RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 KIF26AQ9ULI4 1882 aaPredicted RBP1.36□□□□□ -2.19
PTPN12-212ENST00000494248 PPLO60437 1756 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 PTPN23Q9H3S7 1636 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 ATP10BO94823 1461 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 NRXN1Q9ULB1 1477 aa1.36□□□□□ -2.19
PTPN12-212ENST00000494248 ZNF638Q14966 1978 aaKnown RBP1.36□□□□□ -2.19
PTPN12-212ENST00000494248 KIF21AQ7Z4S6 1674 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 MON2Q7Z3U7 1717 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 ABCA8O94911 1581 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 MYH7BA7E2Y1 1941 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 MYH6P13533 1939 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 CHD4Q14839 1912 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 IGKV1D-42A0A075B6H8 117 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 IGHV3-64A0A075B6Q5 118 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 CRYM-AS1A6NIL9 109 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 C16orf90A8MZG2 172 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 SYS1-DBNDD2H3BUS1 97 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 IL4P05112 153 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 UBE2G1P62253 170 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 PMCHL1Q16048 86 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 MPV17LQ2QL34 196 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 ETDBQ3ZM63 59 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 C9orf116Q5BN46 136 aaPredicted RBP1.35□□□□□ -2.19
PTPN12-212ENST00000494248 NMSQ5H8A3 153 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 S100A7L2Q5SY68 101 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 RPL7L1Q6DKI1 246 aaKnown RBP1.35□□□□□ -2.19
PTPN12-212ENST00000494248 SLC48A1Q6P1K1 146 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 C18orf32Q8TCD1 76 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 C20orf166-AS1Q96NR2 134 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 OR8B2Q96RD0 313 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 CYP4F30PQ9H0H9 118 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 KIF14Q15058 1648 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 MROH1Q8NDA8 1641 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 MAP3K4Q9Y6R4 1608 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 MLH3Q9UHC1 1453 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 BRWD3Q6RI45 1802 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 DSCAMO60469 2012 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 USP54Q70EL1 1684 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 CUX1P39880 1505 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.35□□□□□ -2.19
PTPN12-212ENST00000494248 DISP1Q96F81 1524 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 LTBP1Q14766 1721 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 PEAK1Q9H792 1746 aa1.35□□□□□ -2.19
PTPN12-212ENST00000494248 SETBP1Q9Y6X0 1596 aa1.34□□□□□ -2.19
PTPN12-212ENST00000494248 EDC4Q6P2E9 1401 aaKnown RBP1.34□□□□□ -2.19
PTPN12-212ENST00000494248 PARP14Q460N5 1801 aa1.34□□□□□ -2.19
PTPN12-212ENST00000494248 IGLV4-69A0A075B6H9 119 aa1.34□□□□□ -2.19
PTPN12-212ENST00000494248 A0A087WWC5 75 aa1.34□□□□□ -2.19
PTPN12-212ENST00000494248 A0A087WXM4 84 aa1.34□□□□□ -2.19
PTPN12-212ENST00000494248 TRBV7-1A0A0A6YYK4 115 aa1.34□□□□□ -2.19
PTPN12-212ENST00000494248 TRAV13-2A0A0B4J235 113 aa1.34□□□□□ -2.19
PTPN12-212ENST00000494248 TCRBV4S1A1TA0A5B7 111 aa1.34□□□□□ -2.19
PTPN12-212ENST00000494248 BCE1O60756 84 aa1.34□□□□□ -2.19
PTPN12-212ENST00000494248 ERC2-IT1O76042 136 aa1.34□□□□□ -2.19
PTPN12-212ENST00000494248 CXCL8P10145 99 aa1.34□□□□□ -2.19
PTPN12-212ENST00000494248 RNASE2P10153 161 aaKnown RBP1.34□□□□□ -2.19
PTPN12-212ENST00000494248 SNRPFP62306 86 aaKnown RBP1.34□□□□□ -2.19
PTPN12-212ENST00000494248 EIF4EBP1Q13541 118 aaPredicted RBP1.34□□□□□ -2.19
PTPN12-212ENST00000494248 WFDC2Q14508 124 aa1.34□□□□□ -2.19
PTPN12-212ENST00000494248 SPATA45Q537H7 98 aa1.34□□□□□ -2.19
PTPN12-212ENST00000494248 LYPD6Q86Y78 171 aa1.34□□□□□ -2.19
PTPN12-212ENST00000494248 OR8B3Q8NGG8 313 aa1.34□□□□□ -2.19
PTPN12-212ENST00000494248 TMEM254Q8TBM7 123 aa1.34□□□□□ -2.19
PTPN12-212ENST00000494248 NXT2Q9NPJ8 142 aaKnown RBP1.34□□□□□ -2.19
PTPN12-212ENST00000494248 LINC00474Q9P2X8 69 aa1.34□□□□□ -2.19
PTPN12-212ENST00000494248 MINOS1-NBL1R4GNA1 71 aa1.34□□□□□ -2.19
PTPN12-212ENST00000494248 ABCC1P33527 1531 aa1.34□□□□□ -2.2
PTPN12-212ENST00000494248 KCPQ6ZWJ8 1503 aa1.34□□□□□ -2.2
PTPN12-212ENST00000494248 DUOX2Q9NRD8 1548 aa1.34□□□□□ -2.2
PTPN12-212ENST00000494248 PTPRBP23467 1997 aa1.34□□□□□ -2.2
PTPN12-212ENST00000494248 MYH9P35579 1960 aaKnown RBP1.34□□□□□ -2.2
PTPN12-212ENST00000494248 EML6Q6ZMW3 1958 aa1.34□□□□□ -2.2
PTPN12-212ENST00000494248 UNC13BO14795 1591 aa1.34□□□□□ -2.2
PTPN12-212ENST00000494248 DOCK8Q8NF50 2099 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 CDK12Q9NYV4 1490 aaPredicted RBP1.33□□□□□ -2.2
PTPN12-212ENST00000494248 COL24A1Q17RW2 1714 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 SUPT6HQ7KZ85 1726 aaKnown RBP1.33□□□□□ -2.2
PTPN12-212ENST00000494248 TRPM3Q9HCF6 1732 aaPredicted RBP1.33□□□□□ -2.2
PTPN12-212ENST00000494248 IGHV3OR16-8A0A075B7F1 116 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 TRAV10A0A0B4J240 114 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 TRBV10-3A0A0K0K1G6 114 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 MUC21A0A140T8X8 626 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 ODF3BA8MYP8 253 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 F2Z2F3 143 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 H3BUT2 72 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 ZNF861PO60384 105 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 ACYP1P07311 99 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 MIR22HGQ0VDD5 57 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 ZCCHC23Q6ZST2 131 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 CYP2G1PQ6ZSU1 146 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 NDUFA11Q86Y39 141 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 CDC42SE1Q9NRR8 79 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 S4R3C0 116 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 EFCAB5A4FU69 1503 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 KIDINS220Q9ULH0 1771 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 SHROOM2Q13796 1616 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 PREX2Q70Z35 1606 aa1.33□□□□□ -2.2
PTPN12-212ENST00000494248 PTPRMP28827 1452 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 IQSEC2Q5JU85 1478 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 LRRC9Q6ZRR7 1453 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms