RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 SHANK2-AS3Q9BTD1 123 aa1.84□□□□□ -2.11
CDC42EP3-205ENST00000494083 PKD1P98161 4303 aa1.84□□□□□ -2.12
CDC42EP3-205ENST00000494083 TRAV8-2A0A0B4J237 113 aa1.84□□□□□ -2.12
CDC42EP3-205ENST00000494083 TMEM262E9PQX1 116 aa1.84□□□□□ -2.12
CDC42EP3-205ENST00000494083 TIMM17BO60830 172 aa1.84□□□□□ -2.12
CDC42EP3-205ENST00000494083 ZNF22P17026 224 aaPredicted RBP1.84□□□□□ -2.12
CDC42EP3-205ENST00000494083 CXCL5P42830 114 aa1.84□□□□□ -2.12
CDC42EP3-205ENST00000494083 S100A7AQ86SG5 101 aa1.84□□□□□ -2.12
CDC42EP3-205ENST00000494083 DOLPP1Q86YN1 238 aa1.84□□□□□ -2.12
CDC42EP3-205ENST00000494083 Q8N8P6 123 aa1.84□□□□□ -2.12
CDC42EP3-205ENST00000494083 OR10G6Q8NH81 332 aa1.84□□□□□ -2.12
CDC42EP3-205ENST00000494083 FLYWCH2Q96CP2 140 aaKnown RBP1.84□□□□□ -2.12
CDC42EP3-205ENST00000494083 CTSZQ9UBR2 303 aa1.84□□□□□ -2.12
CDC42EP3-205ENST00000494083 RPUSD1Q9UJJ7 312 aaKnown RBP1.84□□□□□ -2.12
CDC42EP3-205ENST00000494083 DNAH11Q96DT5 4516 aa1.84□□□□□ -2.12
CDC42EP3-205ENST00000494083 SPAG17Q6Q759 2223 aa1.84□□□□□ -2.12
CDC42EP3-205ENST00000494083 TRBV30A0A0K0K1B3 111 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 K7EIM0 57 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 IAPPP10997 89 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 SSR4P51571 173 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 C3AR1Q16581 482 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 CEACAM16Q2WEN9 425 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 C12orf74Q32Q52 190 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 MRPL51Q4U2R6 128 aaKnown RBP1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 FA2HQ7L5A8 372 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 FAM19A2Q8N3H0 131 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 ZADH2Q8N4Q0 377 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 SMCR5Q8TEV8 140 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 HSPB8Q9UJY1 196 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 VPREB3Q9UKI3 123 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 CACNA1AO00555 2505 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 IGLV11-55A0A075B6I3 123 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 IGHV1-18A0A0C4DH31 117 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 SDHAF1A6NFY7 115 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 C11orf86A6NJI1 115 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 CXCL13O43927 109 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 CA1P00915 261 aaPredicted RBP1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 NGFP01138 241 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 IGKV1-17P01599 117 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 HIST1H1EP10412 219 aaKnown RBP1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 TSPEAR-AS2P59090 65 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 MEF2CQ06413 473 aaPredicted RBP1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 DEFB110Q30KQ9 67 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 NSUN5P1Q3KNT7 163 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 TEN1Q86WV5 123 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 PDPNQ86YL7 162 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 PCP2Q8IVA1 136 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 OR2K2Q8NGT1 345 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 BORCS8Q96FH0 119 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 SPRR3Q9UBC9 169 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 CELA1Q9UNI1 258 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 ADGRG4Q8IZF6 3080 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 KMT2CQ8NEZ4 4911 aaKnown RBP1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 MED13Q9UHV7 2174 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 A0A0J9YY99 117 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 TMEM223A0PJW6 202 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 BCE1O60756 84 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 LY6G6DO95868 133 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 IGHV1-2P23083 117 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 ZNF80P51504 273 aaPredicted RBP1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 PLGLB1Q02325 96 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 C1orf158Q8N1D5 194 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 SLC25A29Q8N8R3 303 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 OR10D3Q8NH80 312 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 KIR2DL5BQ8NHK3 375 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 CCL13Q99616 98 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 SLC25A15Q9Y619 301 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 AGRNO00468 2067 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 TECTAO75443 2155 aa1.83□□□□□ -2.12
CDC42EP3-205ENST00000494083 CNTRLQ7Z7A1 2325 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 IGHV3OR16-10A0A075B7F0 116 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 IGHV1-69DA0A0B4J2H0 117 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 A0A0J9YXY3 114 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 F5H768 121 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 C19orf84I3L1E1 186 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 LEPROTL1O95214 131 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 IGHV1-69P01742 117 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 MT-ATP8P03928 68 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 NTF3P20783 257 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 RNASE4P34096 147 aaKnown RBP1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 WFDC2Q14508 124 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 ZNF876PQ49A33 203 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 PPP1R27Q86WC6 154 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 BORCS7Q96B45 105 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 PLEKHB2Q96CS7 222 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 RTL8AQ9BWD3 113 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 LENEPQ9Y5L5 61 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 RTTNQ86VV8 2226 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 A0A1W2PPI3 338 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 LYRM9A8MSI8 78 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 M0R1X1 148 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 PSMB8P28062 276 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 HTR1DP28221 377 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 POLR2KP53803 58 aaKnown RBP1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 SRSF9Q13242 221 aaKnown RBP eCLIP1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 SPANXN5Q5MJ07 72 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 GTF2H5Q6ZYL4 71 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 NOTCH2NLQ7Z3S9 236 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 VKORC1L1Q8N0U8 176 aa1.82□□□□□ -2.12
CDC42EP3-205ENST00000494083 OR10W1Q8NGF6 305 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms