RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, human

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-238	ENST00000493853	CDC34	P49427	236 aa	Predicted RBP	5.13	□□□□□ -1.59
RBM39-238	ENST00000493853	PPT1	P50897	306 aa		5.13	□□□□□ -1.59
RBM39-238	ENST00000493853	RAB2A	P61019	212 aa		5.13	□□□□□ -1.59
RBM39-238	ENST00000493853	TDRG1	Q3Y452	100 aa		5.13	□□□□□ -1.59
RBM39-238	ENST00000493853	C10orf126	Q8N4M7	172 aa		5.13	□□□□□ -1.59
RBM39-238	ENST00000493853	HSD17B11	Q8NBQ5	300 aa		5.13	□□□□□ -1.59
RBM39-238	ENST00000493853	SGK494	Q96LW2	274 aa		5.13	□□□□□ -1.59
RBM39-238	ENST00000493853	WFDC1	Q9HC57	220 aa		5.13	□□□□□ -1.59
RBM39-238	ENST00000493853	MSRB1	Q9NZV6	116 aa		5.13	□□□□□ -1.59
RBM39-238	ENST00000493853	PKD1	P98161	4303 aa		5.12	□□□□□ -1.59
RBM39-238	ENST00000493853	PCLO	Q9Y6V0	5065 aa		5.12	□□□□□ -1.59
RBM39-238	ENST00000493853	TRAV8-6	A0A0B4J262	113 aa		5.12	□□□□□ -1.59
RBM39-238	ENST00000493853	FBLL1	A6NHQ2	334 aa	Known RBP	5.12	□□□□□ -1.59
RBM39-238	ENST00000493853	TAAR5	O14804	337 aa		5.12	□□□□□ -1.59
RBM39-238	ENST00000493853	MB	P02144	154 aa		5.12	□□□□□ -1.59
RBM39-238	ENST00000493853	CRYGD	P07320	174 aa		5.12	□□□□□ -1.59
RBM39-238	ENST00000493853	PFN1	P07737	140 aa	Known RBP	5.12	□□□□□ -1.59
RBM39-238	ENST00000493853	ARL14EPL	P0DKL9	152 aa		5.12	□□□□□ -1.59
RBM39-238	ENST00000493853	GNG5	P63218	68 aa		5.12	□□□□□ -1.59
RBM39-238	ENST00000493853	ZNF876P	Q49A33	203 aa		5.12	□□□□□ -1.59
RBM39-238	ENST00000493853	ZFP69	Q49AA0	526 aa		5.12	□□□□□ -1.59
RBM39-238	ENST00000493853		Q6ZRN7	208 aa	Predicted RBP	5.12	□□□□□ -1.59
RBM39-238	ENST00000493853	WFDC10B	Q8IUB3	73 aa		5.12	□□□□□ -1.59
RBM39-238	ENST00000493853	C5orf17	Q8NAS9	161 aa		5.12	□□□□□ -1.59
RBM39-238	ENST00000493853	PRADC1	Q9BSG0	188 aa		5.12	□□□□□ -1.59
RBM39-238	ENST00000493853	KRTAP9-8	Q9BYQ0	159 aa		5.12	□□□□□ -1.59
RBM39-238	ENST00000493853	MED28	Q9H204	178 aa		5.12	□□□□□ -1.59
RBM39-238	ENST00000493853		A0A087WTM6	91 aa		5.11	□□□□□ -1.59
RBM39-238	ENST00000493853	IGHV3-38	A0A0C4DH36	116 aa		5.11	□□□□□ -1.59
RBM39-238	ENST00000493853	LOC100131303	A0A0U1RQF7	123 aa		5.11	□□□□□ -1.59
RBM39-238	ENST00000493853	EPM2A	B3EWF7	344 aa		5.11	□□□□□ -1.59
RBM39-238	ENST00000493853	CIDEA	O60543	219 aa		5.11	□□□□□ -1.59
RBM39-238	ENST00000493853	GCG	P01275	180 aa		5.11	□□□□□ -1.59
RBM39-238	ENST00000493853	TYMS	P04818	313 aa		5.11	□□□□□ -1.59
RBM39-238	ENST00000493853	DNAH10OS	P0CZ25	163 aa		5.11	□□□□□ -1.59
RBM39-238	ENST00000493853	GATA1	P15976	413 aa	Predicted RBP	5.11	□□□□□ -1.59
RBM39-238	ENST00000493853	SERF2	P84101	59 aa		5.11	□□□□□ -1.59
RBM39-238	ENST00000493853	FLI1	Q01543	452 aa	Predicted RBP	5.11	□□□□□ -1.59
RBM39-238	ENST00000493853	SMUG1	Q53HV7	270 aa		5.11	□□□□□ -1.59
RBM39-238	ENST00000493853	OR10J3	Q5JRS4	329 aa		5.11	□□□□□ -1.59
RBM39-238	ENST00000493853	PRNT	Q86SH4	94 aa		5.11	□□□□□ -1.59
RBM39-238	ENST00000493853	INO80E	Q8NBZ0	244 aa	Predicted RBP	5.11	□□□□□ -1.59
RBM39-238	ENST00000493853	ACTR3C	Q9C0K3	210 aa	Predicted RBP	5.11	□□□□□ -1.59
RBM39-238	ENST00000493853	TMEM167B	Q9NRX6	74 aa		5.11	□□□□□ -1.59
RBM39-238	ENST00000493853	ALG5	Q9Y673	324 aa		5.11	□□□□□ -1.59
RBM39-238	ENST00000493853	DNAH11	Q96DT5	4516 aa		5.11	□□□□□ -1.59
RBM39-238	ENST00000493853	DYNC1H1	Q14204	4646 aa	Known RBP	5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	BORCS7-ASMT	A0A0B4J1R7	106 aa		5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	IGHV3-73	A0A0B4J1V6	119 aa		5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	CXorf1	O96002	111 aa		5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	IFNA7	P01567	189 aa		5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	TCRA	P04437	139 aa		5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	STAG3L2	P0CL84	134 aa		5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	STAG3L3	P0CL85	134 aa		5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	S100A4	P26447	101 aa	Known RBP	5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	ATP6V0C	P27449	155 aa		5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	GCHFR	P30047	84 aa		5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	FUS	P35637	526 aa	Known RBP eCLIP	5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	RHOH	Q15669	191 aa		5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	SAPCD1	Q5SSQ6	148 aa		5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	CYB561D1	Q8N8Q1	229 aa		5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	SLC25A29	Q8N8R3	303 aa		5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	OR2G3	Q8NGZ4	309 aa		5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	FRZB	Q92765	325 aa		5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	TVP23C	Q96ET8	276 aa		5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	PSMG3	Q9BT73	122 aa	Predicted RBP	5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	SH3BGRL3	Q9H299	93 aa		5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	EPDR1	Q9UM22	224 aa		5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	TNFSF18	Q9UNG2	199 aa		5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	PSG8	Q9UQ74	426 aa		5.1	□□□□□ -1.59
RBM39-238	ENST00000493853	TRBV6-4	A0A1B0GX49	114 aa		5.09	□□□□□ -1.59
RBM39-238	ENST00000493853	TIRAP	P58753	221 aa		5.09	□□□□□ -1.59
RBM39-238	ENST00000493853	CFAP126	Q5VTH2	177 aa		5.09	□□□□□ -1.59
RBM39-238	ENST00000493853	AQP10	Q96PS8	301 aa		5.09	□□□□□ -1.59
RBM39-238	ENST00000493853		Q9HAA7	133 aa		5.09	□□□□□ -1.59
RBM39-238	ENST00000493853	BATF3	Q9NR55	127 aa		5.09	□□□□□ -1.59
RBM39-238	ENST00000493853	FABP5P3	A8MUU1	101 aa		5.08	□□□□□ -1.6
RBM39-238	ENST00000493853	RS1	O15537	224 aa		5.08	□□□□□ -1.6
RBM39-238	ENST00000493853	IGHV3-30	P01768	117 aa		5.08	□□□□□ -1.6
RBM39-238	ENST00000493853	IGHV3-33	P01772	117 aa		5.08	□□□□□ -1.6
RBM39-238	ENST00000493853	IGHV3-30-3	P0DP02	117 aa		5.08	□□□□□ -1.6
RBM39-238	ENST00000493853	IGHV3-30-5	P0DP03	117 aa		5.08	□□□□□ -1.6
RBM39-238	ENST00000493853	MGST1	P10620	155 aa	Known RBP	5.08	□□□□□ -1.6
RBM39-238	ENST00000493853	ZNF80	P51504	273 aa	Predicted RBP	5.08	□□□□□ -1.6
RBM39-238	ENST00000493853	LGALSL	Q3ZCW2	172 aa	Predicted RBP	5.08	□□□□□ -1.6
RBM39-238	ENST00000493853	LINC01556	Q5JQF7	62 aa		5.08	□□□□□ -1.6
RBM39-238	ENST00000493853	SUMO4	Q6EEV6	95 aa		5.08	□□□□□ -1.6
RBM39-238	ENST00000493853	TMEM75	Q8N9X5	138 aa		5.08	□□□□□ -1.6
RBM39-238	ENST00000493853	ATP6V0E2	Q8NHE4	81 aa		5.08	□□□□□ -1.6
RBM39-238	ENST00000493853	TM2D2	Q9BX73	214 aa		5.08	□□□□□ -1.6
RBM39-238	ENST00000493853	GTSF1L	Q9H1H1	148 aa		5.08	□□□□□ -1.6
RBM39-238	ENST00000493853	MUC4	Q99102	2169 aa		5.08	□□□□□ -1.6
RBM39-238	ENST00000493853	RYR1	P21817	5038 aa		5.07	□□□□□ -1.6
RBM39-238	ENST00000493853	FXYD6-FXYD2	A0A087WZ82	144 aa		5.07	□□□□□ -1.6
RBM39-238	ENST00000493853	IGLV5-52	A0A0A0MRZ9	124 aa		5.07	□□□□□ -1.6
RBM39-238	ENST00000493853	TRAV34	A0A0B4J273	112 aa		5.07	□□□□□ -1.6
RBM39-238	ENST00000493853		A0A1W2PRE2	83 aa		5.07	□□□□□ -1.6
RBM39-238	ENST00000493853	PGPEP1L	A6NFU8	196 aa		5.07	□□□□□ -1.6
RBM39-238	ENST00000493853		A8MWV9	139 aa		5.07	□□□□□ -1.6
RBM39-238	ENST00000493853	IBA57-AS1	B1ANH7	110 aa		5.07	□□□□□ -1.6

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