ERCC8-207ENST00000495985 ASPMQ8IZT6 3477 aa1.49□□□□□ -2.17
ERCC8-207ENST00000495985 LOC400499M0QZD8 3231 aa1.49□□□□□ -2.17
ERCC8-207ENST00000495985 IGKV3D-7A0A0C4DH55 119 aa1.49□□□□□ -2.17
ERCC8-207ENST00000495985 IGKV3OR2-268A0A0C4DH90 116 aa1.49□□□□□ -2.17
ERCC8-207ENST00000495985 FAM92AA1XBS5 289 aa1.49□□□□□ -2.17
ERCC8-207ENST00000495985 OR2T8A6NH00 312 aa1.49□□□□□ -2.17
ERCC8-207ENST00000495985 ZNF736B4DX44 427 aaPredicted RBP1.49□□□□□ -2.17
ERCC8-207ENST00000495985 PRB1P04280 392 aa1.49□□□□□ -2.17
ERCC8-207ENST00000495985 KRTAP26-1Q6PEX3 210 aa1.49□□□□□ -2.17
ERCC8-207ENST00000495985 TMEM14EPQ6UXP3 125 aa1.49□□□□□ -2.17
ERCC8-207ENST00000495985 ZNF833PQ6ZTB9 187 aa1.49□□□□□ -2.17
ERCC8-207ENST00000495985 DEFB124Q8NES8 71 aa1.49□□□□□ -2.17
ERCC8-207ENST00000495985 MUCL1Q96DR8 90 aa1.49□□□□□ -2.17
ERCC8-207ENST00000495985 GGACTQ9BVM4 153 aa1.49□□□□□ -2.17
ERCC8-207ENST00000495985 F5P12259 2224 aa1.49□□□□□ -2.17
ERCC8-207ENST00000495985 PIEZO1Q92508 2521 aa1.49□□□□□ -2.17
ERCC8-207ENST00000495985 INTS1Q8N201 2190 aaKnown RBP1.49□□□□□ -2.17
ERCC8-207ENST00000495985 MED13Q9UHV7 2174 aa1.49□□□□□ -2.17
ERCC8-207ENST00000495985 MAP1BP46821 2468 aaKnown RBP1.49□□□□□ -2.17
ERCC8-207ENST00000495985 GVINP1Q7Z2Y8 2422 aa1.49□□□□□ -2.17
ERCC8-207ENST00000495985 CACNA1HO95180 2353 aa1.49□□□□□ -2.17
ERCC8-207ENST00000495985 ZZEF1O43149 2961 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 CEP250Q9BV73 2442 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 SNRNP200O75643 2136 aaKnown RBP1.48□□□□□ -2.17
ERCC8-207ENST00000495985 USP24Q9UPU5 2620 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 DSPP15924 2871 aaKnown RBP1.48□□□□□ -2.17
ERCC8-207ENST00000495985 ATMQ13315 3056 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 TRAV27A0A087WT01 109 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 A0A087WX48 190 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 SPAARA0A1B0GVQ0 90 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 hDV103S1A0JD37 113 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 MT-ND6P03923 174 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 SDC4P31431 198 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 NDUFA6P56556 154 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 C2orf82Q6UX34 121 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 LINC00305Q7Z4B0 112 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 DEFB106AQ8N104 65 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 TMEM229BQ8NBD8 167 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 Q8TAT8 98 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 PATE1Q8WXA2 126 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 DIRC1Q969H9 104 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 MCEEQ96PE7 176 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 BATF3Q9NR55 127 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 SNURFQ9Y675 71 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 DMXL2Q8TDJ6 3036 aa1.48□□□□□ -2.17
ERCC8-207ENST00000495985 SCN3AQ9NY46 2000 aa1.47□□□□□ -2.17
ERCC8-207ENST00000495985 TNRC6AQ8NDV7 1962 aaKnown RBP1.47□□□□□ -2.17
ERCC8-207ENST00000495985 ARFGEF3Q5TH69 2177 aa1.47□□□□□ -2.17
ERCC8-207ENST00000495985 LOC110117498A0A087WWA1 95 aa1.47□□□□□ -2.17
ERCC8-207ENST00000495985 TRBV7-6A0A0J9YX20 115 aa1.47□□□□□ -2.17
ERCC8-207ENST00000495985 LYRM1O43325 122 aa1.47□□□□□ -2.17
ERCC8-207ENST00000495985 ERC2-IT1O76042 136 aa1.47□□□□□ -2.17
ERCC8-207ENST00000495985 CD2P06729 351 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms