RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 PRADC1Q9BSG0 188 aa7.8□□□□□ -1.16
GPNMB-214ENST00000492858 AAMDCQ9H7C9 122 aa7.8□□□□□ -1.16
GPNMB-214ENST00000492858 IGKV2D-24A0A075B6R9 120 aa7.79□□□□□ -1.16
GPNMB-214ENST00000492858 FBLL1A6NHQ2 334 aaKnown RBP7.79□□□□□ -1.16
GPNMB-214ENST00000492858 PYYP10082 97 aa7.79□□□□□ -1.16
GPNMB-214ENST00000492858 FGF7P21781 194 aa7.79□□□□□ -1.16
GPNMB-214ENST00000492858 RHOHQ15669 191 aa7.79□□□□□ -1.16
GPNMB-214ENST00000492858 RMI2Q96E14 147 aa7.79□□□□□ -1.16
GPNMB-214ENST00000492858 PFDN5Q99471 154 aa7.79□□□□□ -1.16
GPNMB-214ENST00000492858 SMIM3Q9BZL3 60 aa7.79□□□□□ -1.16
GPNMB-214ENST00000492858 TMEM14CQ9P0S9 112 aa7.79□□□□□ -1.16
GPNMB-214ENST00000492858 NAGKQ9UJ70 344 aa7.79□□□□□ -1.16
GPNMB-214ENST00000492858 TRAV8-1A0A0A6YYK1 113 aa7.78□□□□□ -1.16
GPNMB-214ENST00000492858 TRBV7-9A0A0J9YWB2 115 aa7.78□□□□□ -1.16
GPNMB-214ENST00000492858 PFDN1O60925 122 aa7.78□□□□□ -1.16
GPNMB-214ENST00000492858 ATP6V0CP27449 155 aa7.78□□□□□ -1.16
GPNMB-214ENST00000492858 SERF2P84101 59 aa7.78□□□□□ -1.16
GPNMB-214ENST00000492858 RAB31Q13636 194 aa7.78□□□□□ -1.16
GPNMB-214ENST00000492858 DNAJC30Q96LL9 226 aa7.78□□□□□ -1.16
GPNMB-214ENST00000492858 SLC39A9Q9NUM3 307 aa7.78□□□□□ -1.16
GPNMB-214ENST00000492858 BORCS7-ASMTA0A0B4J1R7 106 aa7.77□□□□□ -1.17
GPNMB-214ENST00000492858 IGHV3-73A0A0B4J1V6 119 aa7.77□□□□□ -1.17
GPNMB-214ENST00000492858 TRBV6-4A0A1B0GX49 114 aa7.77□□□□□ -1.17
GPNMB-214ENST00000492858 ODF1Q14990 250 aa7.77□□□□□ -1.17
GPNMB-214ENST00000492858 Q6AWC8 147 aa7.77□□□□□ -1.17
GPNMB-214ENST00000492858 SLC51BQ86UW2 128 aa7.77□□□□□ -1.17
GPNMB-214ENST00000492858 KRTAP9-2Q9BYQ4 174 aa7.77□□□□□ -1.17
GPNMB-214ENST00000492858 KCNIP2Q9NS61 270 aa7.77□□□□□ -1.17
GPNMB-214ENST00000492858 KANTRA0A1W2PQU2 76 aa7.76□□□□□ -1.17
GPNMB-214ENST00000492858 C17orf112F2Z3M2 114 aa7.76□□□□□ -1.17
GPNMB-214ENST00000492858 GNRH2O43555 120 aa7.76□□□□□ -1.17
GPNMB-214ENST00000492858 SEC11BP0C7V7 166 aa7.76□□□□□ -1.17
GPNMB-214ENST00000492858 SCGB1C1Q8TD33 95 aa7.76□□□□□ -1.17
GPNMB-214ENST00000492858 OR10J4P0C629 311 aa7.75□□□□□ -1.17
GPNMB-214ENST00000492858 NKX2-5P52952 324 aaPredicted RBP7.75□□□□□ -1.17
GPNMB-214ENST00000492858 EIF5AP63241 154 aaKnown RBP7.75□□□□□ -1.17
GPNMB-214ENST00000492858 FAM167A-AS1Q96KT0 104 aa7.75□□□□□ -1.17
GPNMB-214ENST00000492858 SH3BGRL3Q9H299 93 aa7.75□□□□□ -1.17
GPNMB-214ENST00000492858 DPH3P1Q9H4G8 78 aa7.75□□□□□ -1.17
GPNMB-214ENST00000492858 C14orf177Q52M58 125 aa7.74□□□□□ -1.17
GPNMB-214ENST00000492858 GCSAMLQ5JQS6 135 aa7.74□□□□□ -1.17
GPNMB-214ENST00000492858 CFAP126Q5VTH2 177 aa7.74□□□□□ -1.17
GPNMB-214ENST00000492858 HSD17B11Q8NBQ5 300 aa7.74□□□□□ -1.17
GPNMB-214ENST00000492858 SUN5Q8TC36 379 aa7.74□□□□□ -1.17
GPNMB-214ENST00000492858 UBE2WQ96B02 151 aa7.74□□□□□ -1.17
GPNMB-214ENST00000492858 PHYHIPLQ96FC7 376 aa7.74□□□□□ -1.17
GPNMB-214ENST00000492858 OR51M1Q9H341 326 aa7.74□□□□□ -1.17
GPNMB-214ENST00000492858 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.74□□□□□ -1.17
GPNMB-214ENST00000492858 LPAP08519 4548 aa7.74□□□□□ -1.17
GPNMB-214ENST00000492858 MBP02144 154 aa7.73□□□□□ -1.17
GPNMB-214ENST00000492858 NBEAP1P0C6P0 100 aa7.73□□□□□ -1.17
GPNMB-214ENST00000492858 TPT1P13693 172 aaKnown RBP7.73□□□□□ -1.17
GPNMB-214ENST00000492858 ZNF876PQ49A33 203 aa7.73□□□□□ -1.17
GPNMB-214ENST00000492858 FFAR4Q5NUL3 377 aa7.73□□□□□ -1.17
GPNMB-214ENST00000492858 DPPA3Q6W0C5 159 aa7.73□□□□□ -1.17
GPNMB-214ENST00000492858 ZNF471Q9BX82 626 aaPredicted RBP7.73□□□□□ -1.17
GPNMB-214ENST00000492858 KLK12Q9UKR0 248 aa7.73□□□□□ -1.17
GPNMB-214ENST00000492858 URGCP-MRPS24S4R325 110 aa7.73□□□□□ -1.17
GPNMB-214ENST00000492858 GAGE12JA6NER3 117 aa7.72□□□□□ -1.17
GPNMB-214ENST00000492858 UMAD1C9J7I0 102 aa7.72□□□□□ -1.17
GPNMB-214ENST00000492858 PANO1I0J062 215 aa7.72□□□□□ -1.17
GPNMB-214ENST00000492858 CIDEAO60543 219 aa7.72□□□□□ -1.17
GPNMB-214ENST00000492858 TYMSP04818 313 aa7.72□□□□□ -1.17
GPNMB-214ENST00000492858 CSN1S1P47710 185 aa7.72□□□□□ -1.17
GPNMB-214ENST00000492858 GAGE1Q13065 139 aa7.72□□□□□ -1.17
GPNMB-214ENST00000492858 GAGE4Q13068 117 aa7.72□□□□□ -1.17
GPNMB-214ENST00000492858 GAGE5Q13069 117 aa7.72□□□□□ -1.17
GPNMB-214ENST00000492858 ZNF726P1Q15940 193 aa7.72□□□□□ -1.17
GPNMB-214ENST00000492858 GAGE13Q4V321 117 aa7.72□□□□□ -1.17
GPNMB-214ENST00000492858 SLC25A2Q9BXI2 301 aa7.72□□□□□ -1.17
GPNMB-214ENST00000492858 LENEPQ9Y5L5 61 aa7.72□□□□□ -1.17
GPNMB-214ENST00000492858 RBAKDNA6NC62 111 aa7.71□□□□□ -1.18
GPNMB-214ENST00000492858 STAG3L2P0CL84 134 aa7.71□□□□□ -1.18
GPNMB-214ENST00000492858 STAG3L3P0CL85 134 aa7.71□□□□□ -1.18
GPNMB-214ENST00000492858 MGST1P10620 155 aaKnown RBP7.71□□□□□ -1.18
GPNMB-214ENST00000492858 SULT1A2P50226 295 aa7.71□□□□□ -1.18
GPNMB-214ENST00000492858 MBD3L1Q8WWY6 194 aa7.71□□□□□ -1.18
GPNMB-214ENST00000492858 SDF2L1Q9HCN8 221 aa7.71□□□□□ -1.18
GPNMB-214ENST00000492858 MUC2Q02817 5179 aa7.7□□□□□ -1.18
GPNMB-214ENST00000492858 A0A087WWC5 75 aa7.7□□□□□ -1.18
GPNMB-214ENST00000492858 RAB5CP51148 216 aa7.7□□□□□ -1.18
GPNMB-214ENST00000492858 RAB2AP61019 212 aa7.7□□□□□ -1.18
GPNMB-214ENST00000492858 MIR17HGQ75NE6 70 aa7.7□□□□□ -1.18
GPNMB-214ENST00000492858 NIT1Q86X76 327 aa7.7□□□□□ -1.18
GPNMB-214ENST00000492858 OR10G9Q8NGN4 311 aa7.7□□□□□ -1.18
GPNMB-214ENST00000492858 OR10G7Q8NGN6 311 aa7.7□□□□□ -1.18
GPNMB-214ENST00000492858 LINC01600Q96MT4 127 aa7.7□□□□□ -1.18
GPNMB-214ENST00000492858 TRAV1-1A0A0B4J248 108 aa7.69□□□□□ -1.18
GPNMB-214ENST00000492858 TRAV21A0A0B4J279 112 aa7.69□□□□□ -1.18
GPNMB-214ENST00000492858 LINC00694P0DN24 101 aa7.69□□□□□ -1.18
GPNMB-214ENST00000492858 EIF5AL1Q6IS14 154 aaKnown RBP7.69□□□□□ -1.18
GPNMB-214ENST00000492858 ATRAIDQ6UW56 229 aa7.69□□□□□ -1.18
GPNMB-214ENST00000492858 CYB561D1Q8N8Q1 229 aa7.69□□□□□ -1.18
GPNMB-214ENST00000492858 LYPD6BQ8NI32 183 aa7.69□□□□□ -1.18
GPNMB-214ENST00000492858 TMED6Q8WW62 240 aa7.69□□□□□ -1.18
GPNMB-214ENST00000492858 RAB24Q969Q5 203 aa7.69□□□□□ -1.18
GPNMB-214ENST00000492858 FXYD5Q96DB9 178 aa7.69□□□□□ -1.18
GPNMB-214ENST00000492858 ZC2HC1AQ96GY0 325 aa7.69□□□□□ -1.18
GPNMB-214ENST00000492858 A0A087WX48 190 aa7.68□□□□□ -1.18
GPNMB-214ENST00000492858 CTXND1A0A1B0GTU2 59 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms