RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 M0R2P5 195 aa11.23□□□□□ -0.61
HPS4-216ENST00000493455 M0R381 172 aa11.23□□□□□ -0.61
HPS4-216ENST00000493455 PNRC1Q12796 327 aaPredicted RBP11.23□□□□□ -0.61
HPS4-216ENST00000493455 DAZ2Q13117 558 aaKnown RBP11.23□□□□□ -0.61
HPS4-216ENST00000493455 SPINK4O60575 86 aa11.22□□□□□ -0.61
HPS4-216ENST00000493455 IGHV3-53P01767 116 aa11.22□□□□□ -0.61
HPS4-216ENST00000493455 NDUFA5Q16718 116 aa11.22□□□□□ -0.61
HPS4-216ENST00000493455 C12orf74Q32Q52 190 aa11.22□□□□□ -0.61
HPS4-216ENST00000493455 Q6ZTC4 211 aa11.22□□□□□ -0.61
HPS4-216ENST00000493455 FER1L6-AS1Q8NA97 138 aa11.22□□□□□ -0.61
HPS4-216ENST00000493455 IL36BQ9NZH7 164 aa11.22□□□□□ -0.61
HPS4-216ENST00000493455 A8MWL6 223 aa11.21□□□□□ -0.61
HPS4-216ENST00000493455 APOC3P02656 99 aa11.21□□□□□ -0.61
HPS4-216ENST00000493455 CXCL1P09341 107 aa11.21□□□□□ -0.61
HPS4-216ENST00000493455 RNF212Q495C1 297 aa11.21□□□□□ -0.61
HPS4-216ENST00000493455 ZNF876PQ49A33 203 aa11.21□□□□□ -0.61
HPS4-216ENST00000493455 ZNF575Q86XF7 245 aa11.21□□□□□ -0.61
HPS4-216ENST00000493455 OR10AG1Q8NH19 301 aa11.21□□□□□ -0.61
HPS4-216ENST00000493455 V9GYV3 84 aa11.21□□□□□ -0.61
HPS4-216ENST00000493455 DNLZQ5SXM8 178 aa11.2□□□□□ -0.62
HPS4-216ENST00000493455 SPANXN1Q5VSR9 72 aa11.2□□□□□ -0.62
HPS4-216ENST00000493455 LYZL1Q6UWQ5 148 aa11.2□□□□□ -0.62
HPS4-216ENST00000493455 SYT8Q8NBV8 401 aa11.2□□□□□ -0.62
HPS4-216ENST00000493455 PGLYRP4Q96LB8 373 aa11.2□□□□□ -0.62
HPS4-216ENST00000493455 MT-ND4LP03901 98 aa11.19□□□□□ -0.62
HPS4-216ENST00000493455 IGLC6P0CF74 106 aa11.19□□□□□ -0.62
HPS4-216ENST00000493455 LGALS9BQ3B8N2 356 aa11.19□□□□□ -0.62
HPS4-216ENST00000493455 ZFAND6Q6FIF0 208 aa11.19□□□□□ -0.62
HPS4-216ENST00000493455 ZFP82Q8N141 532 aa11.19□□□□□ -0.62
HPS4-216ENST00000493455 WWC2-AS2Q96NR7 200 aa11.19□□□□□ -0.62
HPS4-216ENST00000493455 CARHSP1Q9Y2V2 147 aaKnown RBP11.19□□□□□ -0.62
HPS4-216ENST00000493455 IGHV3-73A0A0B4J1V6 119 aa11.18□□□□□ -0.62
HPS4-216ENST00000493455 SNAI2O43623 268 aa11.18□□□□□ -0.62
HPS4-216ENST00000493455 MED14OSP0DP75 135 aa11.18□□□□□ -0.62
HPS4-216ENST00000493455 CT83Q5H943 113 aa11.18□□□□□ -0.62
HPS4-216ENST00000493455 C10orf91Q5T1B1 145 aa11.18□□□□□ -0.62
HPS4-216ENST00000493455 DMRTA1Q5VZB9 504 aa11.18□□□□□ -0.62
HPS4-216ENST00000493455 TSKUQ8WUA8 353 aa11.18□□□□□ -0.62
HPS4-216ENST00000493455 GTSF1Q8WW33 167 aa11.18□□□□□ -0.62
HPS4-216ENST00000493455 STAB2Q8WWQ8 2551 aa11.18□□□□□ -0.62
HPS4-216ENST00000493455 A0A1W2PPQ1 181 aa11.17□□□□□ -0.62
HPS4-216ENST00000493455 F5H768 121 aa11.17□□□□□ -0.62
HPS4-216ENST00000493455 PPP1R2P9O14990 202 aa11.17□□□□□ -0.62
HPS4-216ENST00000493455 ATP5G1P05496 136 aa11.17□□□□□ -0.62
HPS4-216ENST00000493455 OR5AL1P0C617 328 aa11.17□□□□□ -0.62
HPS4-216ENST00000493455 OR4C5Q8NGB2 326 aa11.17□□□□□ -0.62
HPS4-216ENST00000493455 RASL10AQ92737 203 aa11.17□□□□□ -0.62
HPS4-216ENST00000493455 BORCS7Q96B45 105 aa11.17□□□□□ -0.62
HPS4-216ENST00000493455 JPT2Q9H910 190 aa11.17□□□□□ -0.62
HPS4-216ENST00000493455 SCRT2Q9NQ03 307 aa11.17□□□□□ -0.62
HPS4-216ENST00000493455 DEFB131BA0A096LNP1 70 aa11.16□□□□□ -0.62
HPS4-216ENST00000493455 HIGD1CA8MV81 97 aa11.16□□□□□ -0.62
HPS4-216ENST00000493455 FAM74A4Q5TZK3 123 aa11.16□□□□□ -0.62
HPS4-216ENST00000493455 LINC00612Q8N6U2 182 aa11.16□□□□□ -0.62
HPS4-216ENST00000493455 CLRN3Q8NCR9 226 aa11.16□□□□□ -0.62
HPS4-216ENST00000493455 PHLDA1Q8WV24 401 aaPredicted RBP11.16□□□□□ -0.62
HPS4-216ENST00000493455 ANAPC16Q96DE5 110 aa11.16□□□□□ -0.62
HPS4-216ENST00000493455 SSBP4Q9BWG4 385 aaPredicted RBP11.16□□□□□ -0.62
HPS4-216ENST00000493455 RPS10P5Q9NQ39 176 aa11.16□□□□□ -0.62
HPS4-216ENST00000493455 NACAE9PAV3 2078 aa11.16□□□□□ -0.62
HPS4-216ENST00000493455 A0A087WWL8 130 aa11.15□□□□□ -0.62
HPS4-216ENST00000493455 TRAV10A0A0B4J240 114 aa11.15□□□□□ -0.62
HPS4-216ENST00000493455 CACNG7P62955 275 aa11.15□□□□□ -0.62
HPS4-216ENST00000493455 ZNF479Q96JC4 524 aa11.15□□□□□ -0.62
HPS4-216ENST00000493455 MSRB1Q9NZV6 116 aa11.15□□□□□ -0.62
HPS4-216ENST00000493455 TRAV4A0A0B4J268 109 aa11.14□□□□□ -0.63
HPS4-216ENST00000493455 TRGV4A0A0C4DH28 118 aa11.14□□□□□ -0.63
HPS4-216ENST00000493455 C7orf77A4D0Y5 90 aa11.14□□□□□ -0.63
HPS4-216ENST00000493455 F2Z2F3 143 aa11.14□□□□□ -0.63
HPS4-216ENST00000493455 CTRLP40313 264 aa11.14□□□□□ -0.63
HPS4-216ENST00000493455 TWIST1Q15672 202 aa11.14□□□□□ -0.63
HPS4-216ENST00000493455 SVBPQ8N300 66 aa11.14□□□□□ -0.63
HPS4-216ENST00000493455 MUC7Q8TAX7 377 aa11.14□□□□□ -0.63
HPS4-216ENST00000493455 GFRA4Q9GZZ7 299 aa11.14□□□□□ -0.63
HPS4-216ENST00000493455 NAT8BQ9UHF3 227 aa11.14□□□□□ -0.63
HPS4-216ENST00000493455 RS1O15537 224 aa11.13□□□□□ -0.63
HPS4-216ENST00000493455 SNAPINO95295 136 aa11.13□□□□□ -0.63
HPS4-216ENST00000493455 NTF3P20783 257 aa11.13□□□□□ -0.63
HPS4-216ENST00000493455 CFAP126Q5VTH2 177 aa11.13□□□□□ -0.63
HPS4-216ENST00000493455 POM121L12Q8N7R1 296 aa11.13□□□□□ -0.63
HPS4-216ENST00000493455 NUP35Q8NFH5 326 aa11.13□□□□□ -0.63
HPS4-216ENST00000493455 PTH2Q96A98 100 aa11.13□□□□□ -0.63
HPS4-216ENST00000493455 SAMD10Q9BYL1 202 aa11.13□□□□□ -0.63
HPS4-216ENST00000493455 A0A0J9YY99 117 aa11.12□□□□□ -0.63
HPS4-216ENST00000493455 SMIM27A0A1W2PRY6 76 aa11.12□□□□□ -0.63
HPS4-216ENST00000493455 A8MWV9 139 aa11.12□□□□□ -0.63
HPS4-216ENST00000493455 MGPP08493 103 aa11.12□□□□□ -0.63
HPS4-216ENST00000493455 HOXA5P20719 270 aa11.12□□□□□ -0.63
HPS4-216ENST00000493455 FAM3BP58499 235 aaPredicted RBP11.12□□□□□ -0.63
HPS4-216ENST00000493455 C14orf178Q8N769 122 aaPredicted RBP11.12□□□□□ -0.63
HPS4-216ENST00000493455 AP1S3Q96PC3 154 aa11.12□□□□□ -0.63
HPS4-216ENST00000493455 A0A1B0GUT8 65 aa11.11□□□□□ -0.63
HPS4-216ENST00000493455 FAM231BA6NCW3 169 aa11.11□□□□□ -0.63
HPS4-216ENST00000493455 IGLL5B9A064 214 aa11.11□□□□□ -0.63
HPS4-216ENST00000493455 NXPH4O95158 308 aa11.11□□□□□ -0.63
HPS4-216ENST00000493455 SMIM17P0DL12 118 aa11.11□□□□□ -0.63
HPS4-216ENST00000493455 RHEBQ15382 184 aa11.11□□□□□ -0.63
HPS4-216ENST00000493455 MRPL54Q6P161 138 aaKnown RBP11.11□□□□□ -0.63
HPS4-216ENST00000493455 CTDSP1Q9GZU7 261 aa11.11□□□□□ -0.63
HPS4-216ENST00000493455 TRGC1P0CF51 173 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms