RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 TMEM256Q8N2U0 113 aa4.98□□□□□ -1.61
MSH5-217ENST00000494458 URB1-AS1Q96HZ7 61 aa4.98□□□□□ -1.61
MSH5-217ENST00000494458 HIST1H2BLQ99880 126 aa4.98□□□□□ -1.61
MSH5-217ENST00000494458 ZNF747Q9BV97 191 aa4.98□□□□□ -1.61
MSH5-217ENST00000494458 MSRB1Q9NZV6 116 aa4.98□□□□□ -1.61
MSH5-217ENST00000494458 KIF25-AS1Q9Y6Z4 181 aa4.98□□□□□ -1.61
MSH5-217ENST00000494458 IGHV1OR15-1A0A075B7D0 117 aa4.97□□□□□ -1.61
MSH5-217ENST00000494458 OR11H12B2RN74 326 aa4.97□□□□□ -1.61
MSH5-217ENST00000494458 SAP30O75446 220 aa4.97□□□□□ -1.61
MSH5-217ENST00000494458 PPBPP02775 128 aa4.97□□□□□ -1.61
MSH5-217ENST00000494458 ASIPP42127 132 aa4.97□□□□□ -1.61
MSH5-217ENST00000494458 LINC00315P59091 139 aa4.97□□□□□ -1.61
MSH5-217ENST00000494458 RAB4BP61018 213 aa4.97□□□□□ -1.61
MSH5-217ENST00000494458 ZNF124Q15973 351 aa4.97□□□□□ -1.61
MSH5-217ENST00000494458 KRTAP24-1Q3LI83 254 aa4.97□□□□□ -1.61
MSH5-217ENST00000494458 KIAA1644Q3SXP7 199 aa4.97□□□□□ -1.61
MSH5-217ENST00000494458 MRPL51Q4U2R6 128 aaKnown RBP4.97□□□□□ -1.61
MSH5-217ENST00000494458 OR10AG1Q8NH19 301 aa4.97□□□□□ -1.61
MSH5-217ENST00000494458 BORCS7Q96B45 105 aa4.97□□□□□ -1.61
MSH5-217ENST00000494458 LAMTOR2Q9Y2Q5 125 aa4.97□□□□□ -1.61
MSH5-217ENST00000494458 WNK1Q9H4A3 2382 aa4.97□□□□□ -1.61
MSH5-217ENST00000494458 VWFP04275 2813 aa4.96□□□□□ -1.61
MSH5-217ENST00000494458 TEP1Q99973 2627 aaKnown RBP4.96□□□□□ -1.61
MSH5-217ENST00000494458 TRAV12-3A0A0B4J271 114 aa4.96□□□□□ -1.62
MSH5-217ENST00000494458 M0R2Z0 102 aa4.96□□□□□ -1.62
MSH5-217ENST00000494458 TWIST1Q15672 202 aa4.96□□□□□ -1.62
MSH5-217ENST00000494458 SPINK13Q1W4C9 94 aa4.96□□□□□ -1.62
MSH5-217ENST00000494458 C9orf66Q5T8R8 295 aa4.96□□□□□ -1.62
MSH5-217ENST00000494458 FAM159AQ6UWV7 190 aa4.96□□□□□ -1.62
MSH5-217ENST00000494458 PRIMA1Q86XR5 153 aa4.96□□□□□ -1.62
MSH5-217ENST00000494458 Q8N1Y9 231 aa4.96□□□□□ -1.62
MSH5-217ENST00000494458 CSNK1G2-AS1Q8NCQ2 148 aa4.96□□□□□ -1.62
MSH5-217ENST00000494458 SPATA3Q8NHX4 192 aa4.96□□□□□ -1.62
MSH5-217ENST00000494458 NDUFAF3Q9BU61 184 aa4.96□□□□□ -1.62
MSH5-217ENST00000494458 GSN-AS1Q9NRJ2 163 aa4.96□□□□□ -1.62
MSH5-217ENST00000494458 AGRNO00468 2067 aa4.96□□□□□ -1.62
MSH5-217ENST00000494458 FBN1P35555 2871 aaKnown RBP4.96□□□□□ -1.62
MSH5-217ENST00000494458 JMJD1CQ15652 2540 aa4.95□□□□□ -1.62
MSH5-217ENST00000494458 TRAV12-2A0A075B6T6 113 aa4.95□□□□□ -1.62
MSH5-217ENST00000494458 H3BVH4 76 aa4.95□□□□□ -1.62
MSH5-217ENST00000494458 SERF1AO75920 110 aa4.95□□□□□ -1.62
MSH5-217ENST00000494458 PF4P02776 101 aa4.95□□□□□ -1.62
MSH5-217ENST00000494458 CD7P09564 240 aa4.95□□□□□ -1.62
MSH5-217ENST00000494458 EVI2AP22794 236 aa4.95□□□□□ -1.62
MSH5-217ENST00000494458 AMN1Q8IY45 258 aa4.95□□□□□ -1.62
MSH5-217ENST00000494458 LINC00518Q8N0U6 118 aa4.95□□□□□ -1.62
MSH5-217ENST00000494458 ORMDL3Q8N138 153 aa4.95□□□□□ -1.62
MSH5-217ENST00000494458 C1orf158Q8N1D5 194 aa4.95□□□□□ -1.62
MSH5-217ENST00000494458 C11orf72Q8NBR9 251 aa4.95□□□□□ -1.62
MSH5-217ENST00000494458 IL17DQ8TAD2 202 aa4.95□□□□□ -1.62
MSH5-217ENST00000494458 CHCHD1Q96BP2 118 aaKnown RBP4.95□□□□□ -1.62
MSH5-217ENST00000494458 RCHY1Q96PM5 261 aa4.95□□□□□ -1.62
MSH5-217ENST00000494458 MCRIP2Q9BUT9 160 aaKnown RBP4.95□□□□□ -1.62
MSH5-217ENST00000494458 EDA2RQ9HAV5 297 aa4.95□□□□□ -1.62
MSH5-217ENST00000494458 MDFICQ9P1T7 246 aa4.95□□□□□ -1.62
MSH5-217ENST00000494458 ATRQ13535 2644 aa4.95□□□□□ -1.62
MSH5-217ENST00000494458 TRRAPQ9Y4A5 3859 aa4.95□□□□□ -1.62
MSH5-217ENST00000494458 CMYA5Q8N3K9 4069 aa4.94□□□□□ -1.62
MSH5-217ENST00000494458 IGLV2-18A0A075B6J9 118 aa4.94□□□□□ -1.62
MSH5-217ENST00000494458 TRGV11A0A075B6L2 103 aa4.94□□□□□ -1.62
MSH5-217ENST00000494458 M0R381 172 aa4.94□□□□□ -1.62
MSH5-217ENST00000494458 CRYGDP07320 174 aa4.94□□□□□ -1.62
MSH5-217ENST00000494458 LINC00614P0C842 121 aa4.94□□□□□ -1.62
MSH5-217ENST00000494458 RPL32P62910 135 aaKnown RBP4.94□□□□□ -1.62
MSH5-217ENST00000494458 MUC21Q5SSG8 566 aa4.94□□□□□ -1.62
MSH5-217ENST00000494458 UFSP1Q6NVU6 142 aa4.94□□□□□ -1.62
MSH5-217ENST00000494458 MORN3Q6PF18 240 aaPredicted RBP4.94□□□□□ -1.62
MSH5-217ENST00000494458 NIT1Q86X76 327 aa4.94□□□□□ -1.62
MSH5-217ENST00000494458 STHQ8IWL8 128 aa4.94□□□□□ -1.62
MSH5-217ENST00000494458 NRACQ8N912 160 aa4.94□□□□□ -1.62
MSH5-217ENST00000494458 TMEM18Q96B42 140 aa4.94□□□□□ -1.62
MSH5-217ENST00000494458 TPPP3Q9BW30 176 aa4.94□□□□□ -1.62
MSH5-217ENST00000494458 MUC4Q99102 2169 aa4.94□□□□□ -1.62
MSH5-217ENST00000494458 MUC21A0A0G2JKD1 596 aa4.93□□□□□ -1.62
MSH5-217ENST00000494458 MUC21A0A140T8X8 626 aa4.93□□□□□ -1.62
MSH5-217ENST00000494458 D6R8Y8 96 aa4.93□□□□□ -1.62
MSH5-217ENST00000494458 J3KRW8 73 aa4.93□□□□□ -1.62
MSH5-217ENST00000494458 GAS8-AS1O95177 125 aa4.93□□□□□ -1.62
MSH5-217ENST00000494458 IGKV3-20P01619 116 aa4.93□□□□□ -1.62
MSH5-217ENST00000494458 SMIM6P0DI80 62 aa4.93□□□□□ -1.62
MSH5-217ENST00000494458 PMCHP20382 165 aa4.93□□□□□ -1.62
MSH5-217ENST00000494458 NUTF2P61970 127 aaKnown RBP4.93□□□□□ -1.62
MSH5-217ENST00000494458 JOSD1Q15040 202 aaPredicted RBP4.93□□□□□ -1.62
MSH5-217ENST00000494458 IQCJQ1A5X6 159 aa4.93□□□□□ -1.62
MSH5-217ENST00000494458 PYY3Q5JQD4 70 aa4.93□□□□□ -1.62
MSH5-217ENST00000494458 SPANXN1Q5VSR9 72 aa4.93□□□□□ -1.62
MSH5-217ENST00000494458 ZNF705AQ6ZN79 300 aaPredicted RBP4.93□□□□□ -1.62
MSH5-217ENST00000494458 BAGE3Q86Y29 109 aa4.93□□□□□ -1.62
MSH5-217ENST00000494458 DNAH3Q8TD57 4116 aa4.93□□□□□ -1.62
MSH5-217ENST00000494458 TMEM158Q8WZ71 300 aa4.93□□□□□ -1.62
MSH5-217ENST00000494458 MRAP2Q96G30 205 aa4.93□□□□□ -1.62
MSH5-217ENST00000494458 PRELID3AQ96N28 172 aa4.93□□□□□ -1.62
MSH5-217ENST00000494458 SPXQ9BT56 116 aa4.93□□□□□ -1.62
MSH5-217ENST00000494458 DPH3P1Q9H4G8 78 aa4.93□□□□□ -1.62
MSH5-217ENST00000494458 PHLDA3Q9Y5J5 127 aa4.93□□□□□ -1.62
MSH5-217ENST00000494458 SPRY2O43597 315 aa4.92□□□□□ -1.62
MSH5-217ENST00000494458 TNFRSF6BO95407 300 aa4.92□□□□□ -1.62
MSH5-217ENST00000494458 NPYP01303 97 aa4.92□□□□□ -1.62
MSH5-217ENST00000494458 INSP01308 110 aa4.92□□□□□ -1.62
MSH5-217ENST00000494458 FABP4P15090 132 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms