RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 STARD9Q9P2P6 4700 aa12.28□□□□□ -0.44
LIME1-208ENST00000493265 GAGE12BA1L429 117 aa12.27□□□□□ -0.45
LIME1-208ENST00000493265 GAGE7O76087 117 aa12.27□□□□□ -0.45
LIME1-208ENST00000493265 APOC3P02656 99 aa12.27□□□□□ -0.45
LIME1-208ENST00000493265 GAGE12FP0CL80 117 aa12.27□□□□□ -0.45
LIME1-208ENST00000493265 GAGE12GP0CL81 117 aa12.27□□□□□ -0.45
LIME1-208ENST00000493265 GAGE12IP0CL82 117 aa12.27□□□□□ -0.45
LIME1-208ENST00000493265 ZFAND6Q6FIF0 208 aa12.27□□□□□ -0.45
LIME1-208ENST00000493265 Q6ZTI0 123 aa12.27□□□□□ -0.45
LIME1-208ENST00000493265 IL17DQ8TAD2 202 aa12.27□□□□□ -0.45
LIME1-208ENST00000493265 C11orf45Q8TAV5 145 aa12.27□□□□□ -0.45
LIME1-208ENST00000493265 C9orf85Q96MD7 179 aa12.27□□□□□ -0.45
LIME1-208ENST00000493265 SPXQ9BT56 116 aa12.27□□□□□ -0.45
LIME1-208ENST00000493265 LCE6AA0A183 80 aa12.26□□□□□ -0.45
LIME1-208ENST00000493265 LYRM9A8MSI8 78 aa12.26□□□□□ -0.45
LIME1-208ENST00000493265 NANOS2P60321 138 aaKnown RBP12.26□□□□□ -0.45
LIME1-208ENST00000493265 DAZ2Q13117 558 aaKnown RBP12.26□□□□□ -0.45
LIME1-208ENST00000493265 RNF212Q495C1 297 aa12.26□□□□□ -0.45
LIME1-208ENST00000493265 C10orf91Q5T1B1 145 aa12.26□□□□□ -0.45
LIME1-208ENST00000493265 FER1L6-AS1Q8NA97 138 aa12.26□□□□□ -0.45
LIME1-208ENST00000493265 IL36BQ9NZH7 164 aa12.26□□□□□ -0.45
LIME1-208ENST00000493265 CARHSP1Q9Y2V2 147 aaKnown RBP12.26□□□□□ -0.45
LIME1-208ENST00000493265 PHLDA3Q9Y5J5 127 aa12.26□□□□□ -0.45
LIME1-208ENST00000493265 V9GYV3 84 aa12.26□□□□□ -0.45
LIME1-208ENST00000493265 A8MWL6 223 aa12.25□□□□□ -0.45
LIME1-208ENST00000493265 M0R2P5 195 aa12.25□□□□□ -0.45
LIME1-208ENST00000493265 DAD1P61803 113 aa12.25□□□□□ -0.45
LIME1-208ENST00000493265 DNLZQ5SXM8 178 aa12.25□□□□□ -0.45
LIME1-208ENST00000493265 EDA2RQ9HAV5 297 aa12.25□□□□□ -0.45
LIME1-208ENST00000493265 CSMD3Q7Z407 3707 aa12.24□□□□□ -0.45
LIME1-208ENST00000493265 M0R381 172 aa12.24□□□□□ -0.45
LIME1-208ENST00000493265 SPINK4O60575 86 aa12.24□□□□□ -0.45
LIME1-208ENST00000493265 MT-ND4LP03901 98 aa12.24□□□□□ -0.45
LIME1-208ENST00000493265 CXCL1P09341 107 aa12.24□□□□□ -0.45
LIME1-208ENST00000493265 ZNF876PQ49A33 203 aa12.24□□□□□ -0.45
LIME1-208ENST00000493265 TRGV2A0A075B6R0 118 aa12.23□□□□□ -0.45
LIME1-208ENST00000493265 IGLC6P0CF74 106 aa12.23□□□□□ -0.45
LIME1-208ENST00000493265 HTN3P15516 51 aa12.23□□□□□ -0.45
LIME1-208ENST00000493265 C12orf74Q32Q52 190 aa12.23□□□□□ -0.45
LIME1-208ENST00000493265 CT83Q5H943 113 aa12.23□□□□□ -0.45
LIME1-208ENST00000493265 LYZL1Q6UWQ5 148 aa12.23□□□□□ -0.45
LIME1-208ENST00000493265 OR10AG1Q8NH19 301 aa12.23□□□□□ -0.45
LIME1-208ENST00000493265 TSKUQ8WUA8 353 aa12.23□□□□□ -0.45
LIME1-208ENST00000493265 GTSF1Q8WW33 167 aa12.23□□□□□ -0.45
LIME1-208ENST00000493265 PGLYRP4Q96LB8 373 aa12.23□□□□□ -0.45
LIME1-208ENST00000493265 TEX48A0A1B0GUV7 120 aa12.22□□□□□ -0.45
LIME1-208ENST00000493265 PPP1R2P9O14990 202 aa12.22□□□□□ -0.45
LIME1-208ENST00000493265 SPANXN1Q5VSR9 72 aa12.22□□□□□ -0.45
LIME1-208ENST00000493265 SYT8Q8NBV8 401 aa12.22□□□□□ -0.45
LIME1-208ENST00000493265 CLRN3Q8NCR9 226 aa12.22□□□□□ -0.45
LIME1-208ENST00000493265 SCRT2Q9NQ03 307 aa12.22□□□□□ -0.45
LIME1-208ENST00000493265 A0A1W2PPQ1 181 aa12.21□□□□□ -0.45
LIME1-208ENST00000493265 SNAI2O43623 268 aa12.21□□□□□ -0.45
LIME1-208ENST00000493265 IGHV3-53P01767 116 aa12.21□□□□□ -0.45
LIME1-208ENST00000493265 OR5AL1P0C617 328 aa12.21□□□□□ -0.45
LIME1-208ENST00000493265 MED14OSP0DP75 135 aa12.21□□□□□ -0.45
LIME1-208ENST00000493265 LGALS9BQ3B8N2 356 aa12.21□□□□□ -0.45
LIME1-208ENST00000493265 DMRTA1Q5VZB9 504 aa12.21□□□□□ -0.45
LIME1-208ENST00000493265 Q6ZTC4 211 aa12.21□□□□□ -0.45
LIME1-208ENST00000493265 ZFP82Q8N141 532 aa12.21□□□□□ -0.45
LIME1-208ENST00000493265 HIGD1CA8MV81 97 aa12.2□□□□□ -0.46
LIME1-208ENST00000493265 SVBPQ8N300 66 aa12.2□□□□□ -0.46
LIME1-208ENST00000493265 ANAPC16Q96DE5 110 aa12.2□□□□□ -0.46
LIME1-208ENST00000493265 SSBP4Q9BWG4 385 aaPredicted RBP12.2□□□□□ -0.46
LIME1-208ENST00000493265 RPS10P5Q9NQ39 176 aa12.2□□□□□ -0.46
LIME1-208ENST00000493265 HYDINQ4G0P3 5121 aa12.2□□□□□ -0.46
LIME1-208ENST00000493265 C7orf77A4D0Y5 90 aa12.19□□□□□ -0.46
LIME1-208ENST00000493265 F2Z2F3 143 aa12.19□□□□□ -0.46
LIME1-208ENST00000493265 LINC00612Q8N6U2 182 aa12.19□□□□□ -0.46
LIME1-208ENST00000493265 RASL10AQ92737 203 aa12.19□□□□□ -0.46
LIME1-208ENST00000493265 JPT2Q9H910 190 aa12.19□□□□□ -0.46
LIME1-208ENST00000493265 MUC4Q99102 2169 aa12.19□□□□□ -0.46
LIME1-208ENST00000493265 SNAPINO95295 136 aa12.18□□□□□ -0.46
LIME1-208ENST00000493265 CTRLP40313 264 aa12.18□□□□□ -0.46
LIME1-208ENST00000493265 OR4C5Q8NGB2 326 aa12.18□□□□□ -0.46
LIME1-208ENST00000493265 BORCS7Q96B45 105 aa12.18□□□□□ -0.46
LIME1-208ENST00000493265 GFRA4Q9GZZ7 299 aa12.18□□□□□ -0.46
LIME1-208ENST00000493265 MSRB1Q9NZV6 116 aa12.18□□□□□ -0.46
LIME1-208ENST00000493265 NAT8BQ9UHF3 227 aa12.18□□□□□ -0.46
LIME1-208ENST00000493265 IGHV3-73A0A0B4J1V6 119 aa12.17□□□□□ -0.46
LIME1-208ENST00000493265 SMIM27A0A1W2PRY6 76 aa12.17□□□□□ -0.46
LIME1-208ENST00000493265 CACNG7P62955 275 aa12.17□□□□□ -0.46
LIME1-208ENST00000493265 RHEBQ15382 184 aa12.17□□□□□ -0.46
LIME1-208ENST00000493265 TWIST1Q15672 202 aa12.17□□□□□ -0.46
LIME1-208ENST00000493265 NUP35Q8NFH5 326 aa12.17□□□□□ -0.46
LIME1-208ENST00000493265 A0A087WWL8 130 aa12.16□□□□□ -0.46
LIME1-208ENST00000493265 ATP5G1P05496 136 aa12.16□□□□□ -0.46
LIME1-208ENST00000493265 NTF3P20783 257 aa12.16□□□□□ -0.46
LIME1-208ENST00000493265 FAM3BP58499 235 aaPredicted RBP12.16□□□□□ -0.46
LIME1-208ENST00000493265 PTH2Q96A98 100 aa12.16□□□□□ -0.46
LIME1-208ENST00000493265 ZNF479Q96JC4 524 aa12.16□□□□□ -0.46
LIME1-208ENST00000493265 CTDSP1Q9GZU7 261 aa12.16□□□□□ -0.46
LIME1-208ENST00000493265 FAM231BA6NCW3 169 aa12.15□□□□□ -0.46
LIME1-208ENST00000493265 F5H768 121 aa12.15□□□□□ -0.46
LIME1-208ENST00000493265 RS1O15537 224 aa12.15□□□□□ -0.46
LIME1-208ENST00000493265 NXPH4O95158 308 aa12.15□□□□□ -0.46
LIME1-208ENST00000493265 FOXA3P55318 350 aaPredicted RBP12.15□□□□□ -0.46
LIME1-208ENST00000493265 FAM74A4Q5TZK3 123 aa12.15□□□□□ -0.46
LIME1-208ENST00000493265 CFAP126Q5VTH2 177 aa12.15□□□□□ -0.46
LIME1-208ENST00000493265 POM121L12Q8N7R1 296 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms