RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 NDUFA4O00483 81 aa7.7□□□□□ -1.18
HDAC9-225ENST00000490851 ZNF253O75346 499 aa7.7□□□□□ -1.18
HDAC9-225ENST00000490851 IGKV2D-40P01614 121 aaPredicted RBP7.7□□□□□ -1.18
HDAC9-225ENST00000490851 MT-ATP8P03928 68 aa7.7□□□□□ -1.18
HDAC9-225ENST00000490851 KHDC1LQ5JSQ8 128 aa7.7□□□□□ -1.18
HDAC9-225ENST00000490851 Q86TA4 180 aa7.7□□□□□ -1.18
HDAC9-225ENST00000490851 FMC1Q96HJ9 113 aa7.7□□□□□ -1.18
HDAC9-225ENST00000490851 SPINK4O60575 86 aa7.7□□□□□ -1.18
HDAC9-225ENST00000490851 XGP55808 180 aa7.7□□□□□ -1.18
HDAC9-225ENST00000490851 PDE6HQ13956 83 aa7.7□□□□□ -1.18
HDAC9-225ENST00000490851 MEIG1Q5JSS6 88 aa7.7□□□□□ -1.18
HDAC9-225ENST00000490851 OR10AG1Q8NH19 301 aa7.7□□□□□ -1.18
HDAC9-225ENST00000490851 KLF12Q9Y4X4 402 aa7.7□□□□□ -1.18
HDAC9-225ENST00000490851 V9GYV3 84 aa7.7□□□□□ -1.18
HDAC9-225ENST00000490851 SETXQ7Z333 2677 aaKnown RBP7.69□□□□□ -1.18
HDAC9-225ENST00000490851 HIVEP1P15822 2718 aa7.69□□□□□ -1.18
HDAC9-225ENST00000490851 LINC00694P0DN24 101 aa7.69□□□□□ -1.18
HDAC9-225ENST00000490851 CSN1S1P47710 185 aa7.69□□□□□ -1.18
HDAC9-225ENST00000490851 RPL11P62913 178 aaKnown RBP7.69□□□□□ -1.18
HDAC9-225ENST00000490851 Q6Q795 121 aa7.69□□□□□ -1.18
HDAC9-225ENST00000490851 LYPD1Q8N2G4 141 aa7.69□□□□□ -1.18
HDAC9-225ENST00000490851 SPCS1Q9Y6A9 102 aa7.69□□□□□ -1.18
HDAC9-225ENST00000490851 IGLV2-11P01706 119 aa7.69□□□□□ -1.18
HDAC9-225ENST00000490851 Q0VG73 95 aa7.69□□□□□ -1.18
HDAC9-225ENST00000490851 RPEL1Q2QD12 228 aa7.69□□□□□ -1.18
HDAC9-225ENST00000490851 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.69□□□□□ -1.18
HDAC9-225ENST00000490851 C18orf65Q6ZTR6 163 aa7.69□□□□□ -1.18
HDAC9-225ENST00000490851 PRADC1Q9BSG0 188 aa7.69□□□□□ -1.18
HDAC9-225ENST00000490851 MDFICQ9P1T7 246 aa7.69□□□□□ -1.18
HDAC9-225ENST00000490851 ZNF580Q9UK33 172 aa7.69□□□□□ -1.18
HDAC9-225ENST00000490851 NSD1Q96L73 2696 aaPredicted RBP7.68□□□□□ -1.18
HDAC9-225ENST00000490851 CHEK1O14757 476 aa7.68□□□□□ -1.18
HDAC9-225ENST00000490851 NUPR1O60356 82 aa7.68□□□□□ -1.18
HDAC9-225ENST00000490851 LTAP01374 205 aa7.68□□□□□ -1.18
HDAC9-225ENST00000490851 PMVKQ15126 192 aa7.68□□□□□ -1.18
HDAC9-225ENST00000490851 DEFB136Q30KP8 78 aa7.68□□□□□ -1.18
HDAC9-225ENST00000490851 Q8TAT8 98 aa7.68□□□□□ -1.18
HDAC9-225ENST00000490851 TMEM190Q8WZ59 177 aa7.68□□□□□ -1.18
HDAC9-225ENST00000490851 ZNF331Q9NQX6 463 aaPredicted RBP7.68□□□□□ -1.18
HDAC9-225ENST00000490851 IL36BQ9NZH7 164 aa7.68□□□□□ -1.18
HDAC9-225ENST00000490851 C4orf26Q17RF5 130 aa7.68□□□□□ -1.18
HDAC9-225ENST00000490851 LINC00322Q6ZN03 302 aaPredicted RBP7.68□□□□□ -1.18
HDAC9-225ENST00000490851 TMEM86BQ8N661 226 aa7.68□□□□□ -1.18
HDAC9-225ENST00000490851 C11orf44Q8N8P7 122 aa7.68□□□□□ -1.18
HDAC9-225ENST00000490851 OSTCQ9NRP0 149 aa7.68□□□□□ -1.18
HDAC9-225ENST00000490851 U3KQE9 123 aa7.68□□□□□ -1.18
HDAC9-225ENST00000490851 PRAC2D3DTV9 90 aa7.67□□□□□ -1.18
HDAC9-225ENST00000490851 RASL11AQ6T310 242 aa7.67□□□□□ -1.18
HDAC9-225ENST00000490851 Q6ZSV7 163 aa7.67□□□□□ -1.18
HDAC9-225ENST00000490851 C20orf173Q96LM9 149 aa7.67□□□□□ -1.18
HDAC9-225ENST00000490851 C8orf49Q96NF6 230 aa7.67□□□□□ -1.18
HDAC9-225ENST00000490851 WNK1Q9H4A3 2382 aa7.67□□□□□ -1.18
HDAC9-225ENST00000490851 IGHV4OR15-8A0A075B7B6 117 aa7.67□□□□□ -1.18
HDAC9-225ENST00000490851 A0A087WW49 117 aa7.67□□□□□ -1.18
HDAC9-225ENST00000490851 A0A1W2PPM0 123 aa7.67□□□□□ -1.18
HDAC9-225ENST00000490851 LY6G6DO95868 133 aa7.67□□□□□ -1.18
HDAC9-225ENST00000490851 ELANEP08246 267 aa7.67□□□□□ -1.18
HDAC9-225ENST00000490851 ERCC8Q13216 396 aa7.67□□□□□ -1.18
HDAC9-225ENST00000490851 LCN12Q6JVE5 192 aa7.67□□□□□ -1.18
HDAC9-225ENST00000490851 TMEM75Q8N9X5 138 aa7.67□□□□□ -1.18
HDAC9-225ENST00000490851 ATP6V0E2Q8NHE4 81 aa7.67□□□□□ -1.18
HDAC9-225ENST00000490851 ZC2HC1AQ96GY0 325 aa7.67□□□□□ -1.18
HDAC9-225ENST00000490851 LINC00477Q96M19 166 aa7.67□□□□□ -1.18
HDAC9-225ENST00000490851 VGLL1Q99990 258 aa7.67□□□□□ -1.18
HDAC9-225ENST00000490851 MLST8Q9BVC4 326 aa7.67□□□□□ -1.18
HDAC9-225ENST00000490851 RHPN1-AS1Q9BWJ2 59 aa7.67□□□□□ -1.18
HDAC9-225ENST00000490851 DAZ1Q9NQZ3 744 aaKnown RBP7.67□□□□□ -1.18
HDAC9-225ENST00000490851 LOC107984640A0A0U1RRK4 108 aa7.66□□□□□ -1.18
HDAC9-225ENST00000490851 FRMD6-AS1P0C7T7 363 aa7.66□□□□□ -1.18
HDAC9-225ENST00000490851 IFITM1P13164 125 aa7.66□□□□□ -1.18
HDAC9-225ENST00000490851 SYNJ2BPP57105 145 aa7.66□□□□□ -1.18
HDAC9-225ENST00000490851 STHQ8IWL8 128 aa7.66□□□□□ -1.18
HDAC9-225ENST00000490851 C16orf92Q96LL3 132 aa7.66□□□□□ -1.18
HDAC9-225ENST00000490851 LINC01587Q99440 93 aa7.66□□□□□ -1.18
HDAC9-225ENST00000490851 A0A087X0K7 114 aa7.66□□□□□ -1.18
HDAC9-225ENST00000490851 TRAV8-2A0A0B4J237 113 aa7.66□□□□□ -1.18
HDAC9-225ENST00000490851 IGHV7-4-1A0A0J9YVY3 117 aa7.66□□□□□ -1.18
HDAC9-225ENST00000490851 LGALS1P09382 135 aaKnown RBP7.66□□□□□ -1.18
HDAC9-225ENST00000490851 FABP2P12104 132 aa7.66□□□□□ -1.18
HDAC9-225ENST00000490851 RPL35AP18077 110 aaKnown RBP7.66□□□□□ -1.18
HDAC9-225ENST00000490851 Q8N2B8 174 aa7.66□□□□□ -1.18
HDAC9-225ENST00000490851 NIPBLQ6KC79 2804 aaeCLIP7.65□□□□□ -1.18
HDAC9-225ENST00000490851 P01737 135 aa7.65□□□□□ -1.18
HDAC9-225ENST00000490851 KRTDAPP60985 99 aa7.65□□□□□ -1.18
HDAC9-225ENST00000490851 FOXI1Q12951 378 aa7.65□□□□□ -1.18
HDAC9-225ENST00000490851 TAL2Q16559 108 aa7.65□□□□□ -1.18
HDAC9-225ENST00000490851 CT83Q5H943 113 aa7.65□□□□□ -1.18
HDAC9-225ENST00000490851 C18orf32Q8TCD1 76 aa7.65□□□□□ -1.18
HDAC9-225ENST00000490851 A0A1W2PS18 150 aa7.64□□□□□ -1.19
HDAC9-225ENST00000490851 GPX1P07203 203 aa7.64□□□□□ -1.19
HDAC9-225ENST00000490851 CBLN1P23435 193 aa7.64□□□□□ -1.19
HDAC9-225ENST00000490851 HOXD3P31249 432 aaPredicted RBP7.64□□□□□ -1.19
HDAC9-225ENST00000490851 DEFB1P60022 68 aa7.64□□□□□ -1.19
HDAC9-225ENST00000490851 DGAT2L7PQ6IED9 249 aa7.64□□□□□ -1.19
HDAC9-225ENST00000490851 UBE2E2Q96LR5 201 aa7.64□□□□□ -1.19
HDAC9-225ENST00000490851 SLC50A1Q9BRV3 221 aa7.64□□□□□ -1.19
HDAC9-225ENST00000490851 HAX1O00165 279 aa7.64□□□□□ -1.19
HDAC9-225ENST00000490851 SLURP1P55000 103 aa7.64□□□□□ -1.19
HDAC9-225ENST00000490851 WFDC3Q8IUB2 231 aa7.64□□□□□ -1.19
HDAC9-225ENST00000490851 RPP21Q9H633 154 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms