RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 MSRB1Q9NZV6 116 aa9.32□□□□□ -0.92
IRF1-210ENST00000493208 B4DEV8 164 aa9.31□□□□□ -0.92
IRF1-210ENST00000493208 RS1O15537 224 aa9.31□□□□□ -0.92
IRF1-210ENST00000493208 IGLV2-11P01706 119 aa9.31□□□□□ -0.92
IRF1-210ENST00000493208 CRYGDP07320 174 aa9.31□□□□□ -0.92
IRF1-210ENST00000493208 DNAH10OSP0CZ25 163 aa9.31□□□□□ -0.92
IRF1-210ENST00000493208 AKR1C3P42330 323 aa9.31□□□□□ -0.92
IRF1-210ENST00000493208 FGF8P55075 233 aaPredicted RBP9.31□□□□□ -0.92
IRF1-210ENST00000493208 OR10J3Q5JRS4 329 aa9.31□□□□□ -0.92
IRF1-210ENST00000493208 CFAP126Q5VTH2 177 aa9.31□□□□□ -0.92
IRF1-210ENST00000493208 Q86TA4 180 aa9.31□□□□□ -0.92
IRF1-210ENST00000493208 ZNF575Q86XF7 245 aa9.31□□□□□ -0.92
IRF1-210ENST00000493208 KCNRGQ8N5I3 272 aa9.31□□□□□ -0.92
IRF1-210ENST00000493208 ZNF471Q9BX82 626 aaPredicted RBP9.31□□□□□ -0.92
IRF1-210ENST00000493208 IL36BQ9NZH7 164 aa9.31□□□□□ -0.92
IRF1-210ENST00000493208 DNAH2Q9P225 4427 aa9.31□□□□□ -0.92
IRF1-210ENST00000493208 IGHV3-38A0A0C4DH36 116 aa9.3□□□□□ -0.92
IRF1-210ENST00000493208 PSCAO43653 123 aa9.3□□□□□ -0.92
IRF1-210ENST00000493208 ZNF80P51504 273 aaPredicted RBP9.3□□□□□ -0.92
IRF1-210ENST00000493208 ZNF506Q5JVG8 444 aa9.3□□□□□ -0.92
IRF1-210ENST00000493208 SLC25A29Q8N8R3 303 aa9.3□□□□□ -0.92
IRF1-210ENST00000493208 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.3□□□□□ -0.92
IRF1-210ENST00000493208 OR11H4Q8NGC9 324 aa9.3□□□□□ -0.92
IRF1-210ENST00000493208 PHLDA3Q9Y5J5 127 aa9.3□□□□□ -0.92
IRF1-210ENST00000493208 A0A087WWC5 75 aa9.29□□□□□ -0.92
IRF1-210ENST00000493208 TRAV34A0A0B4J273 112 aa9.29□□□□□ -0.92
IRF1-210ENST00000493208 TRBV6-1A0A0K0K1D8 114 aa9.29□□□□□ -0.92
IRF1-210ENST00000493208 TPT1P13693 172 aaKnown RBP9.29□□□□□ -0.92
IRF1-210ENST00000493208 ZNF726P1Q15940 193 aa9.29□□□□□ -0.92
IRF1-210ENST00000493208 ATP6V0E2Q8NHE4 81 aa9.29□□□□□ -0.92
IRF1-210ENST00000493208 SFT2D1Q8WV19 159 aa9.29□□□□□ -0.92
IRF1-210ENST00000493208 KRTAP1-5Q9BYS1 174 aa9.29□□□□□ -0.92
IRF1-210ENST00000493208 FAT2Q9NYQ8 4349 aa9.29□□□□□ -0.92
IRF1-210ENST00000493208 BCL2L11O43521 198 aa9.28□□□□□ -0.92
IRF1-210ENST00000493208 TOR2AQ5JU69 321 aa9.28□□□□□ -0.92
IRF1-210ENST00000493208 LELP1Q5T871 98 aa9.28□□□□□ -0.92
IRF1-210ENST00000493208 KCNIP4Q6PIL6 250 aa9.28□□□□□ -0.92
IRF1-210ENST00000493208 FAM213BQ8TBF2 198 aa9.28□□□□□ -0.92
IRF1-210ENST00000493208 GTSF1LQ9H1H1 148 aa9.28□□□□□ -0.92
IRF1-210ENST00000493208 H2AFB1P0C5Y9 115 aa9.27□□□□□ -0.93
IRF1-210ENST00000493208 RNASE3P12724 160 aaKnown RBP9.27□□□□□ -0.93
IRF1-210ENST00000493208 RAB5CP51148 216 aa9.27□□□□□ -0.93
IRF1-210ENST00000493208 LINC01556Q5JQF7 62 aa9.27□□□□□ -0.93
IRF1-210ENST00000493208 COX8CQ7Z4L0 72 aa9.27□□□□□ -0.93
IRF1-210ENST00000493208 ZFP82Q8N141 532 aa9.27□□□□□ -0.93
IRF1-210ENST00000493208 LINC00479Q96M42 142 aa9.27□□□□□ -0.93
IRF1-210ENST00000493208 CYTL1Q9NRR1 136 aa9.27□□□□□ -0.93
IRF1-210ENST00000493208 URGCP-MRPS24S4R325 110 aa9.27□□□□□ -0.93
IRF1-210ENST00000493208 IGHV3-73A0A0B4J1V6 119 aa9.26□□□□□ -0.93
IRF1-210ENST00000493208 PGPEP1LA6NFU8 196 aa9.26□□□□□ -0.93
IRF1-210ENST00000493208 H3BVH4 76 aa9.26□□□□□ -0.93
IRF1-210ENST00000493208 SH2D1AO60880 128 aa9.26□□□□□ -0.93
IRF1-210ENST00000493208 LTAP01374 205 aa9.26□□□□□ -0.93
IRF1-210ENST00000493208 DNLZQ5SXM8 178 aa9.26□□□□□ -0.93
IRF1-210ENST00000493208 WFDC10BQ8IUB3 73 aa9.26□□□□□ -0.93
IRF1-210ENST00000493208 TM2D2Q9BX73 214 aa9.26□□□□□ -0.93
IRF1-210ENST00000493208 PARLQ9H300 379 aa9.26□□□□□ -0.93
IRF1-210ENST00000493208 MANBALQ9NQG1 85 aa9.26□□□□□ -0.93
IRF1-210ENST00000493208 C11orf21Q9P2W6 132 aa9.26□□□□□ -0.93
IRF1-210ENST00000493208 DNAH17Q9UFH2 4485 aa9.26□□□□□ -0.93
IRF1-210ENST00000493208 IGKV3D-20A0A0C4DH25 116 aa9.25□□□□□ -0.93
IRF1-210ENST00000493208 KRBOX1C9JBD0 128 aa9.25□□□□□ -0.93
IRF1-210ENST00000493208 M0R036 132 aa9.25□□□□□ -0.93
IRF1-210ENST00000493208 PAGE4O60829 102 aa9.25□□□□□ -0.93
IRF1-210ENST00000493208 LINC01559Q495D7 138 aa9.25□□□□□ -0.93
IRF1-210ENST00000493208 MBD3L1Q8WWY6 194 aa9.25□□□□□ -0.93
IRF1-210ENST00000493208 ZC2HC1AQ96GY0 325 aa9.25□□□□□ -0.93
IRF1-210ENST00000493208 G3V3Q6 166 aa9.24□□□□□ -0.93
IRF1-210ENST00000493208 IFNA1P01562 189 aa9.24□□□□□ -0.93
IRF1-210ENST00000493208 ARMS2P0C7Q2 107 aa9.24□□□□□ -0.93
IRF1-210ENST00000493208 LAGE3Q14657 143 aa9.24□□□□□ -0.93
IRF1-210ENST00000493208 ZNF674Q2M3X9 581 aa9.24□□□□□ -0.93
IRF1-210ENST00000493208 COX11Q9Y6N1 276 aa9.24□□□□□ -0.93
IRF1-210ENST00000493208 TRAV8-3A0A0A6YYJ7 113 aa9.23□□□□□ -0.93
IRF1-210ENST00000493208 LOC100131303A0A0U1RQF7 123 aa9.23□□□□□ -0.93
IRF1-210ENST00000493208 SMLR1H3BR10 107 aa9.23□□□□□ -0.93
IRF1-210ENST00000493208 CXCL1P09341 107 aa9.23□□□□□ -0.93
IRF1-210ENST00000493208 FAM74A4Q5TZK3 123 aa9.23□□□□□ -0.93
IRF1-210ENST00000493208 Q6ZRN7 208 aaPredicted RBP9.23□□□□□ -0.93
IRF1-210ENST00000493208 BAGE2Q86Y30 109 aa9.23□□□□□ -0.93
IRF1-210ENST00000493208 MAPKAPK5-AS1Q8N8E1 139 aa9.23□□□□□ -0.93
IRF1-210ENST00000493208 RMI2Q96E14 147 aa9.23□□□□□ -0.93
IRF1-210ENST00000493208 BIN3Q9NQY0 253 aa9.23□□□□□ -0.93
IRF1-210ENST00000493208 PKHD1P08F94 4074 aa9.22□□□□□ -0.93
IRF1-210ENST00000493208 HERC2O95714 4834 aa9.22□□□□□ -0.93
IRF1-210ENST00000493208 A0A087WTM6 91 aa9.22□□□□□ -0.93
IRF1-210ENST00000493208 TRBV10-1A0A0K0K1A3 114 aa9.22□□□□□ -0.93
IRF1-210ENST00000493208 IBA57-AS1B1ANH7 110 aa9.22□□□□□ -0.93
IRF1-210ENST00000493208 M0R381 172 aa9.22□□□□□ -0.93
IRF1-210ENST00000493208 RPL36AP83881 106 aaKnown RBP9.22□□□□□ -0.93
IRF1-210ENST00000493208 ELOBQ15370 118 aa9.22□□□□□ -0.93
IRF1-210ENST00000493208 TMUB2Q71RG4 321 aa9.22□□□□□ -0.93
IRF1-210ENST00000493208 NTN5Q8WTR8 489 aaPredicted RBP9.22□□□□□ -0.93
IRF1-210ENST00000493208 RPL36ALQ969Q0 106 aaKnown RBP9.22□□□□□ -0.93
IRF1-210ENST00000493208 DAZAP1Q96EP5 407 aaKnown RBP9.22□□□□□ -0.93
IRF1-210ENST00000493208 DNAH11Q96DT5 4516 aa9.22□□□□□ -0.93
IRF1-210ENST00000493208 XKRY2A2RUG3 117 aa9.21□□□□□ -0.94
IRF1-210ENST00000493208 GAGE12JA6NER3 117 aa9.21□□□□□ -0.94
IRF1-210ENST00000493208 SMIM17P0DL12 118 aa9.21□□□□□ -0.94
IRF1-210ENST00000493208 TAGLN2P37802 199 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms