RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 NTN5Q8WTR8 489 aaPredicted RBP8.41□□□□□ -1.06
COL6A1-205ENST00000492851 HIST1H2BAQ96A08 127 aa8.41□□□□□ -1.06
COL6A1-205ENST00000492851 GTSF1LQ9H1H1 148 aa8.41□□□□□ -1.06
COL6A1-205ENST00000492851 DNAH5Q8TE73 4624 aa8.41□□□□□ -1.06
COL6A1-205ENST00000492851 CTXND1A0A1B0GTU2 59 aa8.4□□□□□ -1.06
COL6A1-205ENST00000492851 GGTLC3B5MD39 225 aa8.4□□□□□ -1.06
COL6A1-205ENST00000492851 GCSHP23434 173 aa8.4□□□□□ -1.06
COL6A1-205ENST00000492851 ATP6V0E2Q8NHE4 81 aa8.4□□□□□ -1.06
COL6A1-205ENST00000492851 C11orf21Q9P2W6 132 aa8.4□□□□□ -1.06
COL6A1-205ENST00000492851 ABCA13Q86UQ4 5058 aa8.39□□□□□ -1.07
COL6A1-205ENST00000492851 PGPEP1LA6NFU8 196 aa8.39□□□□□ -1.07
COL6A1-205ENST00000492851 RNASE3P12724 160 aaKnown RBP8.39□□□□□ -1.07
COL6A1-205ENST00000492851 ASIPP42127 132 aa8.39□□□□□ -1.07
COL6A1-205ENST00000492851 FGF8P55075 233 aaPredicted RBP8.39□□□□□ -1.07
COL6A1-205ENST00000492851 LAGE3Q14657 143 aa8.39□□□□□ -1.07
COL6A1-205ENST00000492851 ZNF506Q5JVG8 444 aa8.39□□□□□ -1.07
COL6A1-205ENST00000492851 AKR1C8PQ5T2L2 129 aa8.39□□□□□ -1.07
COL6A1-205ENST00000492851 RPL7L1Q6DKI1 246 aaKnown RBP8.39□□□□□ -1.07
COL6A1-205ENST00000492851 TM2D2Q9BX73 214 aa8.39□□□□□ -1.07
COL6A1-205ENST00000492851 ZFP30Q9Y2G7 519 aa8.39□□□□□ -1.07
COL6A1-205ENST00000492851 A0A087WWC5 75 aa8.38□□□□□ -1.07
COL6A1-205ENST00000492851 IGHV3-73A0A0B4J1V6 119 aa8.38□□□□□ -1.07
COL6A1-205ENST00000492851 LGALSLQ3ZCW2 172 aaPredicted RBP8.38□□□□□ -1.07
COL6A1-205ENST00000492851 DPPA3Q6W0C5 159 aa8.38□□□□□ -1.07
COL6A1-205ENST00000492851 SYT8Q8NBV8 401 aa8.38□□□□□ -1.07
COL6A1-205ENST00000492851 FRZBQ92765 325 aa8.38□□□□□ -1.07
COL6A1-205ENST00000492851 TCEAL7Q9BRU2 100 aa8.38□□□□□ -1.07
COL6A1-205ENST00000492851 IL36BQ9NZH7 164 aa8.38□□□□□ -1.07
COL6A1-205ENST00000492851 ARL2-SNX15V9GYD0 113 aa8.38□□□□□ -1.07
COL6A1-205ENST00000492851 FXYD6-FXYD2A0A087WZ82 144 aa8.37□□□□□ -1.07
COL6A1-205ENST00000492851 IGKV3D-20A0A0C4DH25 116 aa8.37□□□□□ -1.07
COL6A1-205ENST00000492851 PEX7O00628 323 aa8.37□□□□□ -1.07
COL6A1-205ENST00000492851 XGP55808 180 aa8.37□□□□□ -1.07
COL6A1-205ENST00000492851 Q5BKY6 102 aa8.37□□□□□ -1.07
COL6A1-205ENST00000492851 TOR2AQ5JU69 321 aa8.37□□□□□ -1.07
COL6A1-205ENST00000492851 OR2T35Q8NGX2 323 aa8.37□□□□□ -1.07
COL6A1-205ENST00000492851 STOML3Q8TAV4 291 aa8.37□□□□□ -1.07
COL6A1-205ENST00000492851 LINC00479Q96M42 142 aa8.37□□□□□ -1.07
COL6A1-205ENST00000492851 PARLQ9H300 379 aa8.37□□□□□ -1.07
COL6A1-205ENST00000492851 IGLV5-52A0A0A0MRZ9 124 aa8.36□□□□□ -1.07
COL6A1-205ENST00000492851 TRAV8-3A0A0A6YYJ7 113 aa8.36□□□□□ -1.07
COL6A1-205ENST00000492851 RNF222A6NCQ9 220 aa8.36□□□□□ -1.07
COL6A1-205ENST00000492851 FAM74A7A6NL05 159 aa8.36□□□□□ -1.07
COL6A1-205ENST00000492851 B4DEV8 164 aa8.36□□□□□ -1.07
COL6A1-205ENST00000492851 RHODO00212 210 aa8.36□□□□□ -1.07
COL6A1-205ENST00000492851 SEC11BP0C7V7 166 aa8.36□□□□□ -1.07
COL6A1-205ENST00000492851 KRTAP10-1P60331 282 aa8.36□□□□□ -1.07
COL6A1-205ENST00000492851 DNLZQ5SXM8 178 aa8.36□□□□□ -1.07
COL6A1-205ENST00000492851 COX8CQ7Z4L0 72 aa8.36□□□□□ -1.07
COL6A1-205ENST00000492851 COX11Q9Y6N1 276 aa8.36□□□□□ -1.07
COL6A1-205ENST00000492851 APOBP04114 4563 aaKnown RBP8.36□□□□□ -1.07
COL6A1-205ENST00000492851 TRAV34A0A0B4J273 112 aa8.35□□□□□ -1.07
COL6A1-205ENST00000492851 LRCOL1A6NCL2 159 aa8.35□□□□□ -1.07
COL6A1-205ENST00000492851 IGHV3-30P01768 117 aa8.35□□□□□ -1.07
COL6A1-205ENST00000492851 IGHV3-33P01772 117 aa8.35□□□□□ -1.07
COL6A1-205ENST00000492851 IGHV3-30-3P0DP02 117 aa8.35□□□□□ -1.07
COL6A1-205ENST00000492851 IGHV3-30-5P0DP03 117 aa8.35□□□□□ -1.07
COL6A1-205ENST00000492851 FHITP49789 147 aa8.35□□□□□ -1.07
COL6A1-205ENST00000492851 UBE2G2P60604 165 aa8.35□□□□□ -1.07
COL6A1-205ENST00000492851 UBE2G1P62253 170 aa8.35□□□□□ -1.07
COL6A1-205ENST00000492851 Q8N814 137 aa8.35□□□□□ -1.07
COL6A1-205ENST00000492851 FMC1Q96HJ9 113 aa8.35□□□□□ -1.07
COL6A1-205ENST00000492851 TMEM70Q9BUB7 260 aa8.35□□□□□ -1.07
COL6A1-205ENST00000492851 TRBV6-1A0A0K0K1D8 114 aa8.34□□□□□ -1.07
COL6A1-205ENST00000492851 KRBOX1C9JBD0 128 aa8.34□□□□□ -1.07
COL6A1-205ENST00000492851 FAM229AH3BQW9 127 aa8.34□□□□□ -1.07
COL6A1-205ENST00000492851 INAFM2P0DMQ5 153 aa8.34□□□□□ -1.07
COL6A1-205ENST00000492851 FUSP35637 526 aaKnown RBP eCLIP8.34□□□□□ -1.07
COL6A1-205ENST00000492851 ZNF726P1Q15940 193 aa8.34□□□□□ -1.07
COL6A1-205ENST00000492851 FAM162BQ5T6X4 162 aa8.34□□□□□ -1.07
COL6A1-205ENST00000492851 Q86TA4 180 aa8.34□□□□□ -1.07
COL6A1-205ENST00000492851 OR11H4Q8NGC9 324 aa8.34□□□□□ -1.07
COL6A1-205ENST00000492851 Q9HAA7 133 aa8.34□□□□□ -1.07
COL6A1-205ENST00000492851 PHLDA3Q9Y5J5 127 aa8.34□□□□□ -1.07
COL6A1-205ENST00000492851 URGCP-MRPS24S4R325 110 aa8.34□□□□□ -1.07
COL6A1-205ENST00000492851 MAP1LC3B2A6NCE7 125 aa8.33□□□□□ -1.08
COL6A1-205ENST00000492851 GAGE12JA6NER3 117 aa8.33□□□□□ -1.08
COL6A1-205ENST00000492851 C1QBP02746 253 aa8.33□□□□□ -1.08
COL6A1-205ENST00000492851 S100A9P06702 114 aaKnown RBP8.33□□□□□ -1.08
COL6A1-205ENST00000492851 ARMS2P0C7Q2 107 aa8.33□□□□□ -1.08
COL6A1-205ENST00000492851 GAGE1Q13065 139 aa8.33□□□□□ -1.08
COL6A1-205ENST00000492851 GAGE4Q13068 117 aa8.33□□□□□ -1.08
COL6A1-205ENST00000492851 GAGE5Q13069 117 aa8.33□□□□□ -1.08
COL6A1-205ENST00000492851 GAGE13Q4V321 117 aa8.33□□□□□ -1.08
COL6A1-205ENST00000492851 DMRTA1Q5VZB9 504 aa8.33□□□□□ -1.08
COL6A1-205ENST00000492851 RMI2Q96E14 147 aa8.33□□□□□ -1.08
COL6A1-205ENST00000492851 MAP1LC3BQ9GZQ8 125 aa8.33□□□□□ -1.08
COL6A1-205ENST00000492851 H3BVH4 76 aa8.32□□□□□ -1.08
COL6A1-205ENST00000492851 ARPC5O15511 151 aa8.32□□□□□ -1.08
COL6A1-205ENST00000492851 TPT1P13693 172 aaKnown RBP8.32□□□□□ -1.08
COL6A1-205ENST00000492851 CRIP1P50238 77 aa8.32□□□□□ -1.08
COL6A1-205ENST00000492851 ZNF674Q2M3X9 581 aa8.32□□□□□ -1.08
COL6A1-205ENST00000492851 RGS21Q2M5E4 152 aa8.32□□□□□ -1.08
COL6A1-205ENST00000492851 Q5VSD8 79 aa8.32□□□□□ -1.08
COL6A1-205ENST00000492851 Q6ZSN1 163 aa8.32□□□□□ -1.08
COL6A1-205ENST00000492851 TRBV10-1A0A0K0K1A3 114 aa8.31□□□□□ -1.08
COL6A1-205ENST00000492851 UMAD1C9J7I0 102 aa8.31□□□□□ -1.08
COL6A1-205ENST00000492851 M0R036 132 aa8.31□□□□□ -1.08
COL6A1-205ENST00000492851 SH2D1AO60880 128 aa8.31□□□□□ -1.08
COL6A1-205ENST00000492851 LINC00694P0DN24 101 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms